RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 MIR22HGQ0VDD5 57 aa11.82□□□□□ -0.52
UBR3-203ENST00000418381 LINC00336Q6ZUF6 198 aa11.82□□□□□ -0.52
UBR3-203ENST00000418381 VPREB1P12018 145 aa11.81□□□□□ -0.52
UBR3-203ENST00000418381 H3BPC8 53 aa11.81□□□□□ -0.52
UBR3-203ENST00000418381 CAMK2N1Q7Z7J9 78 aa11.81□□□□□ -0.52
UBR3-203ENST00000418381 IGLV5-45A0A087WSX0 123 aa11.8□□□□□ -0.52
UBR3-203ENST00000418381 A0A0G2JQZ4 141 aa11.8□□□□□ -0.52
UBR3-203ENST00000418381 A0A1W2PNN7 141 aa11.8□□□□□ -0.52
UBR3-203ENST00000418381 ANKRD11Q6UB99 2663 aaPredicted RBP11.8□□□□□ -0.52
UBR3-203ENST00000418381 LUZP6Q538Z0 58 aa11.77□□□□□ -0.52
UBR3-203ENST00000418381 A0A096LNJ9 63 aa11.76□□□□□ -0.53
UBR3-203ENST00000418381 MTORP42345 2549 aa11.76□□□□□ -0.53
UBR3-203ENST00000418381 USP24Q9UPU5 2620 aa11.76□□□□□ -0.53
UBR3-203ENST00000418381 C5orf42Q9H799 3197 aa11.75□□□□□ -0.53
UBR3-203ENST00000418381 IGFL1Q6UW32 110 aa11.73□□□□□ -0.53
UBR3-203ENST00000418381 COX8CQ7Z4L0 72 aa11.73□□□□□ -0.53
UBR3-203ENST00000418381 C8orf17Q9NRJ1 99 aa11.72□□□□□ -0.53
UBR3-203ENST00000418381 CEP350Q5VT06 3117 aa11.72□□□□□ -0.53
UBR3-203ENST00000418381 IGLV7-43P04211 117 aa11.72□□□□□ -0.53
UBR3-203ENST00000418381 LOC110117498A0A087WWA1 95 aa11.72□□□□□ -0.53
UBR3-203ENST00000418381 A0A1B0GVX0 72 aa11.71□□□□□ -0.53
UBR3-203ENST00000418381 A0A1B0GW54 56 aa11.71□□□□□ -0.54
UBR3-203ENST00000418381 CDC42SE1Q9NRR8 79 aa11.69□□□□□ -0.54
UBR3-203ENST00000418381 PSORS1C2Q9UIG4 136 aa11.69□□□□□ -0.54
UBR3-203ENST00000418381 LINC00483Q53H64 154 aa11.68□□□□□ -0.54
UBR3-203ENST00000418381 FASNP49327 2511 aaKnown RBP11.68□□□□□ -0.54
UBR3-203ENST00000418381 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
UBR3-203ENST00000418381 PRO0628Q9UI54 55 aa11.66□□□□□ -0.54
UBR3-203ENST00000418381 PRR15Q8IV56 129 aa11.64□□□□□ -0.55
UBR3-203ENST00000418381 A8MUN3 132 aa11.63□□□□□ -0.55
UBR3-203ENST00000418381 PRRC2CQ9Y520 2896 aaKnown RBP11.59□□□□□ -0.55
UBR3-203ENST00000418381 CHD8Q9HCK8 2581 aa11.56□□□□□ -0.56
UBR3-203ENST00000418381 KRTAP10-3P60369 221 aa11.56□□□□□ -0.56
UBR3-203ENST00000418381 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
UBR3-203ENST00000418381 PRR26Q8N8Z3 221 aa11.55□□□□□ -0.56
UBR3-203ENST00000418381 KCNQ1DNQ9H478 68 aa11.55□□□□□ -0.56
UBR3-203ENST00000418381 C9orf163Q8N9P6 203 aa11.54□□□□□ -0.56
UBR3-203ENST00000418381 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
UBR3-203ENST00000418381 LINC01546A6NGU7 62 aa11.52□□□□□ -0.57
UBR3-203ENST00000418381 TNP2Q05952 138 aa11.52□□□□□ -0.57
UBR3-203ENST00000418381 CASC10Q5T4H9 136 aa11.5□□□□□ -0.57
UBR3-203ENST00000418381 Q8N377 158 aa11.5□□□□□ -0.57
UBR3-203ENST00000418381 C19orf73Q9NVV2 129 aa11.5□□□□□ -0.57
UBR3-203ENST00000418381 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
UBR3-203ENST00000418381 C10orf142B7Z368 130 aa11.49□□□□□ -0.57
UBR3-203ENST00000418381 LINC00612Q8N6U2 182 aa11.49□□□□□ -0.57
UBR3-203ENST00000418381 USP9YO00507 2555 aaPredicted RBP11.48□□□□□ -0.57
UBR3-203ENST00000418381 SMCPP49901 116 aaPredicted RBP11.47□□□□□ -0.57
UBR3-203ENST00000418381 SPRR4Q96PI1 79 aa11.45□□□□□ -0.58
UBR3-203ENST00000418381 RPS28P62857 69 aaKnown RBP11.44□□□□□ -0.58
UBR3-203ENST00000418381 Q5VSD8 79 aa11.44□□□□□ -0.58
UBR3-203ENST00000418381 HRES1P13985 223 aa11.43□□□□□ -0.58
UBR3-203ENST00000418381 CYP4F30PQ9H0H9 118 aa11.43□□□□□ -0.58
UBR3-203ENST00000418381 ERC2-IT1O76042 136 aa11.42□□□□□ -0.58
UBR3-203ENST00000418381 S4R3F8 94 aa11.42□□□□□ -0.58
UBR3-203ENST00000418381 CD164Q04900 197 aa11.37□□□□□ -0.59
UBR3-203ENST00000418381 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
UBR3-203ENST00000418381 WIPF1O43516 503 aa11.32□□□□□ -0.6
UBR3-203ENST00000418381 PRR34Q9NV39 138 aa11.29□□□□□ -0.6
UBR3-203ENST00000418381 MKI67P46013 3256 aaKnown RBP11.27□□□□□ -0.61
UBR3-203ENST00000418381 Q1T7F1 81 aa11.27□□□□□ -0.61
UBR3-203ENST00000418381 CFAP54Q96N23 3096 aa11.26□□□□□ -0.61
UBR3-203ENST00000418381 LAMA2P24043 3122 aaKnown RBP11.26□□□□□ -0.61
UBR3-203ENST00000418381 CEP295Q9C0D2 2601 aa11.26□□□□□ -0.61
UBR3-203ENST00000418381 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
UBR3-203ENST00000418381 R4GN34 69 aa11.25□□□□□ -0.61
UBR3-203ENST00000418381 PLAC4Q8WY50 150 aa11.25□□□□□ -0.61
UBR3-203ENST00000418381 CNBPP62633 177 aaKnown RBP11.24□□□□□ -0.61
UBR3-203ENST00000418381 A0A0C4DFX4 3053 aa11.24□□□□□ -0.61
UBR3-203ENST00000418381 A0A1B0GU33 70 aa11.24□□□□□ -0.61
UBR3-203ENST00000418381 LITAFQ99732 161 aa11.23□□□□□ -0.61
UBR3-203ENST00000418381 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.22□□□□□ -0.61
UBR3-203ENST00000418381 XIRP2A4UGR9 3374 aa11.21□□□□□ -0.61
UBR3-203ENST00000418381 SEC61BP60468 96 aaKnown RBP11.2□□□□□ -0.62
UBR3-203ENST00000418381 GIG44P09565 113 aaPredicted RBP11.19□□□□□ -0.62
UBR3-203ENST00000418381 MGAM2Q2M2H8 2515 aa11.19□□□□□ -0.62
UBR3-203ENST00000418381 EPG5Q9HCE0 2579 aa11.17□□□□□ -0.62
UBR3-203ENST00000418381 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.62
UBR3-203ENST00000418381 KTN1-AS1Q86SY8 53 aa11.15□□□□□ -0.63
UBR3-203ENST00000418381 LCA10Q71F78 164 aa11.12□□□□□ -0.63
UBR3-203ENST00000418381 H1FX-AS1Q4G0G2 97 aa11.11□□□□□ -0.63
UBR3-203ENST00000418381 CFAP46Q8IYW2 2715 aa11.11□□□□□ -0.63
UBR3-203ENST00000418381 A0A1W2PNM2 257 aa11.07□□□□□ -0.64
UBR3-203ENST00000418381 BRCA2P51587 3418 aa11.06□□□□□ -0.64
UBR3-203ENST00000418381 ZCCHC13Q8WW36 166 aaKnown RBP11.05□□□□□ -0.64
UBR3-203ENST00000418381 HECTD1Q9ULT8 2610 aa11.05□□□□□ -0.64
UBR3-203ENST00000418381 SPINK7P58062 85 aa11.04□□□□□ -0.64
UBR3-203ENST00000418381 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
UBR3-203ENST00000418381 M0QZ58 72 aa11.01□□□□□ -0.65
UBR3-203ENST00000418381 A0A096LNT2 108 aa11.01□□□□□ -0.65
UBR3-203ENST00000418381 SPANXA2-OT1Q8N9U9 137 aa11□□□□□ -0.65
UBR3-203ENST00000418381 CELSR3Q9NYQ7 3312 aa10.99□□□□□ -0.65
UBR3-203ENST00000418381 KRTAP1-3Q8IUG1 177 aa10.99□□□□□ -0.65
UBR3-203ENST00000418381 KLKP1Q107X0 134 aa10.98□□□□□ -0.65
UBR3-203ENST00000418381 H7BZZ5 65 aa10.96□□□□□ -0.65
UBR3-203ENST00000418381 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
UBR3-203ENST00000418381 DNAH14Q0VDD8 3507 aa10.94□□□□□ -0.66
UBR3-203ENST00000418381 A0A0A0MQY5 61 aa10.93□□□□□ -0.66
UBR3-203ENST00000418381 CHD7Q9P2D1 2997 aa10.93□□□□□ -0.66
UBR3-203ENST00000418381 LAMA3Q16787 3333 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms