RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 F8W036 122 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 M0R378 163 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 S100A8P05109 93 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 SRP19P09132 144 aaKnown RBP2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 HERVK_113P63121 156 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 SEC11AP67812 179 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 PRLHP81277 87 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 TCTE3Q8IZS6 198 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 ORMDL3Q8N138 153 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 SPRR4Q96PI1 79 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 CYSLTR1Q9Y271 337 aa2.51□□□□□ -2.01
CDC42EP3-202ENST00000422687 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 IGKV2-28A0A075B6P5 120 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 FAM240AA0A1B0GVK7 77 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 TMEM238C9JI98 176 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 SCO1O75880 301 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 SPINK1P00995 79 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 IGKV2D-28P01615 120 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 CEBPGP53567 150 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 RPS29P62273 56 aaKnown RBP2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 PDZD11Q5EBL8 140 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 TMEM136Q6ZRR5 245 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 PRELID3AQ96N28 172 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 LAMTOR2Q9Y2Q5 125 aa2.5□□□□□ -2.01
CDC42EP3-202ENST00000422687 IGHV6-1A0A0B4J1U7 121 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 A0A1B0GVG6 124 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 K7EMI3 77 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 MRPL54Q6P161 138 aaKnown RBP2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 ATP5L2Q7Z4Y8 100 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 Q8N8P6 123 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 DAND5Q8N907 189 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 Q8NDZ9 215 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 COX7B2Q8TF08 81 aa2.49□□□□□ -2.01
CDC42EP3-202ENST00000422687 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 TINCRA0A1B0GVN0 87 aa2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 C9JQL5 133 aa2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 LINC00483Q53H64 154 aa2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 ALKAL2Q6UX46 152 aa2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 FAM19A2Q8N3H0 131 aa2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 MAP1LC3AQ9H492 121 aa2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 NAT8Q9UHE5 227 aa2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 ZNF706Q9Y5V0 76 aaPredicted RBP2.48□□□□□ -2.01
CDC42EP3-202ENST00000422687 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 LOC389332A0A1B0GUA5 103 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 SPRR1AP35321 89 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 RAB5BP61020 215 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 ADIRFQ15847 76 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 SSBP3-AS1Q7Z2R9 100 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 TOMM6Q96B49 74 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 HIGD2AQ9BW72 106 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 NDUFA12Q9UI09 145 aa2.47□□□□□ -2.01
CDC42EP3-202ENST00000422687 SLC25A20O43772 301 aa2.46□□□□□ -2.02
CDC42EP3-202ENST00000422687 NDUFS5O43920 106 aa2.46□□□□□ -2.02
CDC42EP3-202ENST00000422687 G0S2P27469 103 aa2.46□□□□□ -2.02
CDC42EP3-202ENST00000422687 COX17Q14061 63 aa2.46□□□□□ -2.02
CDC42EP3-202ENST00000422687 PCOTHQ58A44 107 aa2.46□□□□□ -2.02
CDC42EP3-202ENST00000422687 NXT2Q9NPJ8 142 aaKnown RBP2.46□□□□□ -2.02
CDC42EP3-202ENST00000422687 LINC01546A6NGU7 62 aa2.45□□□□□ -2.02
CDC42EP3-202ENST00000422687 SPINK8P0C7L1 97 aa2.45□□□□□ -2.02
CDC42EP3-202ENST00000422687 ADCYAP1P18509 176 aa2.45□□□□□ -2.02
CDC42EP3-202ENST00000422687 SMCR5Q8TEV8 140 aa2.45□□□□□ -2.02
CDC42EP3-202ENST00000422687 KCNQ1DNQ9H478 68 aa2.45□□□□□ -2.02
CDC42EP3-202ENST00000422687 CST9LQ9H4G1 147 aa2.45□□□□□ -2.02
CDC42EP3-202ENST00000422687 ERG28Q9UKR5 140 aa2.45□□□□□ -2.02
CDC42EP3-202ENST00000422687 LINC01549A6NIU2 74 aa2.44□□□□□ -2.02
CDC42EP3-202ENST00000422687 RAB14P61106 215 aa2.44□□□□□ -2.02
CDC42EP3-202ENST00000422687 C5orf47Q569G3 176 aa2.44□□□□□ -2.02
CDC42EP3-202ENST00000422687 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
CDC42EP3-202ENST00000422687 SCGB3A1Q96QR1 104 aa2.44□□□□□ -2.02
CDC42EP3-202ENST00000422687 CBY1Q9Y3M2 126 aa2.44□□□□□ -2.02
CDC42EP3-202ENST00000422687 H3BRM9 83 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 ERC2-IT1O76042 136 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 IGLC3P0DOY3 106 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 PSMB2P49721 201 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 MOBPQ13875 183 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 PEA15Q15121 130 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 PMVKQ15126 192 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 ZNF625Q96I27 306 aaPredicted RBP2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 PRO0628Q9UI54 55 aa2.43□□□□□ -2.02
CDC42EP3-202ENST00000422687 M0R2T5 61 aa2.42□□□□□ -2.02
CDC42EP3-202ENST00000422687 ZNF22P17026 224 aaPredicted RBP2.42□□□□□ -2.02
CDC42EP3-202ENST00000422687 AKAP14Q86UN6 197 aa2.42□□□□□ -2.02
CDC42EP3-202ENST00000422687 ETDCA0A1B0GVM5 59 aa2.41□□□□□ -2.02
CDC42EP3-202ENST00000422687 CD164Q04900 197 aa2.41□□□□□ -2.02
CDC42EP3-202ENST00000422687 Q9BRP9 147 aa2.41□□□□□ -2.02
CDC42EP3-202ENST00000422687 TRAV9-1A0A075B6T8 112 aa2.4□□□□□ -2.03
CDC42EP3-202ENST00000422687 TRBV10-3A0A0K0K1G6 114 aa2.4□□□□□ -2.03
CDC42EP3-202ENST00000422687 MT-ND4LP03901 98 aa2.4□□□□□ -2.03
CDC42EP3-202ENST00000422687 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CDC42EP3-202ENST00000422687 LOC107984156A0A0G2JMH3 177 aa2.39□□□□□ -2.03
CDC42EP3-202ENST00000422687 C11orf86A6NJI1 115 aa2.39□□□□□ -2.03
CDC42EP3-202ENST00000422687 LINC00158P58513 81 aa2.39□□□□□ -2.03
CDC42EP3-202ENST00000422687 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
CDC42EP3-202ENST00000422687 RPL37P61927 97 aaKnown RBP2.39□□□□□ -2.03
CDC42EP3-202ENST00000422687 Q6ZRX8 168 aa2.39□□□□□ -2.03
CDC42EP3-202ENST00000422687 FA2HQ7L5A8 372 aa2.39□□□□□ -2.03
CDC42EP3-202ENST00000422687 ARL17AQ8IVW1 177 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms