RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 C10orf25Q5T742 122 aa6.05□□□□□ -1.44
CHRNA1-206ENST00000416004 UNQ6190/PRO20217Q6UXQ8 127 aa6.04□□□□□ -1.44
CHRNA1-206ENST00000416004 LECT2O14960 151 aa6.03□□□□□ -1.44
CHRNA1-206ENST00000416004 C14orf177Q52M58 125 aa6.03□□□□□ -1.44
CHRNA1-206ENST00000416004 Q8N814 137 aa6.03□□□□□ -1.44
CHRNA1-206ENST00000416004 CIRBPQ14011 172 aaKnown RBP6.02□□□□□ -1.44
CHRNA1-206ENST00000416004 C9orf116Q5BN46 136 aaPredicted RBP6.02□□□□□ -1.44
CHRNA1-206ENST00000416004 GVQW2A0A096LPI5 108 aaPredicted RBP6.02□□□□□ -1.45
CHRNA1-206ENST00000416004 EPM2AB3EWF7 344 aa6.02□□□□□ -1.45
CHRNA1-206ENST00000416004 USP17L23D6RBM5 183 aa6.02□□□□□ -1.45
CHRNA1-206ENST00000416004 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
CHRNA1-206ENST00000416004 NPC2P61916 151 aa6.02□□□□□ -1.45
CHRNA1-206ENST00000416004 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
CHRNA1-206ENST00000416004 LRCOL1A6NCL2 159 aa6.01□□□□□ -1.45
CHRNA1-206ENST00000416004 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
CHRNA1-206ENST00000416004 OXTP01178 125 aa6.01□□□□□ -1.45
CHRNA1-206ENST00000416004 PFN2P35080 140 aa6.01□□□□□ -1.45
CHRNA1-206ENST00000416004 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
CHRNA1-206ENST00000416004 HRCT1Q6UXD1 115 aa6.01□□□□□ -1.45
CHRNA1-206ENST00000416004 SOSTDC1Q6X4U4 206 aa6.01□□□□□ -1.45
CHRNA1-206ENST00000416004 DNAL4O96015 105 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 SLPIP03973 132 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 ATP5EP2Q5VTU8 51 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 MIR7-3HGQ8N6C7 128 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 LINC00158P58513 81 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 Q6ZRU5 148 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 CAMK2N2Q96S95 79 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 DSCR8Q96T75 97 aa6□□□□□ -1.45
CHRNA1-206ENST00000416004 BCE1O60756 84 aa5.99□□□□□ -1.45
CHRNA1-206ENST00000416004 S100A7L2Q5SY68 101 aa5.99□□□□□ -1.45
CHRNA1-206ENST00000416004 Q8N1X5 172 aa5.99□□□□□ -1.45
CHRNA1-206ENST00000416004 LINC00308Q8TCZ7 52 aa5.99□□□□□ -1.45
CHRNA1-206ENST00000416004 CYSTM1Q9H1C7 97 aa5.99□□□□□ -1.45
CHRNA1-206ENST00000416004 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.98□□□□□ -1.45
CHRNA1-206ENST00000416004 FUSP35637 526 aaKnown RBP eCLIP5.98□□□□□ -1.45
CHRNA1-206ENST00000416004 OBSCN-AS1Q96MR7 158 aa5.98□□□□□ -1.45
CHRNA1-206ENST00000416004 SERP1Q9Y6X1 66 aa5.98□□□□□ -1.45
CHRNA1-206ENST00000416004 DNAH11Q96DT5 4516 aa5.98□□□□□ -1.45
CHRNA1-206ENST00000416004 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
CHRNA1-206ENST00000416004 FAM229AH3BQW9 127 aa5.97□□□□□ -1.45
CHRNA1-206ENST00000416004 SYCNQ0VAF6 134 aa5.97□□□□□ -1.45
CHRNA1-206ENST00000416004 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
CHRNA1-206ENST00000416004 KRTAP10-1P60331 282 aa5.96□□□□□ -1.45
CHRNA1-206ENST00000416004 FAM236DA0A1B0GTK5 79 aa5.96□□□□□ -1.46
CHRNA1-206ENST00000416004 FAM236CP0DP71 79 aa5.96□□□□□ -1.46
CHRNA1-206ENST00000416004 RPL28P46779 137 aaKnown RBP5.96□□□□□ -1.46
CHRNA1-206ENST00000416004 COX17Q14061 63 aa5.96□□□□□ -1.46
CHRNA1-206ENST00000416004 SND1-IT1Q9HBX3 110 aa5.96□□□□□ -1.46
CHRNA1-206ENST00000416004 HERC2O95714 4834 aa5.96□□□□□ -1.46
CHRNA1-206ENST00000416004 DYNC1H1Q14204 4646 aaKnown RBP5.95□□□□□ -1.46
CHRNA1-206ENST00000416004 TRAV13-2A0A0B4J235 113 aa5.95□□□□□ -1.46
CHRNA1-206ENST00000416004 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
CHRNA1-206ENST00000416004 Q8NDZ9 215 aa5.94□□□□□ -1.46
CHRNA1-206ENST00000416004 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
CHRNA1-206ENST00000416004 H0YGX0 51 aa5.93□□□□□ -1.46
CHRNA1-206ENST00000416004 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
CHRNA1-206ENST00000416004 Q6ZRP5 223 aa5.93□□□□□ -1.46
CHRNA1-206ENST00000416004 XAGE1AQ9HD64 81 aa5.93□□□□□ -1.46
CHRNA1-206ENST00000416004 SMIM26A0A096LP01 95 aa5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 PRR3P79522 188 aaKnown RBP5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 Q5VSD8 79 aa5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 LINC00846Q9NV44 126 aa5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 PLA2G1BP04054 148 aaKnown RBP5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 ATP5EP56381 51 aaPredicted RBP5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 CNBPP62633 177 aaKnown RBP5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 FAM218AQ96MZ4 157 aa5.92□□□□□ -1.46
CHRNA1-206ENST00000416004 IGKV3D-7A0A0C4DH55 119 aa5.91□□□□□ -1.46
CHRNA1-206ENST00000416004 GHRHP01286 108 aa5.91□□□□□ -1.46
CHRNA1-206ENST00000416004 SMR3BP02814 79 aaPredicted RBP5.9□□□□□ -1.46
CHRNA1-206ENST00000416004 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
CHRNA1-206ENST00000416004 TLX1NBP0CAT3 122 aa5.9□□□□□ -1.47
CHRNA1-206ENST00000416004 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.47
CHRNA1-206ENST00000416004 C14orf132Q9NPU4 83 aa5.9□□□□□ -1.47
CHRNA1-206ENST00000416004 RYR1P21817 5038 aa5.89□□□□□ -1.47
CHRNA1-206ENST00000416004 A0A087WVE0 104 aa5.89□□□□□ -1.47
CHRNA1-206ENST00000416004 NDUFC1O43677 76 aa5.89□□□□□ -1.47
CHRNA1-206ENST00000416004 CCKP06307 115 aa5.89□□□□□ -1.47
CHRNA1-206ENST00000416004 KLKP1Q107X0 134 aa5.89□□□□□ -1.47
CHRNA1-206ENST00000416004 PKIGQ9Y2B9 76 aa5.89□□□□□ -1.47
CHRNA1-206ENST00000416004 LRP1BQ9NZR2 4599 aa5.89□□□□□ -1.47
CHRNA1-206ENST00000416004 TRAV7A0A075B6U4 112 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 JMJD7-PLA2G4BH0Y9G9 81 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 HAMPP81172 84 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 V9GYY9 64 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 H7BZZ5 65 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 NCR3O14931 201 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 Q6ZSA8 131 aa5.88□□□□□ -1.47
CHRNA1-206ENST00000416004 VPREB1P12018 145 aa5.87□□□□□ -1.47
CHRNA1-206ENST00000416004 SERTAD4-AS1Q5TG53 156 aa5.87□□□□□ -1.47
CHRNA1-206ENST00000416004 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
CHRNA1-206ENST00000416004 FAM30AQ9NZY2 134 aa5.87□□□□□ -1.47
CHRNA1-206ENST00000416004 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
CHRNA1-206ENST00000416004 A0A096LNI7 61 aa5.86□□□□□ -1.47
CHRNA1-206ENST00000416004 FAM168BA1KXE4 195 aa5.86□□□□□ -1.47
CHRNA1-206ENST00000416004 SEC61GP60059 68 aa5.86□□□□□ -1.47
CHRNA1-206ENST00000416004 KRTAP7-1Q8IUC3 87 aa5.86□□□□□ -1.47
CHRNA1-206ENST00000416004 LINC00528Q8N1L1 170 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms