RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 IGKV2-28A0A075B6P5 120 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 LOC107984156A0A0G2JMH3 177 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 M0R378 163 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 BCE1O60756 84 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 IGKV2D-28P01615 120 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 ADAMTSL4-AS1Q5T5F5 129 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 REG3GQ6UW15 175 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 ARL17AQ8IVW1 177 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 DIRC1Q969H9 104 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 MIEN1Q9BRT3 115 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 TTTY13Q9BZ97 58 aa5.84□□□□□ -1.47
HCG27-202ENST00000414008 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.48
HCG27-202ENST00000414008 ZNF861PO60384 105 aa5.83□□□□□ -1.48
HCG27-202ENST00000414008 TIMM17BO60830 172 aa5.83□□□□□ -1.48
HCG27-202ENST00000414008 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
HCG27-202ENST00000414008 PKHD1L1Q86WI1 4243 aa5.82□□□□□ -1.48
HCG27-202ENST00000414008 HSBP1L1C9JCN9 74 aa5.82□□□□□ -1.48
HCG27-202ENST00000414008 NCR3O14931 201 aa5.82□□□□□ -1.48
HCG27-202ENST00000414008 RPL28P46779 137 aaKnown RBP5.82□□□□□ -1.48
HCG27-202ENST00000414008 LITAFQ99732 161 aa5.82□□□□□ -1.48
HCG27-202ENST00000414008 H0Y9J4 135 aa5.81□□□□□ -1.48
HCG27-202ENST00000414008 NPC2P61916 151 aa5.81□□□□□ -1.48
HCG27-202ENST00000414008 SOSTDC1Q6X4U4 206 aa5.81□□□□□ -1.48
HCG27-202ENST00000414008 SCGB1D4Q6XE38 83 aa5.81□□□□□ -1.48
HCG27-202ENST00000414008 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
HCG27-202ENST00000414008 TMEM126AQ9H061 195 aa5.81□□□□□ -1.48
HCG27-202ENST00000414008 TMEM238C9JI98 176 aa5.8□□□□□ -1.48
HCG27-202ENST00000414008 NDUFC2O95298 119 aa5.8□□□□□ -1.48
HCG27-202ENST00000414008 UBE2AP49459 152 aa5.8□□□□□ -1.48
HCG27-202ENST00000414008 PCP2Q8IVA1 136 aa5.8□□□□□ -1.48
HCG27-202ENST00000414008 LINC00308Q8TCZ7 52 aa5.8□□□□□ -1.48
HCG27-202ENST00000414008 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
HCG27-202ENST00000414008 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
HCG27-202ENST00000414008 MT1HL1P0DM35 61 aa5.79□□□□□ -1.48
HCG27-202ENST00000414008 SPANXB1Q9NS25 103 aaPredicted RBP5.79□□□□□ -1.48
HCG27-202ENST00000414008 TRBV10-3A0A0K0K1G6 114 aa5.78□□□□□ -1.48
HCG27-202ENST00000414008 S100A12P80511 92 aa5.78□□□□□ -1.48
HCG27-202ENST00000414008 FAM19A1Q7Z5A9 133 aa5.78□□□□□ -1.48
HCG27-202ENST00000414008 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
HCG27-202ENST00000414008 KCNQ1DNQ9H478 68 aa5.78□□□□□ -1.48
HCG27-202ENST00000414008 DDTP30046 118 aa5.77□□□□□ -1.49
HCG27-202ENST00000414008 PRLHP81277 87 aa5.77□□□□□ -1.49
HCG27-202ENST00000414008 S100A7L2Q5SY68 101 aa5.77□□□□□ -1.49
HCG27-202ENST00000414008 Q6ZVH6 145 aa5.77□□□□□ -1.49
HCG27-202ENST00000414008 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
HCG27-202ENST00000414008 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
HCG27-202ENST00000414008 SPANXCQ9NY87 97 aa5.77□□□□□ -1.49
HCG27-202ENST00000414008 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
HCG27-202ENST00000414008 COPS9Q8WXC6 57 aa5.76□□□□□ -1.49
HCG27-202ENST00000414008 IGLV6-57P01721 117 aa5.75□□□□□ -1.49
HCG27-202ENST00000414008 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
HCG27-202ENST00000414008 IFITM1P13164 125 aa5.75□□□□□ -1.49
HCG27-202ENST00000414008 SPRR1AP35321 89 aa5.75□□□□□ -1.49
HCG27-202ENST00000414008 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
HCG27-202ENST00000414008 LINC00337Q8N6G1 96 aa5.75□□□□□ -1.49
HCG27-202ENST00000414008 ETDCA0A1B0GVM5 59 aa5.74□□□□□ -1.49
HCG27-202ENST00000414008 MUSTN1Q8IVN3 82 aa5.74□□□□□ -1.49
HCG27-202ENST00000414008 LINC00518Q8N0U6 118 aa5.74□□□□□ -1.49
HCG27-202ENST00000414008 OR13C6PQ8NH95 151 aa5.74□□□□□ -1.49
HCG27-202ENST00000414008 PPDPFQ9H3Y8 114 aa5.74□□□□□ -1.49
HCG27-202ENST00000414008 CBY1Q9Y3M2 126 aa5.74□□□□□ -1.49
HCG27-202ENST00000414008 TRAV23DV6A0A075B6W5 121 aa5.73□□□□□ -1.49
HCG27-202ENST00000414008 KRTAP4-16G5E9R7 235 aaPredicted RBP5.73□□□□□ -1.49
HCG27-202ENST00000414008 COX8AP10176 69 aa5.73□□□□□ -1.49
HCG27-202ENST00000414008 HIGD2AQ9BW72 106 aa5.73□□□□□ -1.49
HCG27-202ENST00000414008 HERC1Q15751 4861 aa5.73□□□□□ -1.49
HCG27-202ENST00000414008 MT3P25713 68 aa5.72□□□□□ -1.49
HCG27-202ENST00000414008 SPATA45Q537H7 98 aa5.72□□□□□ -1.49
HCG27-202ENST00000414008 VAMP8Q9BV40 100 aa5.72□□□□□ -1.49
HCG27-202ENST00000414008 DLEU1O43261 78 aa5.71□□□□□ -1.5
HCG27-202ENST00000414008 RPL13AP40429 203 aaKnown RBP5.71□□□□□ -1.5
HCG27-202ENST00000414008 ZNF73O43830 326 aaPredicted RBP5.7□□□□□ -1.5
HCG27-202ENST00000414008 CRYGAP11844 174 aa5.7□□□□□ -1.5
HCG27-202ENST00000414008 HINT1P49773 126 aaPredicted RBP5.7□□□□□ -1.5
HCG27-202ENST00000414008 SMCR5Q8TEV8 140 aa5.7□□□□□ -1.5
HCG27-202ENST00000414008 C14orf144Q96I85 54 aa5.7□□□□□ -1.5
HCG27-202ENST00000414008 ANAPC11Q9NYG5 84 aa5.7□□□□□ -1.5
HCG27-202ENST00000414008 TNXBP22105 4242 aa5.7□□□□□ -1.5
HCG27-202ENST00000414008 A6NDN8 102 aa5.69□□□□□ -1.5
HCG27-202ENST00000414008 PYY3Q5JQD4 70 aa5.69□□□□□ -1.5
HCG27-202ENST00000414008 Q6ZRX8 168 aa5.69□□□□□ -1.5
HCG27-202ENST00000414008 A0A087X002 238 aa5.68□□□□□ -1.5
HCG27-202ENST00000414008 FAM229BQ4G0N7 80 aa5.68□□□□□ -1.5
HCG27-202ENST00000414008 SPRR4Q96PI1 79 aa5.68□□□□□ -1.5
HCG27-202ENST00000414008 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
HCG27-202ENST00000414008 ZNF706Q9Y5V0 76 aaPredicted RBP5.68□□□□□ -1.5
HCG27-202ENST00000414008 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
HCG27-202ENST00000414008 SLC25A34Q6PIV7 304 aa5.67□□□□□ -1.5
HCG27-202ENST00000414008 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
HCG27-202ENST00000414008 Q9BRP9 147 aa5.67□□□□□ -1.5
HCG27-202ENST00000414008 ERC2-IT1O76042 136 aa5.66□□□□□ -1.5
HCG27-202ENST00000414008 C6orf99Q4VX62 202 aa5.66□□□□□ -1.5
HCG27-202ENST00000414008 HIGD1BQ9P298 99 aa5.66□□□□□ -1.5
HCG27-202ENST00000414008 COX7BP24311 80 aa5.65□□□□□ -1.5
HCG27-202ENST00000414008 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
HCG27-202ENST00000414008 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
HCG27-202ENST00000414008 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
HCG27-202ENST00000414008 TRBV7-6A0A0J9YX20 115 aa5.63□□□□□ -1.51
HCG27-202ENST00000414008 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms