RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 ATMQ13315 3056 aa0.75□□□□□ -2.29
PTPRC-207ENST00000418674 KIAA0556O60303 1618 aa0.75□□□□□ -2.29
PTPRC-207ENST00000418674 DNAJC13O75165 2243 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 MAP3K1Q13233 1512 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 LRRC7Q96NW7 1537 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 RRBP1Q9P2E9 1410 aaKnown RBP0.74□□□□□ -2.29
PTPRC-207ENST00000418674 MGAM2Q2M2H8 2515 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 SPTA1P02549 2419 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 CSMD2Q7Z408 3487 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 APCP25054 2843 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 A0A0D9SFI3 127 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 MYMXA0A1B0GTQ4 84 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 SPINK7P58062 85 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 C6orf201Q7Z4U5 140 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 PLAC8Q9NZF1 115 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 PAPPAQ13219 1627 aa0.74□□□□□ -2.29
PTPRC-207ENST00000418674 PTPRZ1P23471 2315 aaPredicted RBP0.73□□□□□ -2.29
PTPRC-207ENST00000418674 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
PTPRC-207ENST00000418674 STAB2Q8WWQ8 2551 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 A0A1B0GU69 56 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 COX6A2Q02221 97 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 PLGLAQ15195 96 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 UBE2D4Q9Y2X8 147 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 PTPN23Q9H3S7 1636 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 CFAP74Q9C0B2 1584 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 ASXL3Q9C0F0 2248 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 KCPQ6ZWJ8 1503 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.73□□□□□ -2.29
PTPRC-207ENST00000418674 TRIOO75962 3097 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 RGPD2P0DJD1 1756 aa0.73□□□□□ -2.29
PTPRC-207ENST00000418674 RGPD1P0DJD0 1748 aa0.72□□□□□ -2.29
PTPRC-207ENST00000418674 DSPP15924 2871 aaKnown RBP0.72□□□□□ -2.29
PTPRC-207ENST00000418674 RIF1Q5UIP0 2472 aaKnown RBP0.72□□□□□ -2.29
PTPRC-207ENST00000418674 SAMD9Q5K651 1589 aa0.72□□□□□ -2.29
PTPRC-207ENST00000418674 CNFNQ9BYD5 112 aa0.72□□□□□ -2.29
PTPRC-207ENST00000418674 SSPOA2VEC9 5147 aa0.72□□□□□ -2.29
PTPRC-207ENST00000418674 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
PTPRC-207ENST00000418674 LRRC9Q6ZRR7 1453 aa0.72□□□□□ -2.29
PTPRC-207ENST00000418674 SPENQ96T58 3664 aaKnown RBP0.71□□□□□ -2.3
PTPRC-207ENST00000418674 SCN11AQ9UI33 1791 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 TULP4Q9NRJ4 1543 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
PTPRC-207ENST00000418674 TRBV7-4A0A0J9YYF1 115 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 CEBPZOSA8MTT3 80 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 H3BUT2 72 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 TP53AIP1Q9HCN2 124 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 SONP18583 2426 aaKnown RBP0.71□□□□□ -2.3
PTPRC-207ENST00000418674 LRRC37AA6NMS7 1700 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 QSER1Q2KHR3 1735 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 MYO5CQ9NQX4 1742 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 ATP7BP35670 1465 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 FAM186AA6NE01 2351 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 UBR3Q6ZT12 1888 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 PIK3C2BO00750 1634 aa0.71□□□□□ -2.3
PTPRC-207ENST00000418674 THOC2Q8NI27 1593 aaKnown RBP0.7□□□□□ -2.3
PTPRC-207ENST00000418674 ABCC1P33527 1531 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 LINC00959A0A1B0GUT2 108 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 IGLC3P0DOY3 106 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 BVES-AS1Q5T3Y7 98 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 DEFB123Q8N688 67 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 PRO0255Q9UI72 69 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 MAP1AP78559 2803 aaPredicted RBP0.7□□□□□ -2.3
PTPRC-207ENST00000418674 COL7A1Q02388 2944 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 ABCA8O94911 1581 aa0.7□□□□□ -2.3
PTPRC-207ENST00000418674 POLR1AO95602 1720 aaPredicted RBP0.69□□□□□ -2.3
PTPRC-207ENST00000418674 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
PTPRC-207ENST00000418674 DCHS2Q6V1P9 2916 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 HIVEP1P15822 2718 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 SVEP1Q4LDE5 3571 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 IQGAP3Q86VI3 1631 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 A0A1B0GUT8 65 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 I3L2K1 104 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 IGLC2P0DOY2 106 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 PRB3Q04118 309 aaPredicted RBP0.69□□□□□ -2.3
PTPRC-207ENST00000418674 PIGYQ3MUY2 71 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 ARFGEF2Q9Y6D5 1785 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 ADGRG4Q8IZF6 3080 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 CLASP1Q7Z460 1538 aa0.69□□□□□ -2.3
PTPRC-207ENST00000418674 BIVM-ERCC5R4GMW8 1640 aa0.68□□□□□ -2.3
PTPRC-207ENST00000418674 DEFB112Q30KQ8 113 aa0.68□□□□□ -2.3
PTPRC-207ENST00000418674 ANKARQ7Z5J8 1434 aa0.68□□□□□ -2.3
PTPRC-207ENST00000418674 TIAM2Q8IVF5 1701 aa0.68□□□□□ -2.3
PTPRC-207ENST00000418674 DMBT1Q9UGM3 2413 aaPredicted RBP0.68□□□□□ -2.3
PTPRC-207ENST00000418674 ZNF831Q5JPB2 1677 aa0.68□□□□□ -2.3
PTPRC-207ENST00000418674 SPTBN2O15020 2390 aa0.68□□□□□ -2.3
PTPRC-207ENST00000418674 CHD7Q9P2D1 2997 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 FMN2Q9NZ56 1722 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 TSC2P49815 1807 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 FXYD6-FXYD2A0A087WZ82 144 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 CFAP43Q8NDM7 1665 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 SLIT1O75093 1534 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 CUBNO60494 3623 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 KMT2DO14686 5537 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 AHCTF1Q8WYP5 2266 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 CCDC88BA6NC98 1476 aa0.67□□□□□ -2.3
PTPRC-207ENST00000418674 NKTRP30414 1462 aaKnown RBP0.67□□□□□ -2.3
PTPRC-207ENST00000418674 CENPEQ02224 2701 aa0.66□□□□□ -2.3
PTPRC-207ENST00000418674 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms