RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 Q6ZVH6 145 aa8.86□□□□□ -0.99
SGCE-204ENST00000428696 HIST1H4GQ99525 98 aa8.86□□□□□ -0.99
SGCE-204ENST00000428696 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
SGCE-204ENST00000428696 A6NDN8 102 aa8.84□□□□□ -0.99
SGCE-204ENST00000428696 H0Y9J4 135 aa8.84□□□□□ -0.99
SGCE-204ENST00000428696 PRYO14603 147 aa8.84□□□□□ -0.99
SGCE-204ENST00000428696 SLC25A34Q6PIV7 304 aa8.84□□□□□ -0.99
SGCE-204ENST00000428696 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
SGCE-204ENST00000428696 OXTP01178 125 aa8.83□□□□□ -1
SGCE-204ENST00000428696 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
SGCE-204ENST00000428696 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
SGCE-204ENST00000428696 MYCBP2O75592 4640 aa8.83□□□□□ -1
SGCE-204ENST00000428696 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
SGCE-204ENST00000428696 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
SGCE-204ENST00000428696 IGLV6-57P01721 117 aa8.82□□□□□ -1
SGCE-204ENST00000428696 HIGD2AQ9BW72 106 aa8.82□□□□□ -1
SGCE-204ENST00000428696 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
SGCE-204ENST00000428696 DLEU1O43261 78 aa8.81□□□□□ -1
SGCE-204ENST00000428696 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
SGCE-204ENST00000428696 LINC00337Q8N6G1 96 aa8.8□□□□□ -1
SGCE-204ENST00000428696 CBY1Q9Y3M2 126 aa8.8□□□□□ -1
SGCE-204ENST00000428696 A4D1N5 150 aa8.78□□□□□ -1
SGCE-204ENST00000428696 ZNF73O43830 326 aaPredicted RBP8.78□□□□□ -1
SGCE-204ENST00000428696 C12orf57Q99622 126 aa8.78□□□□□ -1
SGCE-204ENST00000428696 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
SGCE-204ENST00000428696 LINC01600Q96MT4 127 aa8.77□□□□□ -1.01
SGCE-204ENST00000428696 LRP1Q07954 4544 aaKnown RBP8.77□□□□□ -1.01
SGCE-204ENST00000428696 TRAV13-2A0A0B4J235 113 aa8.76□□□□□ -1.01
SGCE-204ENST00000428696 SPRR1AP35321 89 aa8.76□□□□□ -1.01
SGCE-204ENST00000428696 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
SGCE-204ENST00000428696 DMBT1Q9UGM3 2413 aaPredicted RBP8.76□□□□□ -1.01
SGCE-204ENST00000428696 B5MCH6 92 aa8.75□□□□□ -1.01
SGCE-204ENST00000428696 PRR26Q8N8Z3 221 aa8.75□□□□□ -1.01
SGCE-204ENST00000428696 SMCR5Q8TEV8 140 aa8.75□□□□□ -1.01
SGCE-204ENST00000428696 C2orf91Q6ZV80 131 aa8.74□□□□□ -1.01
SGCE-204ENST00000428696 PPDPFQ9H3Y8 114 aa8.74□□□□□ -1.01
SGCE-204ENST00000428696 HIGD1BQ9P298 99 aa8.74□□□□□ -1.01
SGCE-204ENST00000428696 KRTAP4-16G5E9R7 235 aaPredicted RBP8.73□□□□□ -1.01
SGCE-204ENST00000428696 LCE3BQ5TA77 95 aa8.73□□□□□ -1.01
SGCE-204ENST00000428696 C6orf99Q4VX62 202 aa8.72□□□□□ -1.01
SGCE-204ENST00000428696 Q6ZRX8 168 aa8.71□□□□□ -1.01
SGCE-204ENST00000428696 PRO1933Q9H354 126 aa8.71□□□□□ -1.01
SGCE-204ENST00000428696 UQCR10Q9UDW1 63 aa8.71□□□□□ -1.01
SGCE-204ENST00000428696 FAT3Q8TDW7 4589 aa8.71□□□□□ -1.02
SGCE-204ENST00000428696 H7C2G1 150 aa8.71□□□□□ -1.02
SGCE-204ENST00000428696 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.02
SGCE-204ENST00000428696 MT1HL1P0DM35 61 aa8.71□□□□□ -1.02
SGCE-204ENST00000428696 COX7BP24311 80 aa8.71□□□□□ -1.02
SGCE-204ENST00000428696 RPL13AP40429 203 aaKnown RBP8.7□□□□□ -1.02
SGCE-204ENST00000428696 SMIM11BQ8TCY0 68 aa8.7□□□□□ -1.02
SGCE-204ENST00000428696 RAB37Q96AX2 223 aa8.7□□□□□ -1.02
SGCE-204ENST00000428696 ERC2-IT1O76042 136 aa8.69□□□□□ -1.02
SGCE-204ENST00000428696 CRYGAP11844 174 aa8.69□□□□□ -1.02
SGCE-204ENST00000428696 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
SGCE-204ENST00000428696 CEND1Q8N111 149 aa8.69□□□□□ -1.02
SGCE-204ENST00000428696 Q9BRP9 147 aa8.69□□□□□ -1.02
SGCE-204ENST00000428696 ZNF706Q9Y5V0 76 aaPredicted RBP8.69□□□□□ -1.02
SGCE-204ENST00000428696 LOC105371267A0A1B0GV96 52 aa8.68□□□□□ -1.02
SGCE-204ENST00000428696 TAL2Q16559 108 aa8.68□□□□□ -1.02
SGCE-204ENST00000428696 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
SGCE-204ENST00000428696 KRTAP4-12Q9BQ66 201 aa8.68□□□□□ -1.02
SGCE-204ENST00000428696 SMIM6P0DI80 62 aa8.67□□□□□ -1.02
SGCE-204ENST00000428696 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
SGCE-204ENST00000428696 A0A087X002 238 aa8.66□□□□□ -1.02
SGCE-204ENST00000428696 CFC1BP0CG36 223 aa8.66□□□□□ -1.02
SGCE-204ENST00000428696 CFC1P0CG37 223 aa8.66□□□□□ -1.02
SGCE-204ENST00000428696 VAMP3Q15836 100 aa8.66□□□□□ -1.02
SGCE-204ENST00000428696 TYMSOSQ8TAI1 123 aa8.66□□□□□ -1.02
SGCE-204ENST00000428696 HSD52Q0P140 79 aa8.65□□□□□ -1.02
SGCE-204ENST00000428696 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.02
SGCE-204ENST00000428696 ELOF1P60002 83 aaKnown RBP8.64□□□□□ -1.03
SGCE-204ENST00000428696 ST20-AS1Q8NBB2 130 aa8.64□□□□□ -1.03
SGCE-204ENST00000428696 DEFB105AQ8NG35 78 aa8.64□□□□□ -1.03
SGCE-204ENST00000428696 A0A1B0GWB2 263 aa8.63□□□□□ -1.03
SGCE-204ENST00000428696 FXYD2P54710 66 aa8.63□□□□□ -1.03
SGCE-204ENST00000428696 Q1RN00 199 aa8.63□□□□□ -1.03
SGCE-204ENST00000428696 TRBV7-6A0A0J9YX20 115 aa8.63□□□□□ -1.03
SGCE-204ENST00000428696 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
SGCE-204ENST00000428696 NHP2Q9NX24 153 aaKnown RBP8.62□□□□□ -1.03
SGCE-204ENST00000428696 SLC25A20O43772 301 aa8.61□□□□□ -1.03
SGCE-204ENST00000428696 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
SGCE-204ENST00000428696 IGLV9-49A0A0B4J1Y8 123 aa8.6□□□□□ -1.03
SGCE-204ENST00000428696 A0A0B4J2C4 111 aa8.6□□□□□ -1.03
SGCE-204ENST00000428696 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
SGCE-204ENST00000428696 TNXBP22105 4242 aa8.6□□□□□ -1.03
SGCE-204ENST00000428696 TSPAN13O95857 204 aa8.59□□□□□ -1.03
SGCE-204ENST00000428696 KRTAP13-2Q52LG2 175 aa8.59□□□□□ -1.03
SGCE-204ENST00000428696 KRTAP9-9Q9BYP9 154 aa8.59□□□□□ -1.03
SGCE-204ENST00000428696 KRTAP9-4Q9BYQ2 154 aa8.59□□□□□ -1.03
SGCE-204ENST00000428696 HERC1Q15751 4861 aa8.59□□□□□ -1.03
SGCE-204ENST00000428696 K7ERJ3 54 aa8.58□□□□□ -1.04
SGCE-204ENST00000428696 CTAG1AP78358 180 aa8.58□□□□□ -1.04
SGCE-204ENST00000428696 TSTD3H0UI37 97 aa8.57□□□□□ -1.04
SGCE-204ENST00000428696 BVES-AS1Q5T3Y7 98 aa8.56□□□□□ -1.04
SGCE-204ENST00000428696 PSMB2P49721 201 aa8.55□□□□□ -1.04
SGCE-204ENST00000428696 LINC00483Q53H64 154 aa8.55□□□□□ -1.04
SGCE-204ENST00000428696 C9orf153Q5TBE3 101 aa8.55□□□□□ -1.04
SGCE-204ENST00000428696 KRTAP4-8A0A0G2JLE6 195 aa8.54□□□□□ -1.04
SGCE-204ENST00000428696 hADV29S1A0JD25 119 aa8.54□□□□□ -1.04
SGCE-204ENST00000428696 MOBPQ13875 183 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms