RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 NPC2P61916 151 aa9.04□□□□□ -0.96
HLA-DQB2-230ENST00000427449 FAT4Q6V0I7 4981 aa9.03□□□□□ -0.96
HLA-DQB2-230ENST00000427449 TIMM17BO60830 172 aa9.02□□□□□ -0.97
HLA-DQB2-230ENST00000427449 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
HLA-DQB2-230ENST00000427449 PET117Q6UWS5 81 aa9.02□□□□□ -0.97
HLA-DQB2-230ENST00000427449 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
HLA-DQB2-230ENST00000427449 IGLV7-46A0A075B6I9 117 aa9.01□□□□□ -0.97
HLA-DQB2-230ENST00000427449 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
HLA-DQB2-230ENST00000427449 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
HLA-DQB2-230ENST00000427449 ZNF73O43830 326 aaPredicted RBP8.99□□□□□ -0.97
HLA-DQB2-230ENST00000427449 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
HLA-DQB2-230ENST00000427449 GAGE2AQ6NT46 116 aa8.99□□□□□ -0.97
HLA-DQB2-230ENST00000427449 MOBPQ13875 183 aa8.98□□□□□ -0.97
HLA-DQB2-230ENST00000427449 Q8N377 158 aa8.98□□□□□ -0.97
HLA-DQB2-230ENST00000427449 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
HLA-DQB2-230ENST00000427449 MIEN1Q9BRT3 115 aa8.98□□□□□ -0.97
HLA-DQB2-230ENST00000427449 SPANXCQ9NY87 97 aa8.98□□□□□ -0.97
HLA-DQB2-230ENST00000427449 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
HLA-DQB2-230ENST00000427449 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
HLA-DQB2-230ENST00000427449 ZNF815PA8K554 130 aa8.95□□□□□ -0.98
HLA-DQB2-230ENST00000427449 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
HLA-DQB2-230ENST00000427449 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
HLA-DQB2-230ENST00000427449 IGLV9-49A0A0B4J1Y8 123 aa8.94□□□□□ -0.98
HLA-DQB2-230ENST00000427449 SPINK1P00995 79 aa8.94□□□□□ -0.98
HLA-DQB2-230ENST00000427449 SPRR1BP22528 89 aa8.94□□□□□ -0.98
HLA-DQB2-230ENST00000427449 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
HLA-DQB2-230ENST00000427449 KRTAP4-1Q9BYQ7 146 aa8.93□□□□□ -0.98
HLA-DQB2-230ENST00000427449 SSBP3-AS1Q7Z2R9 100 aa8.92□□□□□ -0.98
HLA-DQB2-230ENST00000427449 KRTDAPP60985 99 aa8.91□□□□□ -0.98
HLA-DQB2-230ENST00000427449 S100A12P80511 92 aa8.91□□□□□ -0.98
HLA-DQB2-230ENST00000427449 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
HLA-DQB2-230ENST00000427449 ELOF1P60002 83 aaKnown RBP8.9□□□□□ -0.98
HLA-DQB2-230ENST00000427449 PCP2Q8IVA1 136 aa8.9□□□□□ -0.98
HLA-DQB2-230ENST00000427449 C5orf52A6NGY3 159 aa8.89□□□□□ -0.99
HLA-DQB2-230ENST00000427449 ATOH7Q8N100 152 aa8.89□□□□□ -0.99
HLA-DQB2-230ENST00000427449 JOSD1Q15040 202 aaPredicted RBP8.88□□□□□ -0.99
HLA-DQB2-230ENST00000427449 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
HLA-DQB2-230ENST00000427449 C6orf99Q4VX62 202 aa8.86□□□□□ -0.99
HLA-DQB2-230ENST00000427449 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
HLA-DQB2-230ENST00000427449 C4orf48Q5BLP8 95 aa8.85□□□□□ -0.99
HLA-DQB2-230ENST00000427449 HIST3H2BBQ8N257 126 aa8.85□□□□□ -0.99
HLA-DQB2-230ENST00000427449 SMIM29Q86T20 159 aa8.84□□□□□ -0.99
HLA-DQB2-230ENST00000427449 OR13C6PQ8NH95 151 aa8.83□□□□□ -1
HLA-DQB2-230ENST00000427449 HIST1H2BLQ99880 126 aa8.83□□□□□ -1
HLA-DQB2-230ENST00000427449 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
HLA-DQB2-230ENST00000427449 C9orf153Q5TBE3 101 aa8.82□□□□□ -1
HLA-DQB2-230ENST00000427449 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
HLA-DQB2-230ENST00000427449 COX7BP24311 80 aa8.81□□□□□ -1
HLA-DQB2-230ENST00000427449 XP32Q5T750 250 aa8.81□□□□□ -1
HLA-DQB2-230ENST00000427449 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
HLA-DQB2-230ENST00000427449 LINC00518Q8N0U6 118 aa8.81□□□□□ -1
HLA-DQB2-230ENST00000427449 CBY1Q9Y3M2 126 aa8.81□□□□□ -1
HLA-DQB2-230ENST00000427449 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
HLA-DQB2-230ENST00000427449 SLC25A20O43772 301 aa8.8□□□□□ -1
HLA-DQB2-230ENST00000427449 IFITM1P13164 125 aa8.8□□□□□ -1
HLA-DQB2-230ENST00000427449 C20orf202A1L168 122 aa8.79□□□□□ -1
HLA-DQB2-230ENST00000427449 SCGB1D4Q6XE38 83 aa8.79□□□□□ -1
HLA-DQB2-230ENST00000427449 A0A0U1RQV1 116 aa8.78□□□□□ -1
HLA-DQB2-230ENST00000427449 Q6ZVH6 145 aa8.78□□□□□ -1
HLA-DQB2-230ENST00000427449 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
HLA-DQB2-230ENST00000427449 KRTAP19-2Q3LHN2 52 aa8.76□□□□□ -1.01
HLA-DQB2-230ENST00000427449 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
HLA-DQB2-230ENST00000427449 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
HLA-DQB2-230ENST00000427449 A0A0G2JQZ4 141 aa8.74□□□□□ -1.01
HLA-DQB2-230ENST00000427449 Q1RN00 199 aa8.74□□□□□ -1.01
HLA-DQB2-230ENST00000427449 KRTAP9-2Q9BYQ4 174 aa8.74□□□□□ -1.01
HLA-DQB2-230ENST00000427449 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
HLA-DQB2-230ENST00000427449 SNRPEP62304 92 aaKnown RBP8.72□□□□□ -1.01
HLA-DQB2-230ENST00000427449 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
HLA-DQB2-230ENST00000427449 CD164Q04900 197 aa8.71□□□□□ -1.02
HLA-DQB2-230ENST00000427449 Q5XG85 94 aa8.71□□□□□ -1.02
HLA-DQB2-230ENST00000427449 HRCT1Q6UXD1 115 aa8.71□□□□□ -1.02
HLA-DQB2-230ENST00000427449 LAMTOR3Q9UHA4 124 aa8.71□□□□□ -1.02
HLA-DQB2-230ENST00000427449 A6NDN8 102 aa8.7□□□□□ -1.02
HLA-DQB2-230ENST00000427449 AKR1D1P51857 326 aa8.7□□□□□ -1.02
HLA-DQB2-230ENST00000427449 SLC25A34Q6PIV7 304 aa8.7□□□□□ -1.02
HLA-DQB2-230ENST00000427449 DEFB105AQ8NG35 78 aa8.69□□□□□ -1.02
HLA-DQB2-230ENST00000427449 COPS9Q8WXC6 57 aa8.69□□□□□ -1.02
HLA-DQB2-230ENST00000427449 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
HLA-DQB2-230ENST00000427449 A4D1N5 150 aa8.68□□□□□ -1.02
HLA-DQB2-230ENST00000427449 S100A1P23297 94 aa8.67□□□□□ -1.02
HLA-DQB2-230ENST00000427449 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
HLA-DQB2-230ENST00000427449 TAL2Q16559 108 aa8.67□□□□□ -1.02
HLA-DQB2-230ENST00000427449 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
HLA-DQB2-230ENST00000427449 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
HLA-DQB2-230ENST00000427449 C1orf195Q5TG92 126 aa8.65□□□□□ -1.02
HLA-DQB2-230ENST00000427449 LINC00575Q6W349 94 aa8.65□□□□□ -1.02
HLA-DQB2-230ENST00000427449 H7C2G1 150 aa8.64□□□□□ -1.03
HLA-DQB2-230ENST00000427449 S100A2P29034 98 aa8.63□□□□□ -1.03
HLA-DQB2-230ENST00000427449 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
HLA-DQB2-230ENST00000427449 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
HLA-DQB2-230ENST00000427449 COX8AP10176 69 aa8.61□□□□□ -1.03
HLA-DQB2-230ENST00000427449 Q6ZQY7 126 aa8.59□□□□□ -1.03
HLA-DQB2-230ENST00000427449 C12orf57Q99622 126 aa8.59□□□□□ -1.03
HLA-DQB2-230ENST00000427449 DLEU1O43261 78 aa8.58□□□□□ -1.04
HLA-DQB2-230ENST00000427449 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
HLA-DQB2-230ENST00000427449 C2orf91Q6ZV80 131 aa8.58□□□□□ -1.04
HLA-DQB2-230ENST00000427449 NHP2Q9NX24 153 aaKnown RBP8.58□□□□□ -1.04
HLA-DQB2-230ENST00000427449 FLGP20930 4061 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQB2-230ENST00000427449 HSBP1L1C9JCN9 74 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms