RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 NREPQ16612 68 aa8.92□□□□□ -0.98
USP42-203ENST00000426246 BPY2O14599 106 aa8.92□□□□□ -0.98
USP42-203ENST00000426246 LRCOL1A6NCL2 159 aa8.91□□□□□ -0.98
USP42-203ENST00000426246 MUC7Q8TAX7 377 aa8.91□□□□□ -0.98
USP42-203ENST00000426246 C2orf48Q96LS8 159 aa8.91□□□□□ -0.98
USP42-203ENST00000426246 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
USP42-203ENST00000426246 Q6ZRP5 223 aa8.9□□□□□ -0.98
USP42-203ENST00000426246 NDUFC2O95298 119 aa8.9□□□□□ -0.99
USP42-203ENST00000426246 Q6ZQT0 140 aa8.9□□□□□ -0.99
USP42-203ENST00000426246 LINC01600Q96MT4 127 aa8.89□□□□□ -0.99
USP42-203ENST00000426246 CASC10Q5T4H9 136 aa8.89□□□□□ -0.99
USP42-203ENST00000426246 COL7A1Q02388 2944 aa8.88□□□□□ -0.99
USP42-203ENST00000426246 ETDCA0A1B0GVM5 59 aa8.88□□□□□ -0.99
USP42-203ENST00000426246 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
USP42-203ENST00000426246 TM2D3Q9BRN9 247 aa8.88□□□□□ -0.99
USP42-203ENST00000426246 HIGD2AQ9BW72 106 aa8.88□□□□□ -0.99
USP42-203ENST00000426246 PSCAO43653 123 aa8.87□□□□□ -0.99
USP42-203ENST00000426246 F8WEM9 126 aa8.87□□□□□ -0.99
USP42-203ENST00000426246 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
USP42-203ENST00000426246 MPLKIPQ8TAP9 179 aa8.86□□□□□ -0.99
USP42-203ENST00000426246 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
USP42-203ENST00000426246 DNHD1Q96M86 4753 aa8.85□□□□□ -0.99
USP42-203ENST00000426246 DNAH9Q9NYC9 4486 aa8.85□□□□□ -0.99
USP42-203ENST00000426246 FAM30AQ9NZY2 134 aa8.85□□□□□ -0.99
USP42-203ENST00000426246 CRYGAP11844 174 aa8.84□□□□□ -0.99
USP42-203ENST00000426246 MDFIQ99750 246 aa8.84□□□□□ -0.99
USP42-203ENST00000426246 A0A0U1RQV1 116 aa8.84□□□□□ -0.99
USP42-203ENST00000426246 NDUFC2-KCTD14E9PQ53 114 aa8.84□□□□□ -0.99
USP42-203ENST00000426246 M0R378 163 aa8.84□□□□□ -0.99
USP42-203ENST00000426246 IGLV6-57P01721 117 aa8.83□□□□□ -1
USP42-203ENST00000426246 PKIGQ9Y2B9 76 aa8.83□□□□□ -1
USP42-203ENST00000426246 FAM236DA0A1B0GTK5 79 aa8.82□□□□□ -1
USP42-203ENST00000426246 FAM236CP0DP71 79 aa8.82□□□□□ -1
USP42-203ENST00000426246 VPREB1P12018 145 aa8.82□□□□□ -1
USP42-203ENST00000426246 C15orf56Q8N910 161 aa8.81□□□□□ -1
USP42-203ENST00000426246 C7orf33Q8WU49 177 aa8.81□□□□□ -1
USP42-203ENST00000426246 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
USP42-203ENST00000426246 UBE2DNLQ8IWF7 75 aa8.81□□□□□ -1
USP42-203ENST00000426246 LYSTQ99698 3801 aa8.81□□□□□ -1
USP42-203ENST00000426246 TMEM258P61165 79 aa8.8□□□□□ -1
USP42-203ENST00000426246 PRLHP81277 87 aa8.8□□□□□ -1
USP42-203ENST00000426246 PRR34Q9NV39 138 aa8.8□□□□□ -1
USP42-203ENST00000426246 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
USP42-203ENST00000426246 K7EIL1 84 aa8.78□□□□□ -1
USP42-203ENST00000426246 OXTP01178 125 aa8.78□□□□□ -1
USP42-203ENST00000426246 WFDC13Q8IUB5 93 aa8.78□□□□□ -1
USP42-203ENST00000426246 ELOF1P60002 83 aaKnown RBP8.77□□□□□ -1.01
USP42-203ENST00000426246 DNAH1Q9P2D7 4330 aa8.77□□□□□ -1.01
USP42-203ENST00000426246 ATP5EP2Q5VTU8 51 aa8.76□□□□□ -1.01
USP42-203ENST00000426246 DYNC2H1Q8NCM8 4307 aaKnown RBP8.76□□□□□ -1.01
USP42-203ENST00000426246 PRKDCP78527 4128 aaKnown RBP8.75□□□□□ -1.01
USP42-203ENST00000426246 LINC00167Q96N53 147 aa8.74□□□□□ -1.01
USP42-203ENST00000426246 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
USP42-203ENST00000426246 TRAV7A0A075B6U4 112 aa8.73□□□□□ -1.01
USP42-203ENST00000426246 ERC2-IT1O76042 136 aa8.73□□□□□ -1.01
USP42-203ENST00000426246 LINC00474Q9P2X8 69 aa8.73□□□□□ -1.01
USP42-203ENST00000426246 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
USP42-203ENST00000426246 BRK1Q8WUW1 75 aa8.73□□□□□ -1.01
USP42-203ENST00000426246 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
USP42-203ENST00000426246 DNAH7Q8WXX0 4024 aa8.71□□□□□ -1.01
USP42-203ENST00000426246 SMIM29Q86T20 159 aa8.71□□□□□ -1.01
USP42-203ENST00000426246 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.01
USP42-203ENST00000426246 LINC00588Q9Y4M8 146 aa8.71□□□□□ -1.01
USP42-203ENST00000426246 H3BNG1 76 aa8.71□□□□□ -1.02
USP42-203ENST00000426246 PDE6GP18545 87 aa8.71□□□□□ -1.02
USP42-203ENST00000426246 Q8N377 158 aa8.7□□□□□ -1.02
USP42-203ENST00000426246 TMEM254Q8TBM7 123 aa8.69□□□□□ -1.02
USP42-203ENST00000426246 MEGF8Q7Z7M0 2845 aa8.69□□□□□ -1.02
USP42-203ENST00000426246 LOC110117498A0A087WWA1 95 aa8.69□□□□□ -1.02
USP42-203ENST00000426246 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
USP42-203ENST00000426246 H7BZZ5 65 aa8.67□□□□□ -1.02
USP42-203ENST00000426246 TRBV7-4A0A0J9YYF1 115 aa8.67□□□□□ -1.02
USP42-203ENST00000426246 A0A087WSZ3 146 aa8.67□□□□□ -1.02
USP42-203ENST00000426246 MRPL55Q7Z7F7 128 aaKnown RBP8.66□□□□□ -1.02
USP42-203ENST00000426246 TGP01266 2768 aa8.65□□□□□ -1.02
USP42-203ENST00000426246 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
USP42-203ENST00000426246 Q9BRP9 147 aa8.64□□□□□ -1.03
USP42-203ENST00000426246 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
USP42-203ENST00000426246 PLECQ15149 4684 aaKnown RBP8.64□□□□□ -1.03
USP42-203ENST00000426246 CXCL6P80162 114 aa8.62□□□□□ -1.03
USP42-203ENST00000426246 K7EQZ3 153 aa8.62□□□□□ -1.03
USP42-203ENST00000426246 A0A1W2PNM2 257 aa8.62□□□□□ -1.03
USP42-203ENST00000426246 UBE2AP49459 152 aa8.62□□□□□ -1.03
USP42-203ENST00000426246 Q6ZRX8 168 aa8.62□□□□□ -1.03
USP42-203ENST00000426246 TRBV7-6A0A0J9YX20 115 aa8.61□□□□□ -1.03
USP42-203ENST00000426246 H0Y9J4 135 aa8.61□□□□□ -1.03
USP42-203ENST00000426246 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
USP42-203ENST00000426246 STARD9Q9P2P6 4700 aa8.61□□□□□ -1.03
USP42-203ENST00000426246 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
USP42-203ENST00000426246 IGKV4-1P06312 121 aa8.6□□□□□ -1.03
USP42-203ENST00000426246 IGLV9-49A0A0B4J1Y8 123 aa8.6□□□□□ -1.03
USP42-203ENST00000426246 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
USP42-203ENST00000426246 DNAH10Q8IVF4 4471 aa8.59□□□□□ -1.03
USP42-203ENST00000426246 DHRS4-AS1Q9P1J3 65 aa8.58□□□□□ -1.04
USP42-203ENST00000426246 PRYO14603 147 aa8.58□□□□□ -1.04
USP42-203ENST00000426246 LINC00476Q8WZB0 136 aa8.58□□□□□ -1.04
USP42-203ENST00000426246 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
USP42-203ENST00000426246 PSPHP1O15172 72 aa8.56□□□□□ -1.04
USP42-203ENST00000426246 NDUFS5O43920 106 aa8.56□□□□□ -1.04
USP42-203ENST00000426246 KCNQ1DNQ9H478 68 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms