RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 STAB2Q8WWQ8 2551 aa9.45□□□□□ -0.9
HLA-DPA1-242ENST00000419277 SPRR1AP35321 89 aa9.43□□□□□ -0.9
HLA-DPA1-242ENST00000419277 PSCAO43653 123 aa9.42□□□□□ -0.9
HLA-DPA1-242ENST00000419277 IGLV1-50A0A075B6I6 118 aa9.42□□□□□ -0.9
HLA-DPA1-242ENST00000419277 SERTAD4-AS1Q5TG53 156 aa9.42□□□□□ -0.9
HLA-DPA1-242ENST00000419277 Q6ZRX8 168 aa9.42□□□□□ -0.9
HLA-DPA1-242ENST00000419277 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
HLA-DPA1-242ENST00000419277 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
HLA-DPA1-242ENST00000419277 A0A1B0GW54 56 aa9.4□□□□□ -0.9
HLA-DPA1-242ENST00000419277 C16orf90A8MZG2 172 aa9.4□□□□□ -0.9
HLA-DPA1-242ENST00000419277 CASC10Q5T4H9 136 aa9.39□□□□□ -0.91
HLA-DPA1-242ENST00000419277 FAM236AA0A1B0GUQ0 79 aa9.39□□□□□ -0.91
HLA-DPA1-242ENST00000419277 FAM236BA0A1B0GV22 79 aa9.39□□□□□ -0.91
HLA-DPA1-242ENST00000419277 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
HLA-DPA1-242ENST00000419277 DNAH1Q9P2D7 4330 aa9.38□□□□□ -0.91
HLA-DPA1-242ENST00000419277 ETDCA0A1B0GVM5 59 aa9.38□□□□□ -0.91
HLA-DPA1-242ENST00000419277 ATOX1O00244 68 aa9.37□□□□□ -0.91
HLA-DPA1-242ENST00000419277 HIST1H4AP62805 103 aaKnown RBP9.37□□□□□ -0.91
HLA-DPA1-242ENST00000419277 KRTAP1-5Q9BYS1 174 aa9.36□□□□□ -0.91
HLA-DPA1-242ENST00000419277 B5MCH6 92 aa9.36□□□□□ -0.91
HLA-DPA1-242ENST00000419277 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
HLA-DPA1-242ENST00000419277 DNAH9Q9NYC9 4486 aa9.34□□□□□ -0.91
HLA-DPA1-242ENST00000419277 NBDYA0A0U1RRE5 68 aa9.34□□□□□ -0.91
HLA-DPA1-242ENST00000419277 COL7A1Q02388 2944 aa9.34□□□□□ -0.91
HLA-DPA1-242ENST00000419277 IGLV5-48A0A075B6I7 105 aa9.33□□□□□ -0.92
HLA-DPA1-242ENST00000419277 CXCL6P80162 114 aa9.33□□□□□ -0.92
HLA-DPA1-242ENST00000419277 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
HLA-DPA1-242ENST00000419277 DYNC2H1Q8NCM8 4307 aaKnown RBP9.32□□□□□ -0.92
HLA-DPA1-242ENST00000419277 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
HLA-DPA1-242ENST00000419277 FAM168BA1KXE4 195 aa9.31□□□□□ -0.92
HLA-DPA1-242ENST00000419277 KRTAP7-1Q8IUC3 87 aa9.3□□□□□ -0.92
HLA-DPA1-242ENST00000419277 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
HLA-DPA1-242ENST00000419277 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
HLA-DPA1-242ENST00000419277 A0A096LNI7 61 aa9.28□□□□□ -0.92
HLA-DPA1-242ENST00000419277 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
HLA-DPA1-242ENST00000419277 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
HLA-DPA1-242ENST00000419277 UQCRQO14949 82 aa9.28□□□□□ -0.92
HLA-DPA1-242ENST00000419277 BCE1O60756 84 aa9.28□□□□□ -0.92
HLA-DPA1-242ENST00000419277 Q6ZVQ6 151 aa9.28□□□□□ -0.92
HLA-DPA1-242ENST00000419277 Q9BRP9 147 aa9.28□□□□□ -0.92
HLA-DPA1-242ENST00000419277 Q8N377 158 aa9.27□□□□□ -0.93
HLA-DPA1-242ENST00000419277 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
HLA-DPA1-242ENST00000419277 H0Y9J4 135 aa9.26□□□□□ -0.93
HLA-DPA1-242ENST00000419277 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
HLA-DPA1-242ENST00000419277 LINC01547P58512 204 aaPredicted RBP9.25□□□□□ -0.93
HLA-DPA1-242ENST00000419277 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
HLA-DPA1-242ENST00000419277 UBE2BP63146 152 aa9.25□□□□□ -0.93
HLA-DPA1-242ENST00000419277 TNP2Q05952 138 aa9.24□□□□□ -0.93
HLA-DPA1-242ENST00000419277 IGKV2-24A0A0C4DH68 120 aa9.22□□□□□ -0.93
HLA-DPA1-242ENST00000419277 COX7CP15954 63 aa9.22□□□□□ -0.93
HLA-DPA1-242ENST00000419277 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
HLA-DPA1-242ENST00000419277 C3orf22Q8N5N4 141 aa9.22□□□□□ -0.93
HLA-DPA1-242ENST00000419277 F8WEM9 126 aa9.21□□□□□ -0.94
HLA-DPA1-242ENST00000419277 SERP2Q8N6R1 65 aa9.21□□□□□ -0.94
HLA-DPA1-242ENST00000419277 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
HLA-DPA1-242ENST00000419277 CCDC179H3BU77 68 aa9.2□□□□□ -0.94
HLA-DPA1-242ENST00000419277 HAMPP81172 84 aa9.2□□□□□ -0.94
HLA-DPA1-242ENST00000419277 DEFB105AQ8NG35 78 aa9.19□□□□□ -0.94
HLA-DPA1-242ENST00000419277 A0A1W2PNN7 141 aa9.19□□□□□ -0.94
HLA-DPA1-242ENST00000419277 M0R2N4 97 aa9.19□□□□□ -0.94
HLA-DPA1-242ENST00000419277 KRTAP21-3Q3LHN1 58 aa9.19□□□□□ -0.94
HLA-DPA1-242ENST00000419277 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
HLA-DPA1-242ENST00000419277 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
HLA-DPA1-242ENST00000419277 Q8NBF4 154 aa9.18□□□□□ -0.94
HLA-DPA1-242ENST00000419277 SPRR4Q96PI1 79 aa9.18□□□□□ -0.94
HLA-DPA1-242ENST00000419277 A0A087WVE0 104 aa9.17□□□□□ -0.94
HLA-DPA1-242ENST00000419277 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
HLA-DPA1-242ENST00000419277 CRYGAP11844 174 aa9.17□□□□□ -0.94
HLA-DPA1-242ENST00000419277 NREPQ16612 68 aa9.17□□□□□ -0.94
HLA-DPA1-242ENST00000419277 IGLV8-61A0A075B6I0 122 aa9.16□□□□□ -0.94
HLA-DPA1-242ENST00000419277 C9orf153Q5TBE3 101 aa9.16□□□□□ -0.94
HLA-DPA1-242ENST00000419277 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.94
HLA-DPA1-242ENST00000419277 SPRR1BP22528 89 aa9.14□□□□□ -0.95
HLA-DPA1-242ENST00000419277 Q6ZR54 194 aa9.14□□□□□ -0.95
HLA-DPA1-242ENST00000419277 A0A087WTM6 91 aa9.14□□□□□ -0.95
HLA-DPA1-242ENST00000419277 ERC2-IT1O76042 136 aa9.13□□□□□ -0.95
HLA-DPA1-242ENST00000419277 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
HLA-DPA1-242ENST00000419277 LYSTQ99698 3801 aa9.12□□□□□ -0.95
HLA-DPA1-242ENST00000419277 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
HLA-DPA1-242ENST00000419277 SMIM29Q86T20 159 aa9.11□□□□□ -0.95
HLA-DPA1-242ENST00000419277 DNAH7Q8WXX0 4024 aa9.11□□□□□ -0.95
HLA-DPA1-242ENST00000419277 BPY2O14599 106 aa9.11□□□□□ -0.95
HLA-DPA1-242ENST00000419277 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
HLA-DPA1-242ENST00000419277 A0A1W2PNM2 257 aa9.1□□□□□ -0.95
HLA-DPA1-242ENST00000419277 CHTF8P0CG12 524 aa9.1□□□□□ -0.95
HLA-DPA1-242ENST00000419277 PRLHP81277 87 aa9.1□□□□□ -0.95
HLA-DPA1-242ENST00000419277 PHF5AQ7RTV0 110 aaKnown RBP9.09□□□□□ -0.95
HLA-DPA1-242ENST00000419277 TRAV7A0A075B6U4 112 aa9.08□□□□□ -0.96
HLA-DPA1-242ENST00000419277 UBE2AP49459 152 aa9.08□□□□□ -0.96
HLA-DPA1-242ENST00000419277 LINC00476Q8WZB0 136 aa9.08□□□□□ -0.96
HLA-DPA1-242ENST00000419277 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
HLA-DPA1-242ENST00000419277 TENM2Q9NT68 2774 aa9.08□□□□□ -0.96
HLA-DPA1-242ENST00000419277 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
HLA-DPA1-242ENST00000419277 DNAH10Q8IVF4 4471 aa9.07□□□□□ -0.96
HLA-DPA1-242ENST00000419277 VPS13DQ5THJ4 4388 aa9.07□□□□□ -0.96
HLA-DPA1-242ENST00000419277 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
HLA-DPA1-242ENST00000419277 MEGF8Q7Z7M0 2845 aa9.06□□□□□ -0.96
HLA-DPA1-242ENST00000419277 RTL8CO15255 209 aa9.05□□□□□ -0.96
HLA-DPA1-242ENST00000419277 C1orf134Q5TEV5 83 aa9.05□□□□□ -0.96
HLA-DPA1-242ENST00000419277 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms