RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SPRR4Q96PI1 79 aa13.14□□□□□ -0.31
PTCHD3P2-201ENST00000424937 SMCR5Q8TEV8 140 aa13.13□□□□□ -0.31
PTCHD3P2-201ENST00000424937 SPANXDQ9BXN6 97 aa13.13□□□□□ -0.31
PTCHD3P2-201ENST00000424937 ZNF706Q9Y5V0 76 aaPredicted RBP13.13□□□□□ -0.31
PTCHD3P2-201ENST00000424937 OR13C6PQ8NH95 151 aa13.11□□□□□ -0.31
PTCHD3P2-201ENST00000424937 Q6ZRX8 168 aa13.1□□□□□ -0.31
PTCHD3P2-201ENST00000424937 HSBP1L1C9JCN9 74 aa13.09□□□□□ -0.31
PTCHD3P2-201ENST00000424937 ZNF73O43830 326 aaPredicted RBP13.09□□□□□ -0.31
PTCHD3P2-201ENST00000424937 C5orf52A6NGY3 159 aa13.08□□□□□ -0.32
PTCHD3P2-201ENST00000424937 TSPAN13O95857 204 aa13.08□□□□□ -0.32
PTCHD3P2-201ENST00000424937 CBY1Q9Y3M2 126 aa13.08□□□□□ -0.32
PTCHD3P2-201ENST00000424937 C3orf22Q8N5N4 141 aa13.07□□□□□ -0.32
PTCHD3P2-201ENST00000424937 COPS9Q8WXC6 57 aa13.07□□□□□ -0.32
PTCHD3P2-201ENST00000424937 Q9BRP9 147 aa13.07□□□□□ -0.32
PTCHD3P2-201ENST00000424937 ERC2-IT1O76042 136 aa13.05□□□□□ -0.32
PTCHD3P2-201ENST00000424937 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
PTCHD3P2-201ENST00000424937 IFITM1P13164 125 aa13.05□□□□□ -0.32
PTCHD3P2-201ENST00000424937 LINC00518Q8N0U6 118 aa13.05□□□□□ -0.32
PTCHD3P2-201ENST00000424937 LINC00304Q8N9R0 145 aa13.05□□□□□ -0.32
PTCHD3P2-201ENST00000424937 PPDPFQ9H3Y8 114 aa13.05□□□□□ -0.32
PTCHD3P2-201ENST00000424937 LRP2P98164 4655 aa13.04□□□□□ -0.32
PTCHD3P2-201ENST00000424937 JOSD1Q15040 202 aaPredicted RBP13.04□□□□□ -0.32
PTCHD3P2-201ENST00000424937 Q6ZVH6 145 aa13.04□□□□□ -0.32
PTCHD3P2-201ENST00000424937 UBR4Q5T4S7 5183 aa13.04□□□□□ -0.32
PTCHD3P2-201ENST00000424937 HINT1P49773 126 aaPredicted RBP13.02□□□□□ -0.33
PTCHD3P2-201ENST00000424937 GAGE2AQ6NT46 116 aa13.02□□□□□ -0.33
PTCHD3P2-201ENST00000424937 MUSTN1Q8IVN3 82 aa13.01□□□□□ -0.33
PTCHD3P2-201ENST00000424937 PRR4Q16378 134 aa12.99□□□□□ -0.33
PTCHD3P2-201ENST00000424937 LINC00483Q53H64 154 aa12.99□□□□□ -0.33
PTCHD3P2-201ENST00000424937 C6orf99Q4VX62 202 aa12.95□□□□□ -0.34
PTCHD3P2-201ENST00000424937 A6NDN8 102 aa12.94□□□□□ -0.34
PTCHD3P2-201ENST00000424937 COX7BP24311 80 aa12.93□□□□□ -0.34
PTCHD3P2-201ENST00000424937 IGLV9-49A0A0B4J1Y8 123 aa12.92□□□□□ -0.34
PTCHD3P2-201ENST00000424937 ELOF1P60002 83 aaKnown RBP12.92□□□□□ -0.34
PTCHD3P2-201ENST00000424937 ST20-AS1Q8NBB2 130 aa12.92□□□□□ -0.34
PTCHD3P2-201ENST00000424937 Q8NBF4 154 aa12.92□□□□□ -0.34
PTCHD3P2-201ENST00000424937 LPAP08519 4548 aa12.92□□□□□ -0.34
PTCHD3P2-201ENST00000424937 DHRS4-AS1Q9P1J3 65 aa12.91□□□□□ -0.34
PTCHD3P2-201ENST00000424937 MOBPQ13875 183 aa12.9□□□□□ -0.34
PTCHD3P2-201ENST00000424937 TRAV13-2A0A0B4J235 113 aa12.89□□□□□ -0.35
PTCHD3P2-201ENST00000424937 COX8AP10176 69 aa12.89□□□□□ -0.35
PTCHD3P2-201ENST00000424937 RETNLBQ9BQ08 111 aa12.89□□□□□ -0.35
PTCHD3P2-201ENST00000424937 SPAG11AQ6PDA7 123 aa12.88□□□□□ -0.35
PTCHD3P2-201ENST00000424937 C4orf48Q5BLP8 95 aa12.87□□□□□ -0.35
PTCHD3P2-201ENST00000424937 CTAG1AP78358 180 aa12.86□□□□□ -0.35
PTCHD3P2-201ENST00000424937 PAM16Q9Y3D7 125 aa12.86□□□□□ -0.35
PTCHD3P2-201ENST00000424937 TRBV7-6A0A0J9YX20 115 aa12.85□□□□□ -0.35
PTCHD3P2-201ENST00000424937 A4D1N5 150 aa12.84□□□□□ -0.35
PTCHD3P2-201ENST00000424937 SPATA45Q537H7 98 aa12.84□□□□□ -0.35
PTCHD3P2-201ENST00000424937 C9orf153Q5TBE3 101 aa12.84□□□□□ -0.35
PTCHD3P2-201ENST00000424937 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
PTCHD3P2-201ENST00000424937 SMIM11BQ8TCY0 68 aa12.83□□□□□ -0.36
PTCHD3P2-201ENST00000424937 HIST1H4GQ99525 98 aa12.83□□□□□ -0.36
PTCHD3P2-201ENST00000424937 VAMP8Q9BV40 100 aa12.83□□□□□ -0.36
PTCHD3P2-201ENST00000424937 DLEU1O43261 78 aa12.82□□□□□ -0.36
PTCHD3P2-201ENST00000424937 C14orf144Q96I85 54 aa12.82□□□□□ -0.36
PTCHD3P2-201ENST00000424937 SSBP3-AS1Q7Z2R9 100 aa12.81□□□□□ -0.36
PTCHD3P2-201ENST00000424937 SPRR1BP22528 89 aa12.79□□□□□ -0.36
PTCHD3P2-201ENST00000424937 TMA7Q9Y2S6 64 aaKnown RBP12.79□□□□□ -0.36
PTCHD3P2-201ENST00000424937 C12orf57Q99622 126 aa12.78□□□□□ -0.36
PTCHD3P2-201ENST00000424937 SPINK1P00995 79 aa12.77□□□□□ -0.37
PTCHD3P2-201ENST00000424937 SLC25A34Q6PIV7 304 aa12.77□□□□□ -0.37
PTCHD3P2-201ENST00000424937 TAL2Q16559 108 aa12.76□□□□□ -0.37
PTCHD3P2-201ENST00000424937 DEFB105AQ8NG35 78 aa12.76□□□□□ -0.37
PTCHD3P2-201ENST00000424937 LAMTOR3Q9UHA4 124 aa12.74□□□□□ -0.37
PTCHD3P2-201ENST00000424937 IGLV7-46A0A075B6I9 117 aa12.72□□□□□ -0.37
PTCHD3P2-201ENST00000424937 Q1RN00 199 aa12.72□□□□□ -0.37
PTCHD3P2-201ENST00000424937 NHP2Q9NX24 153 aaKnown RBP12.72□□□□□ -0.37
PTCHD3P2-201ENST00000424937 HIGD1BQ9P298 99 aa12.72□□□□□ -0.37
PTCHD3P2-201ENST00000424937 TEX49A0A1B0GTD5 131 aa12.71□□□□□ -0.37
PTCHD3P2-201ENST00000424937 VAMP3Q15836 100 aa12.71□□□□□ -0.37
PTCHD3P2-201ENST00000424937 C2orf91Q6ZV80 131 aa12.71□□□□□ -0.37
PTCHD3P2-201ENST00000424937 PYY3Q5JQD4 70 aa12.7□□□□□ -0.38
PTCHD3P2-201ENST00000424937 RNF213Q63HN8 5207 aa12.7□□□□□ -0.38
PTCHD3P2-201ENST00000424937 SLC25A20O43772 301 aa12.68□□□□□ -0.38
PTCHD3P2-201ENST00000424937 RPS29P62273 56 aaKnown RBP12.68□□□□□ -0.38
PTCHD3P2-201ENST00000424937 IGLV5-48A0A075B6I7 105 aa12.67□□□□□ -0.38
PTCHD3P2-201ENST00000424937 LINC01547P58512 204 aaPredicted RBP12.67□□□□□ -0.38
PTCHD3P2-201ENST00000424937 TPRXLQ17RH7 258 aa12.66□□□□□ -0.38
PTCHD3P2-201ENST00000424937 FP248Q71RG6 208 aaPredicted RBP12.66□□□□□ -0.38
PTCHD3P2-201ENST00000424937 LINC00575Q6W349 94 aa12.65□□□□□ -0.38
PTCHD3P2-201ENST00000424937 Q8N377 158 aa12.65□□□□□ -0.38
PTCHD3P2-201ENST00000424937 H7C2G1 150 aa12.64□□□□□ -0.39
PTCHD3P2-201ENST00000424937 CFC1BP0CG36 223 aa12.64□□□□□ -0.39
PTCHD3P2-201ENST00000424937 CFC1P0CG37 223 aa12.64□□□□□ -0.39
PTCHD3P2-201ENST00000424937 RAB37Q96AX2 223 aa12.64□□□□□ -0.39
PTCHD3P2-201ENST00000424937 SMIM29Q86T20 159 aa12.63□□□□□ -0.39
PTCHD3P2-201ENST00000424937 HRCT1Q6UXD1 115 aa12.62□□□□□ -0.39
PTCHD3P2-201ENST00000424937 BVES-AS1Q5T3Y7 98 aa12.61□□□□□ -0.39
PTCHD3P2-201ENST00000424937 CEND1Q8N111 149 aa12.61□□□□□ -0.39
PTCHD3P2-201ENST00000424937 CDIP1Q9H305 208 aa12.61□□□□□ -0.39
PTCHD3P2-201ENST00000424937 A0A0B4J2C4 111 aa12.6□□□□□ -0.39
PTCHD3P2-201ENST00000424937 hADV29S1A0JD25 119 aa12.6□□□□□ -0.39
PTCHD3P2-201ENST00000424937 Q6ZQY7 126 aa12.59□□□□□ -0.39
PTCHD3P2-201ENST00000424937 PRO1933Q9H354 126 aa12.59□□□□□ -0.39
PTCHD3P2-201ENST00000424937 TMEM238LA0A1B0GVL6 79 aa12.56□□□□□ -0.4
PTCHD3P2-201ENST00000424937 A6NJY4 79 aa12.56□□□□□ -0.4
PTCHD3P2-201ENST00000424937 FXYD2P54710 66 aa12.55□□□□□ -0.4
PTCHD3P2-201ENST00000424937 LIMD2Q9BT23 127 aa12.55□□□□□ -0.4
PTCHD3P2-201ENST00000424937 F8WEM9 126 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms