RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 P0C880 135 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 DEFB133Q30KQ1 61 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 C1orf134Q5TEV5 83 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 CSAG1Q6PB30 78 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 LYPD2Q6UXB3 125 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 Q8NDZ9 215 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 WFDC10AQ9H1F0 79 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 KAAG1Q9UBP8 84 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 FAM215AQ9Y5M1 114 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 USP9XQ93008 2570 aaPredicted RBP1.61□□□□□ -2.15
LINC01040-201ENST00000425048 KNL1Q8NG31 2342 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 SDK1Q7Z5N4 2213 aa1.6□□□□□ -2.15
LINC01040-201ENST00000425048 ANKRD17O75179 2603 aaKnown RBP1.6□□□□□ -2.15
LINC01040-201ENST00000425048 ROMO1P60602 79 aa1.6□□□□□ -2.15
LINC01040-201ENST00000425048 Q6ZQY7 126 aa1.6□□□□□ -2.15
LINC01040-201ENST00000425048 GOLGB1Q14789 3259 aaKnown RBP1.6□□□□□ -2.15
LINC01040-201ENST00000425048 IGKV2-24A0A0C4DH68 120 aa1.59□□□□□ -2.15
LINC01040-201ENST00000425048 H3BPC8 53 aa1.59□□□□□ -2.15
LINC01040-201ENST00000425048 IGLV6-57P01721 117 aa1.59□□□□□ -2.15
LINC01040-201ENST00000425048 REG3AQ06141 175 aa1.59□□□□□ -2.15
LINC01040-201ENST00000425048 SPAG11BQ08648 103 aa1.59□□□□□ -2.15
LINC01040-201ENST00000425048 WNK2Q9Y3S1 2297 aa1.59□□□□□ -2.16
LINC01040-201ENST00000425048 AHCTF1Q8WYP5 2266 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 A0A1B0GW54 56 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 A8MTW9 85 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 H0Y9P7 68 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 MINOS1Q5TGZ0 78 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 TOMM7Q9P0U1 55 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 U3KQA8 63 aa1.58□□□□□ -2.16
LINC01040-201ENST00000425048 SPTBN1Q01082 2364 aaKnown RBP1.58□□□□□ -2.16
LINC01040-201ENST00000425048 SZT2Q5T011 3432 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 TRGV4A0A0C4DH28 118 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 K7EQZ3 153 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 IGHV3-11P01762 117 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 SPAG11AQ6PDA7 123 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 Q8IZM0 81 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 SPRR4Q96PI1 79 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 PRO3102Q9H379 93 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 TEP1Q99973 2627 aaKnown RBP1.57□□□□□ -2.16
LINC01040-201ENST00000425048 WDR87Q6ZQQ6 2873 aa1.57□□□□□ -2.16
LINC01040-201ENST00000425048 NAV2Q8IVL1 2488 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 IGLV5-48A0A075B6I7 105 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 A8MUU9 505 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 G3V318 75 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 HRES1P13985 223 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 COX17Q14061 63 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 SPINK13Q1W4C9 94 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 DEFB112Q30KQ8 113 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 ANKRD11Q6UB99 2663 aaPredicted RBP1.56□□□□□ -2.16
LINC01040-201ENST00000425048 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
LINC01040-201ENST00000425048 SPTBN2O15020 2390 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 MGAQ8IWI9 3026 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 PTPN13Q12923 2485 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 MIR22HGQ0VDD5 57 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 C15orf56Q8N910 161 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 RHPN1-AS1Q9BWJ2 59 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 UTRNP46939 3433 aa1.55□□□□□ -2.16
LINC01040-201ENST00000425048 ASH1LQ9NR48 2969 aaKnown RBP1.55□□□□□ -2.16
LINC01040-201ENST00000425048 MYO18BQ8IUG5 2567 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 PIEZO1Q92508 2521 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 IGKV3-7A0A075B6H7 116 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 WFDC13Q8IUB5 93 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 CNEP1R1Q8N9A8 125 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 XAGE1AQ9HD64 81 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 UNC80Q8N2C7 3258 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 PKDREJQ9NTG1 2253 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 CACNA1EQ15878 2313 aa1.54□□□□□ -2.16
LINC01040-201ENST00000425048 EYSQ5T1H1 3165 aa1.53□□□□□ -2.16
LINC01040-201ENST00000425048 USP34Q70CQ2 3546 aa1.53□□□□□ -2.16
LINC01040-201ENST00000425048 DEFB131BA0A096LNP1 70 aa1.53□□□□□ -2.16
LINC01040-201ENST00000425048 FLNBO75369 2602 aaKnown RBP1.53□□□□□ -2.16
LINC01040-201ENST00000425048 CFAP47Q6ZTR5 3102 aa1.53□□□□□ -2.16
LINC01040-201ENST00000425048 PCNX1Q96RV3 2341 aa1.53□□□□□ -2.16
LINC01040-201ENST00000425048 MINOS1-NBL1R4GNA1 71 aa1.53□□□□□ -2.16
LINC01040-201ENST00000425048 SPTBN5Q9NRC6 3674 aaKnown RBP1.53□□□□□ -2.17
LINC01040-201ENST00000425048 EPG5Q9HCE0 2579 aa1.53□□□□□ -2.17
LINC01040-201ENST00000425048 DNAH12Q6ZR08 3092 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 A0A087WSZ3 146 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 IGKV3OR2-268A0A0C4DH90 116 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 J3QKU1 62 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 CMC4P56277 68 aaPredicted RBP1.52□□□□□ -2.17
LINC01040-201ENST00000425048 C5orf56Q8N8D9 126 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 C20orf166-AS1Q96NR2 134 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 FAM186AA6NE01 2351 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 BDP1A6H8Y1 2624 aa1.52□□□□□ -2.17
LINC01040-201ENST00000425048 SETD2Q9BYW2 2564 aaPredicted RBP1.52□□□□□ -2.17
LINC01040-201ENST00000425048 MKI67P46013 3256 aaKnown RBP1.51□□□□□ -2.17
LINC01040-201ENST00000425048 COL6A6A6NMZ7 2263 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 DNAH14Q0VDD8 3507 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 GVQW2A0A096LPI5 108 aaPredicted RBP1.51□□□□□ -2.17
LINC01040-201ENST00000425048 LYNX1G3V0Z9 82 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 H3BUA1 57 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 LYNX1P0DP58 116 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 DEFB113Q30KQ7 82 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 C1orf137Q5JT78 98 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 KRTAP26-1Q6PEX3 210 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 USMG5Q96IX5 58 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms