RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CDK2AP2O75956 126 aa8.95□□□□□ -0.98
SHMT1P1-201ENST00000419974 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
SHMT1P1-201ENST00000419974 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
SHMT1P1-201ENST00000419974 ZNF73O43830 326 aaPredicted RBP8.94□□□□□ -0.98
SHMT1P1-201ENST00000419974 A0A1B0GX51 115 aa8.93□□□□□ -0.98
SHMT1P1-201ENST00000419974 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
SHMT1P1-201ENST00000419974 H7C2G1 150 aa8.93□□□□□ -0.98
SHMT1P1-201ENST00000419974 PSMB2P49721 201 aa8.93□□□□□ -0.98
SHMT1P1-201ENST00000419974 VAMP3Q15836 100 aa8.93□□□□□ -0.98
SHMT1P1-201ENST00000419974 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
SHMT1P1-201ENST00000419974 DIRC1Q969H9 104 aa8.92□□□□□ -0.98
SHMT1P1-201ENST00000419974 DPH3Q96FX2 82 aa8.92□□□□□ -0.98
SHMT1P1-201ENST00000419974 HSPG2P98160 4391 aa8.92□□□□□ -0.98
SHMT1P1-201ENST00000419974 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
SHMT1P1-201ENST00000419974 SCGB1C2P0DMR2 95 aa8.9□□□□□ -0.98
SHMT1P1-201ENST00000419974 ELOF1P60002 83 aaKnown RBP8.9□□□□□ -0.98
SHMT1P1-201ENST00000419974 CIRBP-AS1Q8TBR5 109 aa8.9□□□□□ -0.98
SHMT1P1-201ENST00000419974 GAGE10A6NGK3 116 aa8.89□□□□□ -0.99
SHMT1P1-201ENST00000419974 H0Y9J4 135 aa8.89□□□□□ -0.99
SHMT1P1-201ENST00000419974 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
SHMT1P1-201ENST00000419974 PHF5AQ7RTV0 110 aaKnown RBP8.89□□□□□ -0.99
SHMT1P1-201ENST00000419974 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
SHMT1P1-201ENST00000419974 RPL37AP8A6NKH3 93 aa8.88□□□□□ -0.99
SHMT1P1-201ENST00000419974 K7EP34 96 aa8.88□□□□□ -0.99
SHMT1P1-201ENST00000419974 LST1O00453 97 aa8.88□□□□□ -0.99
SHMT1P1-201ENST00000419974 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
SHMT1P1-201ENST00000419974 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
SHMT1P1-201ENST00000419974 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
SHMT1P1-201ENST00000419974 A0A1B0GV90 55 aa8.87□□□□□ -0.99
SHMT1P1-201ENST00000419974 TRACP01848 142 aa8.87□□□□□ -0.99
SHMT1P1-201ENST00000419974 ATXN8Q156A1 80 aa8.87□□□□□ -0.99
SHMT1P1-201ENST00000419974 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
SHMT1P1-201ENST00000419974 ABCA13Q86UQ4 5058 aa8.87□□□□□ -0.99
SHMT1P1-201ENST00000419974 TCL1BO95988 128 aa8.86□□□□□ -0.99
SHMT1P1-201ENST00000419974 LINC00575Q6W349 94 aa8.86□□□□□ -0.99
SHMT1P1-201ENST00000419974 SCXQ7RTU7 201 aa8.86□□□□□ -0.99
SHMT1P1-201ENST00000419974 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
SHMT1P1-201ENST00000419974 B5MCH6 92 aa8.85□□□□□ -0.99
SHMT1P1-201ENST00000419974 SNCGO76070 127 aa8.85□□□□□ -0.99
SHMT1P1-201ENST00000419974 COX7BP24311 80 aa8.85□□□□□ -0.99
SHMT1P1-201ENST00000419974 UBE2BP63146 152 aa8.85□□□□□ -0.99
SHMT1P1-201ENST00000419974 Q6ZRX8 168 aa8.85□□□□□ -0.99
SHMT1P1-201ENST00000419974 UBE2V1Q13404 147 aa8.84□□□□□ -0.99
SHMT1P1-201ENST00000419974 KRTAP11-1Q8IUC1 163 aa8.84□□□□□ -0.99
SHMT1P1-201ENST00000419974 LINC01600Q96MT4 127 aa8.84□□□□□ -0.99
SHMT1P1-201ENST00000419974 BCE1O60756 84 aa8.83□□□□□ -1
SHMT1P1-201ENST00000419974 FAM218AQ96MZ4 157 aa8.83□□□□□ -1
SHMT1P1-201ENST00000419974 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
SHMT1P1-201ENST00000419974 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
SHMT1P1-201ENST00000419974 CLEC2BQ92478 149 aa8.82□□□□□ -1
SHMT1P1-201ENST00000419974 hADV29S1A0JD25 119 aa8.81□□□□□ -1
SHMT1P1-201ENST00000419974 SLC25A20O43772 301 aa8.81□□□□□ -1
SHMT1P1-201ENST00000419974 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
SHMT1P1-201ENST00000419974 Q8N1X5 172 aa8.81□□□□□ -1
SHMT1P1-201ENST00000419974 KRTAP4-5Q9BYR2 181 aa8.81□□□□□ -1
SHMT1P1-201ENST00000419974 H3BMG7 143 aa8.8□□□□□ -1
SHMT1P1-201ENST00000419974 H3BQ85 93 aa8.8□□□□□ -1
SHMT1P1-201ENST00000419974 GHRHP01286 108 aa8.8□□□□□ -1
SHMT1P1-201ENST00000419974 XGP55808 180 aa8.8□□□□□ -1
SHMT1P1-201ENST00000419974 OCIAD2Q56VL3 154 aa8.8□□□□□ -1
SHMT1P1-201ENST00000419974 PSORS1C2Q9UIG4 136 aa8.8□□□□□ -1
SHMT1P1-201ENST00000419974 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.79□□□□□ -1
SHMT1P1-201ENST00000419974 Q9BRP9 147 aa8.79□□□□□ -1
SHMT1P1-201ENST00000419974 F8W1H4 67 aa8.78□□□□□ -1
SHMT1P1-201ENST00000419974 PRO0461Q9UI25 63 aa8.78□□□□□ -1
SHMT1P1-201ENST00000419974 DNAL4O96015 105 aa8.77□□□□□ -1.01
SHMT1P1-201ENST00000419974 FAM19A1Q7Z5A9 133 aa8.77□□□□□ -1.01
SHMT1P1-201ENST00000419974 SMCR5Q8TEV8 140 aa8.77□□□□□ -1.01
SHMT1P1-201ENST00000419974 PPDPFLQ8WWR9 84 aa8.77□□□□□ -1.01
SHMT1P1-201ENST00000419974 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
SHMT1P1-201ENST00000419974 H3BT86 120 aa8.76□□□□□ -1.01
SHMT1P1-201ENST00000419974 ZNF861PO60384 105 aa8.74□□□□□ -1.01
SHMT1P1-201ENST00000419974 IGLV5-48A0A075B6I7 105 aa8.73□□□□□ -1.01
SHMT1P1-201ENST00000419974 C9JAW5 83 aa8.73□□□□□ -1.01
SHMT1P1-201ENST00000419974 TMEM256-PLSCR3K7ERE1 68 aa8.73□□□□□ -1.01
SHMT1P1-201ENST00000419974 UBE2AP49459 152 aa8.73□□□□□ -1.01
SHMT1P1-201ENST00000419974 C1orf137Q5JT78 98 aa8.73□□□□□ -1.01
SHMT1P1-201ENST00000419974 ORMDL1Q9P0S3 153 aa8.73□□□□□ -1.01
SHMT1P1-201ENST00000419974 IGLV7-43P04211 117 aa8.72□□□□□ -1.01
SHMT1P1-201ENST00000419974 Q6ZQY7 126 aa8.72□□□□□ -1.01
SHMT1P1-201ENST00000419974 FAT1Q14517 4588 aa8.71□□□□□ -1.02
SHMT1P1-201ENST00000419974 PRLHP81277 87 aa8.71□□□□□ -1.02
SHMT1P1-201ENST00000419974 ANKRD29Q8N6D5 301 aa8.71□□□□□ -1.02
SHMT1P1-201ENST00000419974 BAALC-AS2P0C853 105 aa8.7□□□□□ -1.02
SHMT1P1-201ENST00000419974 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
SHMT1P1-201ENST00000419974 LINC01547P58512 204 aaPredicted RBP8.7□□□□□ -1.02
SHMT1P1-201ENST00000419974 ERC2-IT1O76042 136 aa8.69□□□□□ -1.02
SHMT1P1-201ENST00000419974 SPRR1BP22528 89 aa8.69□□□□□ -1.02
SHMT1P1-201ENST00000419974 HAMPP81172 84 aa8.67□□□□□ -1.02
SHMT1P1-201ENST00000419974 HIGD2AQ9BW72 106 aa8.67□□□□□ -1.02
SHMT1P1-201ENST00000419974 TEX49A0A1B0GTD5 131 aa8.66□□□□□ -1.02
SHMT1P1-201ENST00000419974 Q8N377 158 aa8.66□□□□□ -1.02
SHMT1P1-201ENST00000419974 ZNF706Q9Y5V0 76 aaPredicted RBP8.66□□□□□ -1.02
SHMT1P1-201ENST00000419974 OBSCN-AS1Q96MR7 158 aa8.65□□□□□ -1.02
SHMT1P1-201ENST00000419974 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
SHMT1P1-201ENST00000419974 RPL37AP61513 92 aaKnown RBP8.64□□□□□ -1.03
SHMT1P1-201ENST00000419974 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
SHMT1P1-201ENST00000419974 TEN1Q86WV5 123 aa8.63□□□□□ -1.03
SHMT1P1-201ENST00000419974 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
SHMT1P1-201ENST00000419974 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms