RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
UBR4-207ENST00000425413 HAMPP81172 84 aa7.51□□□□□ -1.21
UBR4-207ENST00000425413 KRTAP1-5Q9BYS1 174 aa7.51□□□□□ -1.21
UBR4-207ENST00000425413 Q6ZQT0 140 aa7.51□□□□□ -1.21
UBR4-207ENST00000425413 DNAH10Q8IVF4 4471 aa7.51□□□□□ -1.21
UBR4-207ENST00000425413 UBE2DNLQ8IWF7 75 aa7.5□□□□□ -1.21
UBR4-207ENST00000425413 CYSTM1Q9H1C7 97 aa7.5□□□□□ -1.21
UBR4-207ENST00000425413 LINC00528Q8N1L1 170 aa7.5□□□□□ -1.21
UBR4-207ENST00000425413 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.49□□□□□ -1.21
UBR4-207ENST00000425413 IGKV2-24A0A0C4DH68 120 aa7.49□□□□□ -1.21
UBR4-207ENST00000425413 SERP2Q8N6R1 65 aa7.49□□□□□ -1.21
UBR4-207ENST00000425413 UPK3BQ9BT76 320 aa7.49□□□□□ -1.21
UBR4-207ENST00000425413 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.48□□□□□ -1.21
UBR4-207ENST00000425413 GHRHP01286 108 aa7.48□□□□□ -1.21
UBR4-207ENST00000425413 PSCAO43653 123 aa7.48□□□□□ -1.21
UBR4-207ENST00000425413 RMI2Q96E14 147 aa7.48□□□□□ -1.21
UBR4-207ENST00000425413 SCXQ7RTU7 201 aa7.47□□□□□ -1.21
UBR4-207ENST00000425413 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
UBR4-207ENST00000425413 CRYGAP11844 174 aa7.46□□□□□ -1.22
UBR4-207ENST00000425413 ATP5EP2Q5VTU8 51 aa7.45□□□□□ -1.22
UBR4-207ENST00000425413 Q6ZVQ6 151 aa7.45□□□□□ -1.22
UBR4-207ENST00000425413 KCNQ1DNQ9H478 68 aa7.45□□□□□ -1.22
UBR4-207ENST00000425413 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
UBR4-207ENST00000425413 LOC110117498A0A087WWA1 95 aa7.45□□□□□ -1.22
UBR4-207ENST00000425413 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
UBR4-207ENST00000425413 TRBV7-6A0A0J9YX20 115 aa7.44□□□□□ -1.22
UBR4-207ENST00000425413 F8WDY8 70 aa7.44□□□□□ -1.22
UBR4-207ENST00000425413 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
UBR4-207ENST00000425413 ETDCA0A1B0GVM5 59 aa7.44□□□□□ -1.22
UBR4-207ENST00000425413 LINC01547P58512 204 aaPredicted RBP7.44□□□□□ -1.22
UBR4-207ENST00000425413 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
UBR4-207ENST00000425413 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
UBR4-207ENST00000425413 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
UBR4-207ENST00000425413 Q9BRP9 147 aa7.42□□□□□ -1.22
UBR4-207ENST00000425413 MRPL55Q7Z7F7 128 aaKnown RBP7.42□□□□□ -1.22
UBR4-207ENST00000425413 A0A096LNI7 61 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 UBE2BP63146 152 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 APLNQ9ULZ1 77 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
UBR4-207ENST00000425413 ERC2-IT1O76042 136 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 Q6ZRX8 168 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 C20orf197Q8N268 126 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 Q8N377 158 aa7.41□□□□□ -1.22
UBR4-207ENST00000425413 C3orf84H3BNL1 204 aa7.4□□□□□ -1.22
UBR4-207ENST00000425413 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
UBR4-207ENST00000425413 PDE6GP18545 87 aa7.4□□□□□ -1.23
UBR4-207ENST00000425413 DNAH7Q8WXX0 4024 aa7.4□□□□□ -1.23
UBR4-207ENST00000425413 A0A1W2PNN7 141 aa7.38□□□□□ -1.23
UBR4-207ENST00000425413 H3BQ85 93 aa7.38□□□□□ -1.23
UBR4-207ENST00000425413 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
UBR4-207ENST00000425413 PLA2G2DQ9UNK4 145 aa7.38□□□□□ -1.23
UBR4-207ENST00000425413 PRLHP81277 87 aa7.37□□□□□ -1.23
UBR4-207ENST00000425413 Q8N9L7 120 aa7.37□□□□□ -1.23
UBR4-207ENST00000425413 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
UBR4-207ENST00000425413 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
UBR4-207ENST00000425413 PRYO14603 147 aa7.37□□□□□ -1.23
UBR4-207ENST00000425413 J3KT08 172 aa7.36□□□□□ -1.23
UBR4-207ENST00000425413 FUSP35637 526 aaKnown RBP eCLIP7.36□□□□□ -1.232e-7■■□□□ 12.3
UBR4-207ENST00000425413 A0A0G2JQZ4 141 aa7.36□□□□□ -1.23
UBR4-207ENST00000425413 DHRS4-AS1Q9P1J3 65 aa7.36□□□□□ -1.23
UBR4-207ENST00000425413 REG3GQ6UW15 175 aa7.35□□□□□ -1.23
UBR4-207ENST00000425413 IGLV5-37A0A075B6J1 123 aa7.35□□□□□ -1.23
UBR4-207ENST00000425413 TMEM258P61165 79 aa7.35□□□□□ -1.23
UBR4-207ENST00000425413 MEGF8Q7Z7M0 2845 aa7.35□□□□□ -1.23
UBR4-207ENST00000425413 HIGD2AQ9BW72 106 aa7.34□□□□□ -1.23
UBR4-207ENST00000425413 SPRR1AP35321 89 aa7.34□□□□□ -1.23
UBR4-207ENST00000425413 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
UBR4-207ENST00000425413 SNURFQ9Y675 71 aa7.34□□□□□ -1.23
UBR4-207ENST00000425413 PHF5AQ7RTV0 110 aaKnown RBP7.33□□□□□ -1.24
UBR4-207ENST00000425413 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
UBR4-207ENST00000425413 CXCL6P80162 114 aa7.33□□□□□ -1.24
UBR4-207ENST00000425413 SVIPQ8NHG7 77 aa7.33□□□□□ -1.24
UBR4-207ENST00000425413 NREPQ16612 68 aa7.32□□□□□ -1.24
UBR4-207ENST00000425413 PRKDCP78527 4128 aaKnown RBP7.32□□□□□ -1.24
UBR4-207ENST00000425413 TRAV7A0A075B6U4 112 aa7.32□□□□□ -1.24
UBR4-207ENST00000425413 KRTAP11-1Q8IUC1 163 aa7.32□□□□□ -1.24
UBR4-207ENST00000425413 NBDYA0A0U1RRE5 68 aa7.31□□□□□ -1.24
UBR4-207ENST00000425413 CNBPP62633 177 aaKnown RBP7.31□□□□□ -1.24
UBR4-207ENST00000425413 C1orf137Q5JT78 98 aa7.31□□□□□ -1.24
UBR4-207ENST00000425413 TGP01266 2768 aa7.31□□□□□ -1.24
UBR4-207ENST00000425413 DNHD1Q96M86 4753 aa7.3□□□□□ -1.24
UBR4-207ENST00000425413 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
UBR4-207ENST00000425413 BPY2O14599 106 aa7.29□□□□□ -1.24
UBR4-207ENST00000425413 PANO1I0J062 215 aa7.29□□□□□ -1.24
UBR4-207ENST00000425413 IGLV5-48A0A075B6I7 105 aa7.29□□□□□ -1.24
UBR4-207ENST00000425413 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
UBR4-207ENST00000425413 NUPR2A6NF83 97 aa7.28□□□□□ -1.24
UBR4-207ENST00000425413 OXTP01178 125 aa7.27□□□□□ -1.25
UBR4-207ENST00000425413 LRCOL1A6NCL2 159 aa7.27□□□□□ -1.25
UBR4-207ENST00000425413 C14orf177Q52M58 125 aa7.26□□□□□ -1.25
UBR4-207ENST00000425413 RPS28P62857 69 aaKnown RBP7.26□□□□□ -1.25
UBR4-207ENST00000425413 FAM236DA0A1B0GTK5 79 aa7.25□□□□□ -1.25
UBR4-207ENST00000425413 FAM236CP0DP71 79 aa7.25□□□□□ -1.25
UBR4-207ENST00000425413 F8WEM9 126 aa7.25□□□□□ -1.25
UBR4-207ENST00000425413 TNP2Q05952 138 aa7.25□□□□□ -1.25
UBR4-207ENST00000425413 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
UBR4-207ENST00000425413 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
UBR4-207ENST00000425413 SMIM29Q86T20 159 aa7.24□□□□□ -1.25
UBR4-207ENST00000425413 EPM2AB3EWF7 344 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms