RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 LINC01620Q4KN68 170 aa4.5□□□□□ -1.69
EPHA4-206ENST00000424339 C10orf25Q5T742 122 aa4.5□□□□□ -1.69
EPHA4-206ENST00000424339 ANKRD29Q8N6D5 301 aa4.5□□□□□ -1.69
EPHA4-206ENST00000424339 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
EPHA4-206ENST00000424339 SLC25A20O43772 301 aa4.49□□□□□ -1.69
EPHA4-206ENST00000424339 SCGB1C2P0DMR2 95 aa4.49□□□□□ -1.69
EPHA4-206ENST00000424339 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
EPHA4-206ENST00000424339 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
EPHA4-206ENST00000424339 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
EPHA4-206ENST00000424339 COPS9Q8WXC6 57 aa4.49□□□□□ -1.69
EPHA4-206ENST00000424339 RYR3Q15413 4870 aa4.49□□□□□ -1.69
EPHA4-206ENST00000424339 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 TRBV10-2A0A0K0K1G8 114 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 C9JAW5 83 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 H7C2G1 150 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 RPL13AP40429 203 aaKnown RBP4.48□□□□□ -1.69
EPHA4-206ENST00000424339 LINC00158P58513 81 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 KRTAP10-1P60331 282 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 Q6ZRP5 223 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 LINC00308Q8TCZ7 52 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 SPACA4Q8TDM5 124 aa4.48□□□□□ -1.69
EPHA4-206ENST00000424339 A0A096LNI7 61 aa4.47□□□□□ -1.69
EPHA4-206ENST00000424339 H3BT86 120 aa4.47□□□□□ -1.69
EPHA4-206ENST00000424339 LST1O00453 97 aa4.47□□□□□ -1.69
EPHA4-206ENST00000424339 PFN2P35080 140 aa4.47□□□□□ -1.69
EPHA4-206ENST00000424339 Q1RN00 199 aa4.47□□□□□ -1.69
EPHA4-206ENST00000424339 C9orf116Q5BN46 136 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-206ENST00000424339 SOSTDC1Q6X4U4 206 aa4.47□□□□□ -1.69
EPHA4-206ENST00000424339 DPH3Q96FX2 82 aa4.47□□□□□ -1.69
EPHA4-206ENST00000424339 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
EPHA4-206ENST00000424339 EPM2AB3EWF7 344 aa4.46□□□□□ -1.7
EPHA4-206ENST00000424339 FUSP35637 526 aaKnown RBP eCLIP4.46□□□□□ -1.7
EPHA4-206ENST00000424339 GAGE2EQ4V326 116 aa4.46□□□□□ -1.7
EPHA4-206ENST00000424339 SND1-IT1Q9HBX3 110 aa4.46□□□□□ -1.7
EPHA4-206ENST00000424339 PLAC8Q9NZF1 115 aa4.46□□□□□ -1.7
EPHA4-206ENST00000424339 GAGE2DQ9UEU5 116 aa4.46□□□□□ -1.7
EPHA4-206ENST00000424339 COX6CP09669 75 aa4.45□□□□□ -1.7
EPHA4-206ENST00000424339 NPC2P61916 151 aa4.45□□□□□ -1.7
EPHA4-206ENST00000424339 MIR7-3HGQ8N6C7 128 aa4.45□□□□□ -1.7
EPHA4-206ENST00000424339 DAND5Q8N907 189 aa4.45□□□□□ -1.7
EPHA4-206ENST00000424339 A0A087WYN8 130 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 NDUFC2O95298 119 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 VPREB1P12018 145 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 XGP55808 180 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
EPHA4-206ENST00000424339 SCXQ7RTU7 201 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 CLEC2BQ92478 149 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
EPHA4-206ENST00000424339 PKD1P98161 4303 aa4.43□□□□□ -1.7
EPHA4-206ENST00000424339 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
EPHA4-206ENST00000424339 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
EPHA4-206ENST00000424339 CIRBP-AS1Q8TBR5 109 aa4.43□□□□□ -1.7
EPHA4-206ENST00000424339 C7orf33Q8WU49 177 aa4.43□□□□□ -1.7
EPHA4-206ENST00000424339 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
EPHA4-206ENST00000424339 A0A0U1RRA0 63 aa4.42□□□□□ -1.7
EPHA4-206ENST00000424339 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
EPHA4-206ENST00000424339 PANO1I0J062 215 aa4.42□□□□□ -1.7
EPHA4-206ENST00000424339 TRAV13-2A0A0B4J235 113 aa4.41□□□□□ -1.7
EPHA4-206ENST00000424339 TEX49A0A1B0GTD5 131 aa4.41□□□□□ -1.7
EPHA4-206ENST00000424339 TRACP01848 142 aa4.41□□□□□ -1.7
EPHA4-206ENST00000424339 RPL28P46779 137 aaKnown RBP4.41□□□□□ -1.7
EPHA4-206ENST00000424339 FAM19A5Q7Z5A7 132 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-206ENST00000424339 MRPL55Q7Z7F7 128 aaKnown RBP4.41□□□□□ -1.7
EPHA4-206ENST00000424339 Q8N9P0 234 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-206ENST00000424339 DNAH11Q96DT5 4516 aa4.41□□□□□ -1.7
EPHA4-206ENST00000424339 IGKV2-28A0A075B6P5 120 aa4.4□□□□□ -1.71
EPHA4-206ENST00000424339 A0A1W2PNN7 141 aa4.4□□□□□ -1.71
EPHA4-206ENST00000424339 M0R378 163 aa4.4□□□□□ -1.71
EPHA4-206ENST00000424339 IGKV2D-28P01615 120 aa4.4□□□□□ -1.71
EPHA4-206ENST00000424339 Q6Q795 121 aa4.4□□□□□ -1.71
EPHA4-206ENST00000424339 LINC00337Q8N6G1 96 aa4.4□□□□□ -1.71
EPHA4-206ENST00000424339 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
EPHA4-206ENST00000424339 A0A1B0GV72 72 aa4.39□□□□□ -1.71
EPHA4-206ENST00000424339 FAM168BA1KXE4 195 aa4.39□□□□□ -1.71
EPHA4-206ENST00000424339 UBE2BP63146 152 aa4.39□□□□□ -1.71
EPHA4-206ENST00000424339 KRTAP7-1Q8IUC3 87 aa4.38□□□□□ -1.71
EPHA4-206ENST00000424339 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
EPHA4-206ENST00000424339 TMEM126AQ9H061 195 aa4.38□□□□□ -1.71
EPHA4-206ENST00000424339 S100A7L2Q5SY68 101 aa4.37□□□□□ -1.71
EPHA4-206ENST00000424339 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
EPHA4-206ENST00000424339 IGLV1-50A0A075B6I6 118 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 SNCGO76070 127 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 ACYP1P07311 99 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 RPL37AP61513 92 aaKnown RBP4.36□□□□□ -1.71
EPHA4-206ENST00000424339 PHF5AQ7RTV0 110 aaKnown RBP4.36□□□□□ -1.71
EPHA4-206ENST00000424339 SMIM11BQ8TCY0 68 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 LINC00167Q96N53 147 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 KCNQ1DNQ9H478 68 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
EPHA4-206ENST00000424339 TRBV7-7A0A0K0K1E9 115 aa4.35□□□□□ -1.71
EPHA4-206ENST00000424339 H0YGX0 51 aa4.35□□□□□ -1.71
EPHA4-206ENST00000424339 NCR3O14931 201 aa4.35□□□□□ -1.71
EPHA4-206ENST00000424339 IGLV6-57P01721 117 aa4.35□□□□□ -1.71
EPHA4-206ENST00000424339 BAALC-AS2P0C853 105 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms