RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 REG3AQ06141 175 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 SPAG11BQ08648 103 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 Q8N814 137 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 C22orf24Q9Y442 160 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 KMT2BQ9UMN6 2715 aaPredicted RBP3.29□□□□□ -1.88
LINC00458-202ENST00000427299 ITPR3Q14573 2671 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 PTPN13Q12923 2485 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 CHD6Q8TD26 2715 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
LINC00458-202ENST00000427299 NCR3O14931 201 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 LELP1Q5T871 98 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 WFDC11Q8NEX6 87 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 DIRC1Q969H9 104 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 DSCR8Q96T75 97 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 LINC00846Q9NV44 126 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 FBN2P35556 2912 aa3.28□□□□□ -1.88
LINC00458-202ENST00000427299 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
LINC00458-202ENST00000427299 TRBV7-6A0A0J9YX20 115 aa3.27□□□□□ -1.89
LINC00458-202ENST00000427299 ATP5EP56381 51 aaPredicted RBP3.27□□□□□ -1.89
LINC00458-202ENST00000427299 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
LINC00458-202ENST00000427299 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
LINC00458-202ENST00000427299 KIAA0087Q14695 138 aa3.27□□□□□ -1.89
LINC00458-202ENST00000427299 C6orf99Q4VX62 202 aa3.27□□□□□ -1.89
LINC00458-202ENST00000427299 CLPSL2Q6UWE3 100 aa3.27□□□□□ -1.89
LINC00458-202ENST00000427299 V9GYY9 64 aa3.27□□□□□ -1.89
LINC00458-202ENST00000427299 FLNAP21333 2647 aaKnown RBP3.27□□□□□ -1.89
LINC00458-202ENST00000427299 CSMD2Q7Z408 3487 aa3.27□□□□□ -1.89
LINC00458-202ENST00000427299 USP24Q9UPU5 2620 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 TEX15Q9BXT5 2789 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 TRAV23DV6A0A075B6W5 121 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 PRB1P04280 392 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.26□□□□□ -1.89
LINC00458-202ENST00000427299 LINC00575Q6W349 94 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 LINC00269Q8N2A0 174 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 UPK3BQ9BT76 320 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 LAMTOR3Q9UHA4 124 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 ZNF469Q96JG9 3925 aaPredicted RBP3.26□□□□□ -1.89
LINC00458-202ENST00000427299 ZNF462Q96JM2 2506 aa3.26□□□□□ -1.89
LINC00458-202ENST00000427299 POLQO75417 2590 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 JMJD1CQ15652 2540 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 IGLV6-57P01721 117 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 SPART-AS1P0CW21 52 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 DEFB135Q30KP9 77 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 CASC10Q5T4H9 136 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 LYPD5Q6UWN5 251 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 Q6ZQT0 140 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 C7orf33Q8WU49 177 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 ABCA12Q86UK0 2595 aa3.25□□□□□ -1.89
LINC00458-202ENST00000427299 SONP18583 2426 aaKnown RBP3.24□□□□□ -1.89
LINC00458-202ENST00000427299 FASNP49327 2511 aaKnown RBP3.24□□□□□ -1.89
LINC00458-202ENST00000427299 MAP1AP78559 2803 aaPredicted RBP3.24□□□□□ -1.89
LINC00458-202ENST00000427299 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 FAM236DA0A1B0GTK5 79 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 H3BNG1 76 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 NDUFC1O43677 76 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 CHTF8P0CG12 524 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 FAM236CP0DP71 79 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 EPG5Q9HCE0 2579 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 C2CD3Q4AC94 2353 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 APCP25054 2843 aa3.24□□□□□ -1.89
LINC00458-202ENST00000427299 NBPF19A0A087WUL8 3843 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 IGLV10-54A0A075B6I4 117 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 A0A087WVE0 104 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 A0A096LPF7 62 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 LOC107984640A0A0U1RRK4 108 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
LINC00458-202ENST00000427299 ZNF73O43830 326 aaPredicted RBP3.23□□□□□ -1.89
LINC00458-202ENST00000427299 COX7BP24311 80 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 ELOF1P60002 83 aaKnown RBP3.23□□□□□ -1.89
LINC00458-202ENST00000427299 C5orf47Q569G3 176 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 C9orf129Q5T035 196 aaKnown RBP3.23□□□□□ -1.89
LINC00458-202ENST00000427299 ENHOQ6UWT2 76 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 Q6ZQY7 126 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 Q8NAQ8 132 aa3.23□□□□□ -1.89
LINC00458-202ENST00000427299 A0A1B0GW54 56 aa3.22□□□□□ -1.89
LINC00458-202ENST00000427299 M0R378 163 aa3.22□□□□□ -1.89
LINC00458-202ENST00000427299 CAMK2N2Q96S95 79 aa3.22□□□□□ -1.89
LINC00458-202ENST00000427299 TRBV7-4A0A0J9YYF1 115 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 J3QKU1 62 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 ERC2-IT1O76042 136 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 KLKP1Q107X0 134 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 MRPL55Q7Z7F7 128 aaKnown RBP3.21□□□□□ -1.9
LINC00458-202ENST00000427299 C3orf56Q8N813 242 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 KLK12Q9UKR0 248 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 HIVEP2P31629 2446 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 CENPEQ02224 2701 aa3.21□□□□□ -1.9
LINC00458-202ENST00000427299 CCDC168Q8NDH2 2452 aa3.2□□□□□ -1.9
LINC00458-202ENST00000427299 PRB2P02812 416 aaPredicted RBP3.2□□□□□ -1.9
LINC00458-202ENST00000427299 HTN3P15516 51 aa3.2□□□□□ -1.9
LINC00458-202ENST00000427299 C9orf116Q5BN46 136 aaPredicted RBP3.2□□□□□ -1.9
LINC00458-202ENST00000427299 UNQ6190/PRO20217Q6UXQ8 127 aa3.2□□□□□ -1.9
LINC00458-202ENST00000427299 FAM19A5Q7Z5A7 132 aaPredicted RBP3.2□□□□□ -1.9
LINC00458-202ENST00000427299 C20orf197Q8N268 126 aa3.2□□□□□ -1.9
LINC00458-202ENST00000427299 C6orf48Q9UBA6 75 aa3.2□□□□□ -1.9
LINC00458-202ENST00000427299 SERP1Q9Y6X1 66 aa3.2□□□□□ -1.9
LINC00458-202ENST00000427299 FUSP35637 526 aaKnown RBP eCLIP3.19□□□□□ -1.9
LINC00458-202ENST00000427299 PRR3P79522 188 aaKnown RBP3.19□□□□□ -1.9
LINC00458-202ENST00000427299 HAMPP81172 84 aa3.19□□□□□ -1.9
LINC00458-202ENST00000427299 LINC01556Q5JQF7 62 aa3.19□□□□□ -1.9
LINC00458-202ENST00000427299 FAM19A1Q7Z5A9 133 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms