RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 CEBPGP53567 150 aa4.39□□□□□ -1.71
TRIM39-206ENST00000420746 MRPL54Q6P161 138 aaKnown RBP4.39□□□□□ -1.71
TRIM39-206ENST00000420746 PRO1933Q9H354 126 aa4.39□□□□□ -1.71
TRIM39-206ENST00000420746 NXT2Q9NPJ8 142 aaKnown RBP4.39□□□□□ -1.71
TRIM39-206ENST00000420746 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
TRIM39-206ENST00000420746 SMLR1H3BR10 107 aa4.38□□□□□ -1.71
TRIM39-206ENST00000420746 PMVKQ15126 192 aa4.38□□□□□ -1.71
TRIM39-206ENST00000420746 FA2HQ7L5A8 372 aa4.38□□□□□ -1.71
TRIM39-206ENST00000420746 SCGB3A1Q96QR1 104 aa4.38□□□□□ -1.71
TRIM39-206ENST00000420746 TRBV10-2A0A0K0K1G8 114 aa4.37□□□□□ -1.71
TRIM39-206ENST00000420746 IGLC3P0DOY3 106 aa4.37□□□□□ -1.71
TRIM39-206ENST00000420746 DDTP30046 118 aa4.37□□□□□ -1.71
TRIM39-206ENST00000420746 ATP5L2Q7Z4Y8 100 aa4.37□□□□□ -1.71
TRIM39-206ENST00000420746 hCG_2014768A0A024R1R8 64 aa4.35□□□□□ -1.71
TRIM39-206ENST00000420746 A0A0G2JQZ4 141 aa4.35□□□□□ -1.71
TRIM39-206ENST00000420746 TCL1BO95988 128 aa4.35□□□□□ -1.71
TRIM39-206ENST00000420746 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
TRIM39-206ENST00000420746 ADCYAP1P18509 176 aa4.35□□□□□ -1.71
TRIM39-206ENST00000420746 MPLKIPQ8TAP9 179 aa4.35□□□□□ -1.71
TRIM39-206ENST00000420746 OBSCN-AS1Q96MR7 158 aa4.35□□□□□ -1.71
TRIM39-206ENST00000420746 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
TRIM39-206ENST00000420746 A0A0U1RRA0 63 aa4.34□□□□□ -1.71
TRIM39-206ENST00000420746 A6NN06 94 aa4.34□□□□□ -1.71
TRIM39-206ENST00000420746 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
TRIM39-206ENST00000420746 AKR1D1P51857 326 aa4.34□□□□□ -1.71
TRIM39-206ENST00000420746 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
TRIM39-206ENST00000420746 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
TRIM39-206ENST00000420746 A8MWP4 228 aa4.33□□□□□ -1.72
TRIM39-206ENST00000420746 Q6ZVH6 145 aa4.33□□□□□ -1.72
TRIM39-206ENST00000420746 Q8N9P0 234 aaPredicted RBP4.33□□□□□ -1.72
TRIM39-206ENST00000420746 LOC107984156A0A0G2JMH3 177 aa4.32□□□□□ -1.72
TRIM39-206ENST00000420746 SMIM13P0DJ93 91 aa4.32□□□□□ -1.72
TRIM39-206ENST00000420746 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
TRIM39-206ENST00000420746 PCP2Q8IVA1 136 aa4.32□□□□□ -1.72
TRIM39-206ENST00000420746 ARL17AQ8IVW1 177 aa4.32□□□□□ -1.72
TRIM39-206ENST00000420746 MIR7-3HGQ8N6C7 128 aa4.32□□□□□ -1.72
TRIM39-206ENST00000420746 TRAV23DV6A0A075B6W5 121 aa4.31□□□□□ -1.72
TRIM39-206ENST00000420746 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
TRIM39-206ENST00000420746 ZNF73O43830 326 aaPredicted RBP4.31□□□□□ -1.72
TRIM39-206ENST00000420746 ADIRFQ15847 76 aa4.31□□□□□ -1.72
TRIM39-206ENST00000420746 A8MUU9 505 aa4.3□□□□□ -1.72
TRIM39-206ENST00000420746 SRP19P09132 144 aaKnown RBP4.3□□□□□ -1.72
TRIM39-206ENST00000420746 BLOC1S1P78537 153 aa4.3□□□□□ -1.72
TRIM39-206ENST00000420746 SPANXB1Q9NS25 103 aaPredicted RBP4.3□□□□□ -1.72
TRIM39-206ENST00000420746 DHRS4-AS1Q9P1J3 65 aa4.3□□□□□ -1.72
TRIM39-206ENST00000420746 HINT1P49773 126 aaPredicted RBP4.29□□□□□ -1.72
TRIM39-206ENST00000420746 S100A7L2Q5SY68 101 aa4.29□□□□□ -1.72
TRIM39-206ENST00000420746 SLC51BQ86UW2 128 aa4.29□□□□□ -1.72
TRIM39-206ENST00000420746 NAT8Q9UHE5 227 aa4.29□□□□□ -1.72
TRIM39-206ENST00000420746 HRES1P13985 223 aa4.28□□□□□ -1.72
TRIM39-206ENST00000420746 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
TRIM39-206ENST00000420746 IGFL1Q6UW32 110 aa4.28□□□□□ -1.72
TRIM39-206ENST00000420746 Q96NJ1 140 aa4.28□□□□□ -1.72
TRIM39-206ENST00000420746 CBY1Q9Y3M2 126 aa4.28□□□□□ -1.72
TRIM39-206ENST00000420746 LINC01546A6NGU7 62 aa4.27□□□□□ -1.73
TRIM39-206ENST00000420746 HERV-K104P63124 156 aa4.27□□□□□ -1.73
TRIM39-206ENST00000420746 MAP1LC3CQ9BXW4 147 aa4.27□□□□□ -1.73
TRIM39-206ENST00000420746 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
TRIM39-206ENST00000420746 TEX49A0A1B0GTD5 131 aa4.26□□□□□ -1.73
TRIM39-206ENST00000420746 NDUFC2O95298 119 aa4.26□□□□□ -1.73
TRIM39-206ENST00000420746 SPRR2EP22531 72 aa4.26□□□□□ -1.73
TRIM39-206ENST00000420746 SPRR2BP35325 72 aa4.26□□□□□ -1.73
TRIM39-206ENST00000420746 SPRR2AP35326 72 aa4.26□□□□□ -1.73
TRIM39-206ENST00000420746 NDUFA6P56556 154 aa4.26□□□□□ -1.73
TRIM39-206ENST00000420746 TAL2Q16559 108 aa4.25□□□□□ -1.73
TRIM39-206ENST00000420746 TMEM170BQ5T4T1 132 aa4.25□□□□□ -1.73
TRIM39-206ENST00000420746 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
TRIM39-206ENST00000420746 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
TRIM39-206ENST00000420746 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
TRIM39-206ENST00000420746 COMMD7Q86VX2 200 aa4.22□□□□□ -1.73
TRIM39-206ENST00000420746 TMEM223A0PJW6 202 aa4.21□□□□□ -1.74
TRIM39-206ENST00000420746 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
TRIM39-206ENST00000420746 DEFB105AQ8NG35 78 aa4.21□□□□□ -1.74
TRIM39-206ENST00000420746 MIEN1Q9BRT3 115 aa4.21□□□□□ -1.74
TRIM39-206ENST00000420746 IGLV5-48A0A075B6I7 105 aa4.2□□□□□ -1.74
TRIM39-206ENST00000420746 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
TRIM39-206ENST00000420746 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
TRIM39-206ENST00000420746 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
TRIM39-206ENST00000420746 MYMXA0A1B0GTQ4 84 aa4.19□□□□□ -1.74
TRIM39-206ENST00000420746 HBDP02042 147 aa4.19□□□□□ -1.74
TRIM39-206ENST00000420746 ELOF1P60002 83 aaKnown RBP4.19□□□□□ -1.74
TRIM39-206ENST00000420746 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
TRIM39-206ENST00000420746 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
TRIM39-206ENST00000420746 TRBV7-7A0A0K0K1E9 115 aa4.17□□□□□ -1.74
TRIM39-206ENST00000420746 BAGE3Q86Y29 109 aa4.17□□□□□ -1.74
TRIM39-206ENST00000420746 C9JQL5 133 aa4.16□□□□□ -1.74
TRIM39-206ENST00000420746 MT1BP07438 61 aa4.16□□□□□ -1.74
TRIM39-206ENST00000420746 IFITM2Q01629 132 aa4.16□□□□□ -1.74
TRIM39-206ENST00000420746 SMCO4Q9NRQ5 59 aa4.16□□□□□ -1.74
TRIM39-206ENST00000420746 A0A096LNJ9 63 aa4.15□□□□□ -1.75
TRIM39-206ENST00000420746 COX7BP24311 80 aa4.15□□□□□ -1.75
TRIM39-206ENST00000420746 RGS21Q2M5E4 152 aa4.15□□□□□ -1.75
TRIM39-206ENST00000420746 RHEBQ15382 184 aa4.14□□□□□ -1.75
TRIM39-206ENST00000420746 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
TRIM39-206ENST00000420746 SOSTDC1Q6X4U4 206 aa4.14□□□□□ -1.75
TRIM39-206ENST00000420746 ZNF815PA8K554 130 aa4.13□□□□□ -1.75
TRIM39-206ENST00000420746 LST1O00453 97 aa4.13□□□□□ -1.75
TRIM39-206ENST00000420746 SPRR2DP22532 72 aa4.13□□□□□ -1.75
TRIM39-206ENST00000420746 Q6JHZ5 121 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms