RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 TRAV23DV6A0A075B6W5 121 aa14.29□□□□□ -0.12
HLA-C-204ENST00000415537 A0A0U1RQV1 116 aa14.29□□□□□ -0.12
HLA-C-204ENST00000415537 ERC2-IT1O76042 136 aa14.29□□□□□ -0.12
HLA-C-204ENST00000415537 JOSD1Q15040 202 aaPredicted RBP14.29□□□□□ -0.12
HLA-C-204ENST00000415537 Q9BRP9 147 aa14.29□□□□□ -0.12
HLA-C-204ENST00000415537 IGLV9-49A0A0B4J1Y8 123 aa14.26□□□□□ -0.13
HLA-C-204ENST00000415537 EIF4EBP3O60516 100 aaPredicted RBP14.26□□□□□ -0.13
HLA-C-204ENST00000415537 SPINK1P00995 79 aa14.26□□□□□ -0.13
HLA-C-204ENST00000415537 LINC01545Q5VT33 79 aa14.26□□□□□ -0.13
HLA-C-204ENST00000415537 PET117Q6UWS5 81 aa14.26□□□□□ -0.13
HLA-C-204ENST00000415537 CBY1Q9Y3M2 126 aa14.26□□□□□ -0.13
HLA-C-204ENST00000415537 ZNF73O43830 326 aaPredicted RBP14.24□□□□□ -0.13
HLA-C-204ENST00000415537 HINT1P49773 126 aaPredicted RBP14.24□□□□□ -0.13
HLA-C-204ENST00000415537 MOBPQ13875 183 aa14.24□□□□□ -0.13
HLA-C-204ENST00000415537 FP248Q71RG6 208 aaPredicted RBP14.24□□□□□ -0.13
HLA-C-204ENST00000415537 SSBP3-AS1Q7Z2R9 100 aa14.22□□□□□ -0.13
HLA-C-204ENST00000415537 SPANXCQ9NY87 97 aa14.22□□□□□ -0.13
HLA-C-204ENST00000415537 ZNF815PA8K554 130 aa14.21□□□□□ -0.13
HLA-C-204ENST00000415537 TIMM17BO60830 172 aa14.21□□□□□ -0.13
HLA-C-204ENST00000415537 OR13C6PQ8NH95 151 aa14.21□□□□□ -0.13
HLA-C-204ENST00000415537 LINC00308Q8TCZ7 52 aa14.21□□□□□ -0.13
HLA-C-204ENST00000415537 LITAFQ99732 161 aa14.2□□□□□ -0.14
HLA-C-204ENST00000415537 C3orf79P0CE67 100 aa14.18□□□□□ -0.14
HLA-C-204ENST00000415537 KRTDAPP60985 99 aa14.16□□□□□ -0.14
HLA-C-204ENST00000415537 C9orf153Q5TBE3 101 aa14.15□□□□□ -0.14
HLA-C-204ENST00000415537 TTTY13Q9BZ97 58 aa14.14□□□□□ -0.15
HLA-C-204ENST00000415537 C5orf52A6NGY3 159 aa14.13□□□□□ -0.15
HLA-C-204ENST00000415537 RPS29P62273 56 aaKnown RBP14.13□□□□□ -0.15
HLA-C-204ENST00000415537 COA6Q5JTJ3 125 aaKnown RBP14.12□□□□□ -0.15
HLA-C-204ENST00000415537 ST20-AS1Q8NBB2 130 aa14.12□□□□□ -0.15
HLA-C-204ENST00000415537 SPANXDQ9BXN6 97 aa14.12□□□□□ -0.15
HLA-C-204ENST00000415537 LINC00518Q8N0U6 118 aa14.11□□□□□ -0.15
HLA-C-204ENST00000415537 C20orf202A1L168 122 aa14.1□□□□□ -0.15
HLA-C-204ENST00000415537 SCGB1D4Q6XE38 83 aa14.1□□□□□ -0.15
HLA-C-204ENST00000415537 DHRS4-AS1Q9P1J3 65 aa14.09□□□□□ -0.15
HLA-C-204ENST00000415537 Q8N377 158 aa14.08□□□□□ -0.16
HLA-C-204ENST00000415537 MUC17Q685J3 4493 aa14.07□□□□□ -0.16
HLA-C-204ENST00000415537 SLC25A20O43772 301 aa14.07□□□□□ -0.16
HLA-C-204ENST00000415537 KRTAP13-3Q3SY46 172 aa14.07□□□□□ -0.16
HLA-C-204ENST00000415537 SLC25A34Q6PIV7 304 aa14.05□□□□□ -0.16
HLA-C-204ENST00000415537 COPS9Q8WXC6 57 aa14.05□□□□□ -0.16
HLA-C-204ENST00000415537 COX7BP24311 80 aa14.03□□□□□ -0.16
HLA-C-204ENST00000415537 C6orf99Q4VX62 202 aa14.02□□□□□ -0.17
HLA-C-204ENST00000415537 AKR1D1P51857 326 aa14.01□□□□□ -0.17
HLA-C-204ENST00000415537 ELOF1P60002 83 aaKnown RBP14.01□□□□□ -0.17
HLA-C-204ENST00000415537 ANKRD39Q53RE8 183 aa14.01□□□□□ -0.17
HLA-C-204ENST00000415537 ATOH7Q8N100 152 aa14.01□□□□□ -0.17
HLA-C-204ENST00000415537 SPRR1BP22528 89 aa14□□□□□ -0.17
HLA-C-204ENST00000415537 IFITM1P13164 125 aa13.99□□□□□ -0.17
HLA-C-204ENST00000415537 LAMTOR3Q9UHA4 124 aa13.99□□□□□ -0.17
HLA-C-204ENST00000415537 Q6ZVH6 145 aa13.97□□□□□ -0.17
HLA-C-204ENST00000415537 TAL2Q16559 108 aa13.96□□□□□ -0.17
HLA-C-204ENST00000415537 A6NDN8 102 aa13.95□□□□□ -0.18
HLA-C-204ENST00000415537 DEFB105AQ8NG35 78 aa13.94□□□□□ -0.18
HLA-C-204ENST00000415537 TRBV7-6A0A0J9YX20 115 aa13.93□□□□□ -0.18
HLA-C-204ENST00000415537 ASB16-AS1Q495Z4 193 aa13.93□□□□□ -0.18
HLA-C-204ENST00000415537 PCP2Q8IVA1 136 aa13.93□□□□□ -0.18
HLA-C-204ENST00000415537 MUSTN1Q8IVN3 82 aa13.93□□□□□ -0.18
HLA-C-204ENST00000415537 HRCT1Q6UXD1 115 aa13.92□□□□□ -0.18
HLA-C-204ENST00000415537 LIMD2Q9BT23 127 aa13.92□□□□□ -0.18
HLA-C-204ENST00000415537 FAT4Q6V0I7 4981 aa13.91□□□□□ -0.18
HLA-C-204ENST00000415537 A0A1B0GWB2 263 aa13.91□□□□□ -0.18
HLA-C-204ENST00000415537 SEC61BP60468 96 aaKnown RBP13.91□□□□□ -0.18
HLA-C-204ENST00000415537 TEX49A0A1B0GTD5 131 aa13.9□□□□□ -0.18
HLA-C-204ENST00000415537 SNRPEP62304 92 aaKnown RBP13.9□□□□□ -0.18
HLA-C-204ENST00000415537 Q1RN00 199 aa13.89□□□□□ -0.19
HLA-C-204ENST00000415537 LCE2AQ5TA79 106 aaPredicted RBP13.89□□□□□ -0.19
HLA-C-204ENST00000415537 TRAV13-2A0A0B4J235 113 aa13.86□□□□□ -0.19
HLA-C-204ENST00000415537 S100A2P29034 98 aa13.85□□□□□ -0.19
HLA-C-204ENST00000415537 PRO1933Q9H354 126 aa13.85□□□□□ -0.19
HLA-C-204ENST00000415537 A4D1N5 150 aa13.83□□□□□ -0.2
HLA-C-204ENST00000415537 HSBP1L1C9JCN9 74 aa13.82□□□□□ -0.2
HLA-C-204ENST00000415537 HIST3H2BBQ8N257 126 aa13.82□□□□□ -0.2
HLA-C-204ENST00000415537 CD164Q04900 197 aa13.81□□□□□ -0.2
HLA-C-204ENST00000415537 XP32Q5T750 250 aa13.81□□□□□ -0.2
HLA-C-204ENST00000415537 NHP2Q9NX24 153 aaKnown RBP13.81□□□□□ -0.2
HLA-C-204ENST00000415537 SMIM11BQ8TCY0 68 aa13.8□□□□□ -0.2
HLA-C-204ENST00000415537 HIST1H2BLQ99880 126 aa13.8□□□□□ -0.2
HLA-C-204ENST00000415537 IGLV5-48A0A075B6I7 105 aa13.78□□□□□ -0.2
HLA-C-204ENST00000415537 H7C2G1 150 aa13.78□□□□□ -0.2
HLA-C-204ENST00000415537 SMIM29Q86T20 159 aa13.78□□□□□ -0.2
HLA-C-204ENST00000415537 LINC01547P58512 204 aaPredicted RBP13.76□□□□□ -0.21
HLA-C-204ENST00000415537 S100A6P06703 90 aa13.75□□□□□ -0.21
HLA-C-204ENST00000415537 VAMP3Q15836 100 aa13.75□□□□□ -0.21
HLA-C-204ENST00000415537 S100A1P23297 94 aa13.73□□□□□ -0.21
HLA-C-204ENST00000415537 KRTAP4-1Q9BYQ7 146 aa13.73□□□□□ -0.21
HLA-C-204ENST00000415537 C9orf92A6NGG3 77 aa13.7□□□□□ -0.22
HLA-C-204ENST00000415537 Q5XG85 94 aa13.68□□□□□ -0.22
HLA-C-204ENST00000415537 A0A0G2JQZ4 141 aa13.67□□□□□ -0.22
HLA-C-204ENST00000415537 KRTAP9-2Q9BYQ4 174 aa13.67□□□□□ -0.22
HLA-C-204ENST00000415537 F8WEM9 126 aa13.65□□□□□ -0.22
HLA-C-204ENST00000415537 LINC00575Q6W349 94 aa13.65□□□□□ -0.22
HLA-C-204ENST00000415537 SCGB1D1O95968 90 aa13.64□□□□□ -0.23
HLA-C-204ENST00000415537 hADV29S1A0JD25 119 aa13.62□□□□□ -0.23
HLA-C-204ENST00000415537 C1orf195Q5TG92 126 aa13.62□□□□□ -0.23
HLA-C-204ENST00000415537 HIST1H4GQ99525 98 aa13.61□□□□□ -0.23
HLA-C-204ENST00000415537 Q6ZQY7 126 aa13.6□□□□□ -0.23
HLA-C-204ENST00000415537 TCL1BO95988 128 aa13.58□□□□□ -0.24
HLA-C-204ENST00000415537 PCOTHQ58A44 107 aa13.58□□□□□ -0.24
HLA-C-204ENST00000415537 C12orf57Q99622 126 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms