RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 MT1HL1P0DM35 61 aa8.92□□□□□ -0.98
TMEM248-204ENST00000424964 SPRR1AP35321 89 aa8.92□□□□□ -0.98
TMEM248-204ENST00000424964 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
TMEM248-204ENST00000424964 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
TMEM248-204ENST00000424964 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
TMEM248-204ENST00000424964 DLEU1O43261 78 aa8.91□□□□□ -0.98
TMEM248-204ENST00000424964 HIGD2AQ9BW72 106 aa8.91□□□□□ -0.98
TMEM248-204ENST00000424964 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
TMEM248-204ENST00000424964 KRTAP4-16G5E9R7 235 aaPredicted RBP8.89□□□□□ -0.99
TMEM248-204ENST00000424964 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
TMEM248-204ENST00000424964 SLC25A34Q6PIV7 304 aa8.89□□□□□ -0.99
TMEM248-204ENST00000424964 HIST1H4GQ99525 98 aa8.89□□□□□ -0.99
TMEM248-204ENST00000424964 A6NDN8 102 aa8.88□□□□□ -0.99
TMEM248-204ENST00000424964 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
TMEM248-204ENST00000424964 PRR26Q8N8Z3 221 aa8.88□□□□□ -0.99
TMEM248-204ENST00000424964 B5MCH6 92 aa8.87□□□□□ -0.99
TMEM248-204ENST00000424964 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
TMEM248-204ENST00000424964 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
TMEM248-204ENST00000424964 A4D1N5 150 aa8.85□□□□□ -0.99
TMEM248-204ENST00000424964 SMCR5Q8TEV8 140 aa8.85□□□□□ -0.99
TMEM248-204ENST00000424964 TRAV13-2A0A0B4J235 113 aa8.84□□□□□ -0.99
TMEM248-204ENST00000424964 Q6ZRX8 168 aa8.84□□□□□ -0.99
TMEM248-204ENST00000424964 ANAPC11Q9NYG5 84 aa8.84□□□□□ -0.99
TMEM248-204ENST00000424964 HIGD1BQ9P298 99 aa8.84□□□□□ -0.99
TMEM248-204ENST00000424964 CRYGAP11844 174 aa8.82□□□□□ -1
TMEM248-204ENST00000424964 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
TMEM248-204ENST00000424964 C6orf99Q4VX62 202 aa8.82□□□□□ -1
TMEM248-204ENST00000424964 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
TMEM248-204ENST00000424964 C2orf91Q6ZV80 131 aa8.81□□□□□ -1
TMEM248-204ENST00000424964 Q9BRP9 147 aa8.81□□□□□ -1
TMEM248-204ENST00000424964 A0A087X002 238 aa8.8□□□□□ -1
TMEM248-204ENST00000424964 ERC2-IT1O76042 136 aa8.8□□□□□ -1
TMEM248-204ENST00000424964 SPRR4Q96PI1 79 aa8.8□□□□□ -1
TMEM248-204ENST00000424964 C12orf57Q99622 126 aa8.8□□□□□ -1
TMEM248-204ENST00000424964 COX7BP24311 80 aa8.79□□□□□ -1
TMEM248-204ENST00000424964 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
TMEM248-204ENST00000424964 TNXBP22105 4242 aa8.79□□□□□ -1
TMEM248-204ENST00000424964 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
TMEM248-204ENST00000424964 SMIM11BQ8TCY0 68 aa8.78□□□□□ -1
TMEM248-204ENST00000424964 TAL2Q16559 108 aa8.77□□□□□ -1.01
TMEM248-204ENST00000424964 ELOF1P60002 83 aaKnown RBP8.76□□□□□ -1.01
TMEM248-204ENST00000424964 GAGE2AQ6NT46 116 aa8.76□□□□□ -1.01
TMEM248-204ENST00000424964 CEND1Q8N111 149 aa8.76□□□□□ -1.01
TMEM248-204ENST00000424964 DHRS4-AS1Q9P1J3 65 aa8.76□□□□□ -1.01
TMEM248-204ENST00000424964 UQCR10Q9UDW1 63 aa8.76□□□□□ -1.01
TMEM248-204ENST00000424964 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
TMEM248-204ENST00000424964 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
TMEM248-204ENST00000424964 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
TMEM248-204ENST00000424964 RAB37Q96AX2 223 aa8.74□□□□□ -1.01
TMEM248-204ENST00000424964 CFC1BP0CG36 223 aa8.73□□□□□ -1.01
TMEM248-204ENST00000424964 CFC1P0CG37 223 aa8.73□□□□□ -1.01
TMEM248-204ENST00000424964 VAMP3Q15836 100 aa8.73□□□□□ -1.01
TMEM248-204ENST00000424964 TMEM238LA0A1B0GVL6 79 aa8.72□□□□□ -1.01
TMEM248-204ENST00000424964 A6NJY4 79 aa8.72□□□□□ -1.01
TMEM248-204ENST00000424964 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
TMEM248-204ENST00000424964 ST20-AS1Q8NBB2 130 aa8.72□□□□□ -1.01
TMEM248-204ENST00000424964 HERC1Q15751 4861 aa8.72□□□□□ -1.01
TMEM248-204ENST00000424964 H7C2G1 150 aa8.71□□□□□ -1.02
TMEM248-204ENST00000424964 SMIM6P0DI80 62 aa8.71□□□□□ -1.02
TMEM248-204ENST00000424964 HSD52Q0P140 79 aa8.71□□□□□ -1.02
TMEM248-204ENST00000424964 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
TMEM248-204ENST00000424964 A0A0B4J2C4 111 aa8.7□□□□□ -1.02
TMEM248-204ENST00000424964 FXYD2P54710 66 aa8.7□□□□□ -1.02
TMEM248-204ENST00000424964 PRO1933Q9H354 126 aa8.7□□□□□ -1.02
TMEM248-204ENST00000424964 LOC105371267A0A1B0GV96 52 aa8.69□□□□□ -1.02
TMEM248-204ENST00000424964 SLC25A20O43772 301 aa8.68□□□□□ -1.02
TMEM248-204ENST00000424964 DEFB105AQ8NG35 78 aa8.68□□□□□ -1.02
TMEM248-204ENST00000424964 NHP2Q9NX24 153 aaKnown RBP8.68□□□□□ -1.02
TMEM248-204ENST00000424964 IGLV9-49A0A0B4J1Y8 123 aa8.67□□□□□ -1.02
TMEM248-204ENST00000424964 TSPAN13O95857 204 aa8.67□□□□□ -1.02
TMEM248-204ENST00000424964 Q1RN00 199 aa8.66□□□□□ -1.02
TMEM248-204ENST00000424964 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
TMEM248-204ENST00000424964 PRO1854Q9UHT4 67 aa8.66□□□□□ -1.02
TMEM248-204ENST00000424964 BVES-AS1Q5T3Y7 98 aa8.65□□□□□ -1.02
TMEM248-204ENST00000424964 MOBPQ13875 183 aa8.64□□□□□ -1.03
TMEM248-204ENST00000424964 LINC00575Q6W349 94 aa8.64□□□□□ -1.03
TMEM248-204ENST00000424964 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
TMEM248-204ENST00000424964 SPRR1BP22528 89 aa8.63□□□□□ -1.03
TMEM248-204ENST00000424964 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
TMEM248-204ENST00000424964 hADV29S1A0JD25 119 aa8.62□□□□□ -1.03
TMEM248-204ENST00000424964 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
TMEM248-204ENST00000424964 Q8NBF4 154 aa8.62□□□□□ -1.03
TMEM248-204ENST00000424964 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
TMEM248-204ENST00000424964 SSBP3-AS1Q7Z2R9 100 aa8.61□□□□□ -1.03
TMEM248-204ENST00000424964 K7ERJ3 54 aa8.6□□□□□ -1.03
TMEM248-204ENST00000424964 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
TMEM248-204ENST00000424964 IGLV5-48A0A075B6I7 105 aa8.59□□□□□ -1.03
TMEM248-204ENST00000424964 H0YGX0 51 aa8.59□□□□□ -1.03
TMEM248-204ENST00000424964 CTAG1AP78358 180 aa8.59□□□□□ -1.03
TMEM248-204ENST00000424964 TSTD3H0UI37 97 aa8.58□□□□□ -1.04
TMEM248-204ENST00000424964 SNCGO76070 127 aa8.58□□□□□ -1.04
TMEM248-204ENST00000424964 LINC01547P58512 204 aaPredicted RBP8.58□□□□□ -1.04
TMEM248-204ENST00000424964 Q6ZQY7 126 aa8.58□□□□□ -1.04
TMEM248-204ENST00000424964 PSMB2P49721 201 aa8.57□□□□□ -1.04
TMEM248-204ENST00000424964 Q8N377 158 aa8.57□□□□□ -1.04
TMEM248-204ENST00000424964 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.56□□□□□ -1.04
TMEM248-204ENST00000424964 M0R143 59 aa8.55□□□□□ -1.04
TMEM248-204ENST00000424964 TRIAP1O43715 76 aa8.55□□□□□ -1.04
TMEM248-204ENST00000424964 PRR4Q16378 134 aa8.55□□□□□ -1.04
TMEM248-204ENST00000424964 SMIM29Q86T20 159 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms