RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	UBE2A	P49459	152 aa		8.06	□□□□□ -1.12
SF1-206	ENST00000413725	HNRNPA3	P51991	378 aa	Known RBP	8.06	□□□□□ -1.12
SF1-206	ENST00000413725	SPINK6	Q6UWN8	80 aa		8.06	□□□□□ -1.12
SF1-206	ENST00000413725	RPL28	P46779	137 aa	Known RBP	8.05	□□□□□ -1.12
SF1-206	ENST00000413725	TAL2	Q16559	108 aa		8.05	□□□□□ -1.12
SF1-206	ENST00000413725	FAM19A1	Q7Z5A9	133 aa		8.05	□□□□□ -1.12
SF1-206	ENST00000413725	ABCA13	Q86UQ4	5058 aa		8.05	□□□□□ -1.12
SF1-206	ENST00000413725	PCLO	Q9Y6V0	5065 aa		8.04	□□□□□ -1.12
SF1-206	ENST00000413725	TRAV23DV6	A0A075B6W5	121 aa		8.04	□□□□□ -1.12
SF1-206	ENST00000413725	TRAV13-2	A0A0B4J235	113 aa		8.04	□□□□□ -1.12
SF1-206	ENST00000413725		A4D1N5	150 aa		8.04	□□□□□ -1.12
SF1-206	ENST00000413725	ZNF861P	O60384	105 aa		8.04	□□□□□ -1.12
SF1-206	ENST00000413725	LINC00337	Q8N6G1	96 aa		8.04	□□□□□ -1.12
SF1-206	ENST00000413725	DIRC1	Q969H9	104 aa		8.04	□□□□□ -1.12
SF1-206	ENST00000413725	ETDC	A0A1B0GVM5	59 aa		8.03	□□□□□ -1.12
SF1-206	ENST00000413725		A6NDN8	102 aa		8.03	□□□□□ -1.12
SF1-206	ENST00000413725	SPRR1A	P35321	89 aa		8.03	□□□□□ -1.12
SF1-206	ENST00000413725	CEND1	Q8N111	149 aa		8.02	□□□□□ -1.13
SF1-206	ENST00000413725	TMEM238L	A0A1B0GVL6	79 aa		8.01	□□□□□ -1.13
SF1-206	ENST00000413725	LOR	P23490	312 aa	Predicted RBP	8.01	□□□□□ -1.13
SF1-206	ENST00000413725	PRLH	P81277	87 aa		8.01	□□□□□ -1.13
SF1-206	ENST00000413725	HSD52	Q0P140	79 aa		8.01	□□□□□ -1.13
SF1-206	ENST00000413725	C12orf57	Q99622	126 aa		8.01	□□□□□ -1.13
SF1-206	ENST00000413725	PRO1933	Q9H354	126 aa		8.01	□□□□□ -1.13
SF1-206	ENST00000413725		H0Y9J4	135 aa		8	□□□□□ -1.13
SF1-206	ENST00000413725	ZNF73	O43830	326 aa	Predicted RBP	8	□□□□□ -1.13
SF1-206	ENST00000413725	HINT1	P49773	126 aa	Predicted RBP	8	□□□□□ -1.13
SF1-206	ENST00000413725	KRTAP13-1	Q8IUC0	172 aa		8	□□□□□ -1.13
SF1-206	ENST00000413725	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	7.99	□□□□□ -1.13
SF1-206	ENST00000413725	TSTD3	H0UI37	97 aa		7.98	□□□□□ -1.13
SF1-206	ENST00000413725		B5MCH6	92 aa		7.97	□□□□□ -1.13
SF1-206	ENST00000413725		Q6ZRX8	168 aa		7.97	□□□□□ -1.13
SF1-206	ENST00000413725	RAB37	Q96AX2	223 aa		7.97	□□□□□ -1.13
SF1-206	ENST00000413725	HIGD2A	Q9BW72	106 aa		7.97	□□□□□ -1.13
SF1-206	ENST00000413725		A0A0B4J2C4	111 aa		7.96	□□□□□ -1.14
SF1-206	ENST00000413725	RPL13A	P40429	203 aa	Known RBP	7.96	□□□□□ -1.14
SF1-206	ENST00000413725	C6orf99	Q4VX62	202 aa		7.96	□□□□□ -1.14
SF1-206	ENST00000413725	CFC1B	P0CG36	223 aa		7.95	□□□□□ -1.14
SF1-206	ENST00000413725	CFC1	P0CG37	223 aa		7.95	□□□□□ -1.14
SF1-206	ENST00000413725	FXYD2	P54710	66 aa		7.95	□□□□□ -1.14
SF1-206	ENST00000413725	OXT	P01178	125 aa		7.94	□□□□□ -1.14
SF1-206	ENST00000413725	SMIM11B	Q8TCY0	68 aa		7.94	□□□□□ -1.14
SF1-206	ENST00000413725	MYCBP2	O75592	4640 aa		7.93	□□□□□ -1.14
SF1-206	ENST00000413725	TRBV7-6	A0A0J9YX20	115 aa		7.93	□□□□□ -1.14
SF1-206	ENST00000413725	GHRH	P01286	108 aa		7.93	□□□□□ -1.14
SF1-206	ENST00000413725	COX7B	P24311	80 aa		7.93	□□□□□ -1.14
SF1-206	ENST00000413725		A0A1B0GWB2	263 aa		7.92	□□□□□ -1.14
SF1-206	ENST00000413725	ELOF1	P60002	83 aa	Known RBP	7.92	□□□□□ -1.14
SF1-206	ENST00000413725	VAMP3	Q15836	100 aa		7.92	□□□□□ -1.14
SF1-206	ENST00000413725	SMCR5	Q8TEV8	140 aa		7.92	□□□□□ -1.14
SF1-206	ENST00000413725	NHP2	Q9NX24	153 aa	Known RBP	7.92	□□□□□ -1.14
SF1-206	ENST00000413725	PRO1854	Q9UHT4	67 aa		7.92	□□□□□ -1.14
SF1-206	ENST00000413725	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.92	□□□□□ -1.14
SF1-206	ENST00000413725	KRTAP29-1	A8MX34	341 aa	Predicted RBP	7.91	□□□□□ -1.14
SF1-206	ENST00000413725		H7C2G1	150 aa		7.91	□□□□□ -1.14
SF1-206	ENST00000413725		Q9BRP9	147 aa		7.91	□□□□□ -1.14
SF1-206	ENST00000413725	DHRS4-AS1	Q9P1J3	65 aa		7.91	□□□□□ -1.14
SF1-206	ENST00000413725	FAT3	Q8TDW7	4589 aa		7.9	□□□□□ -1.14
SF1-206	ENST00000413725		M0R143	59 aa		7.9	□□□□□ -1.14
SF1-206	ENST00000413725	CTAG1A	P78358	180 aa		7.9	□□□□□ -1.14
SF1-206	ENST00000413725		Q1RN00	199 aa		7.9	□□□□□ -1.14
SF1-206	ENST00000413725	BVES-AS1	Q5T3Y7	98 aa		7.9	□□□□□ -1.14
SF1-206	ENST00000413725	LINC01600	Q96MT4	127 aa		7.9	□□□□□ -1.14
SF1-206	ENST00000413725	LRP1	Q07954	4544 aa	Known RBP	7.9	□□□□□ -1.15
SF1-206	ENST00000413725	DMBT1	Q9UGM3	2413 aa	Predicted RBP	7.89	□□□□□ -1.15
SF1-206	ENST00000413725	KRTAP1-4	P0C5Y4	121 aa		7.89	□□□□□ -1.15
SF1-206	ENST00000413725	ERC2-IT1	O76042	136 aa		7.87	□□□□□ -1.15
SF1-206	ENST00000413725	SPRR4	Q96PI1	79 aa		7.87	□□□□□ -1.15
SF1-206	ENST00000413725		K7ERJ3	54 aa		7.86	□□□□□ -1.15
SF1-206	ENST00000413725	SLC25A20	O43772	301 aa		7.86	□□□□□ -1.15
SF1-206	ENST00000413725	FAM229B	Q4G0N7	80 aa		7.86	□□□□□ -1.15
SF1-206	ENST00000413725	CRYGA	P11844	174 aa		7.85	□□□□□ -1.15
SF1-206	ENST00000413725	PRR26	Q8N8Z3	221 aa		7.84	□□□□□ -1.15
SF1-206	ENST00000413725	GAGE2A	Q6NT46	116 aa		7.83	□□□□□ -1.16
SF1-206	ENST00000413725	ANAPC11	Q9NYG5	84 aa		7.83	□□□□□ -1.16
SF1-206	ENST00000413725		H0YGX0	51 aa		7.82	□□□□□ -1.16
SF1-206	ENST00000413725	MT1HL1	P0DM35	61 aa		7.82	□□□□□ -1.16
SF1-206	ENST00000413725	PSMB2	P49721	201 aa		7.82	□□□□□ -1.16
SF1-206	ENST00000413725	LINC00483	Q53H64	154 aa		7.82	□□□□□ -1.16
SF1-206	ENST00000413725	LINC00575	Q6W349	94 aa		7.82	□□□□□ -1.16
SF1-206	ENST00000413725		A0A087X002	238 aa		7.81	□□□□□ -1.16
SF1-206	ENST00000413725	hADV29S1	A0JD25	119 aa		7.81	□□□□□ -1.16
SF1-206	ENST00000413725	SNCG	O76070	127 aa		7.81	□□□□□ -1.16
SF1-206	ENST00000413725	KRTAP10-8	P60410	259 aa		7.81	□□□□□ -1.16
SF1-206	ENST00000413725	ST20-AS1	Q8NBB2	130 aa		7.81	□□□□□ -1.16
SF1-206	ENST00000413725	TRIAP1	O43715	76 aa		7.8	□□□□□ -1.16
SF1-206	ENST00000413725	TSPAN13	O95857	204 aa		7.8	□□□□□ -1.16
SF1-206	ENST00000413725	COX6C	P09669	75 aa		7.8	□□□□□ -1.16
SF1-206	ENST00000413725	BATF	Q16520	125 aa		7.79	□□□□□ -1.16
SF1-206	ENST00000413725	TYMSOS	Q8TAI1	123 aa		7.79	□□□□□ -1.16
SF1-206	ENST00000413725	TNXB	P22105	4242 aa		7.79	□□□□□ -1.16
SF1-206	ENST00000413725	DEFB105A	Q8NG35	78 aa		7.78	□□□□□ -1.16
SF1-206	ENST00000413725	TEX49	A0A1B0GTD5	131 aa		7.77	□□□□□ -1.17
SF1-206	ENST00000413725	SPRR1B	P22528	89 aa		7.77	□□□□□ -1.17
SF1-206	ENST00000413725	IGLV5-48	A0A075B6I7	105 aa		7.76	□□□□□ -1.17
SF1-206	ENST00000413725	KRTAP13-2	Q52LG2	175 aa		7.76	□□□□□ -1.17
SF1-206	ENST00000413725	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.76	□□□□□ -1.17
SF1-206	ENST00000413725		Q6ZQY7	126 aa		7.76	□□□□□ -1.17
SF1-206	ENST00000413725		A0A1B0GX51	115 aa		7.75	□□□□□ -1.17
SF1-206	ENST00000413725	C3orf22	Q8N5N4	141 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms