RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 PPP3R2Q96LZ3 170 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 LINC00846Q9NV44 126 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 PSENENQ9NZ42 101 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 CRIPTQ9P021 101 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 PAIP2BQ9ULR5 123 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 ANKRD36CQ5JPF3 1778 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 MON2Q7Z3U7 1717 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 TET3O43151 1660 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 USP32Q8NFA0 1604 aa-0.27□□□□□ -2.45
TRAPPC13-203ENST00000415825 SAMD9Q5K651 1589 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 CDC42BPGQ6DT37 1551 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 INO80Q9ULG1 1556 aaPredicted RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 EPRSP07814 1512 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAM135AQ9P2D6 1515 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 MKI67P46013 3256 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 FANCAO15360 1455 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 NAIPQ13075 1403 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 CEP350Q5VT06 3117 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 BTAF1O14981 1849 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 CPSF4LA6NMK7 179 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 APOC2P02655 101 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 HMGN1P05114 100 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 TNP1P09430 55 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 COX6CP09669 75 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 C3orf79P0CE67 100 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 AKAIN1P0CW23 69 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 MT1GP13640 62 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 FGF7P21781 194 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 S100A12P80511 92 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 DEFB110Q30KQ9 67 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 C9orf153Q5TBE3 101 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 KRTAP8-1Q8IUC2 63 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 FAM223AQ8IWN6 122 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 MRPL34Q9BQ48 92 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 UQCR10Q9UDW1 63 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 S4R3F8 94 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 CHD1O14646 1710 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 PHLPP1O60346 1717 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 ITSN1Q15811 1721 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 SUPT6HQ7KZ85 1726 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 UBR1Q8IWV7 1749 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 ZC3H13Q5T200 1668 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 TOP2BQ02880 1626 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 EIF4G3O43432 1585 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 NWD1Q149M9 1564 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 DNMBPQ6XZF7 1577 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 KIAA0586Q9BVV6 1533 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 SACSQ9NZJ4 4579 aa-0.28□□□□□ -2.45
TRAPPC13-203ENST00000415825 ADGRL2O95490 1459 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 ZFHX4Q86UP3 3567 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 UBR3Q6ZT12 1888 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LTN1O94822 1766 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LY75O60449 1722 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 POLR1AO95602 1720 aaPredicted RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 DDX60LQ5H9U9 1706 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LRRIQ1Q96JM4 1722 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 PARP4Q9UKK3 1724 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 TOGARAM1Q9Y4F4 1720 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 CLTCQ00610 1675 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 KIF1AQ12756 1690 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 PLCH1Q4KWH8 1693 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 NHSQ6T4R5 1651 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 ITSN2Q9NZM3 1697 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 SPTY2D1-AS1A0A0U1RR47 76 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 MMP24-AS1A0A0U1RRL7 71 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LCE6AA0A183 80 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LINC01546A6NGU7 62 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 FAM223BA6NKX1 122 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LYNX1G3V0Z9 82 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 H3BQF6 201 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 DLEU1O43261 78 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 MPC2O95563 127 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 S100PP25815 95 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 SNCAP37840 140 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 SEC11AP67812 179 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 PSMG4Q5JS54 123 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 ALKAL2Q6UX46 152 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 HEPN1Q6WQI6 88 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 WFDC13Q8IUB5 93 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 C8orf59Q8N0T1 100 aaPredicted RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LINC01600Q96MT4 127 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 NXT2Q9NPJ8 142 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 APLNQ9ULZ1 77 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 UBE2D4Q9Y2X8 147 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 AP4S1Q9Y587 144 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 ARL2-SNX15V9GYD0 113 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 ABCA13Q86UQ4 5058 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 LRRC7Q96NW7 1537 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 WDFY4Q6ZS81 3184 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 MAGI2Q86UL8 1455 aa-0.29□□□□□ -2.46
TRAPPC13-203ENST00000415825 SCAPERQ9BY12 1400 aa-0.3□□□□□ -2.46
TRAPPC13-203ENST00000415825 KTN1Q86UP2 1357 aaKnown RBP-0.3□□□□□ -2.46
TRAPPC13-203ENST00000415825 ANKRD36BQ8N2N9 1353 aa-0.3□□□□□ -2.46
TRAPPC13-203ENST00000415825 ROBO1Q9Y6N7 1651 aa-0.3□□□□□ -2.46
TRAPPC13-203ENST00000415825 RNF17Q9BXT8 1623 aaKnown RBP-0.3□□□□□ -2.46
TRAPPC13-203ENST00000415825 PCNTO95613 3336 aa-0.3□□□□□ -2.46
TRAPPC13-203ENST00000415825 DNAH9Q9NYC9 4486 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms