RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ZNF861PO60384 105 aa4.96□□□□□ -1.62
PTPN3-203ENST00000412145 C9orf129Q5T035 196 aaKnown RBP4.95□□□□□ -1.62
PTPN3-203ENST00000412145 ANKRD17O75179 2603 aaKnown RBP4.95□□□□□ -1.62
PTPN3-203ENST00000412145 SETD2Q9BYW2 2564 aaPredicted RBP4.95□□□□□ -1.62
PTPN3-203ENST00000412145 PHF5AQ7RTV0 110 aaKnown RBP4.95□□□□□ -1.62
PTPN3-203ENST00000412145 J3QL48 77 aa4.94□□□□□ -1.62
PTPN3-203ENST00000412145 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
PTPN3-203ENST00000412145 EIF4EBP3O60516 100 aaPredicted RBP4.94□□□□□ -1.62
PTPN3-203ENST00000412145 C9orf163Q8N9P6 203 aa4.93□□□□□ -1.62
PTPN3-203ENST00000412145 Q8NAQ8 132 aa4.93□□□□□ -1.62
PTPN3-203ENST00000412145 CSNK1G2-AS1Q8NCQ2 148 aa4.93□□□□□ -1.62
PTPN3-203ENST00000412145 WWC2-AS2Q96NR7 200 aa4.93□□□□□ -1.62
PTPN3-203ENST00000412145 Q75L30 129 aa4.93□□□□□ -1.62
PTPN3-203ENST00000412145 HRES1P13985 223 aa4.92□□□□□ -1.62
PTPN3-203ENST00000412145 LINC00336Q6ZUF6 198 aa4.92□□□□□ -1.62
PTPN3-203ENST00000412145 PRR34Q9NV39 138 aa4.92□□□□□ -1.62
PTPN3-203ENST00000412145 LINC00588Q9Y4M8 146 aa4.92□□□□□ -1.62
PTPN3-203ENST00000412145 TNP2Q05952 138 aa4.92□□□□□ -1.62
PTPN3-203ENST00000412145 ASB16-AS1Q495Z4 193 aa4.91□□□□□ -1.62
PTPN3-203ENST00000412145 POLQO75417 2590 aa4.91□□□□□ -1.62
PTPN3-203ENST00000412145 IGLV5-37A0A075B6J1 123 aa4.9□□□□□ -1.62
PTPN3-203ENST00000412145 CHTF8P0CG12 524 aa4.9□□□□□ -1.62
PTPN3-203ENST00000412145 KRTAP24-1Q3LI83 254 aa4.9□□□□□ -1.62
PTPN3-203ENST00000412145 USP9YO00507 2555 aaPredicted RBP4.9□□□□□ -1.62
PTPN3-203ENST00000412145 FLG2Q5D862 2391 aaPredicted RBP4.89□□□□□ -1.63
PTPN3-203ENST00000412145 CNBPP62633 177 aaKnown RBP4.88□□□□□ -1.63
PTPN3-203ENST00000412145 OBSCN-AS1Q96MR7 158 aa4.88□□□□□ -1.63
PTPN3-203ENST00000412145 ANKRD11Q6UB99 2663 aaPredicted RBP4.88□□□□□ -1.63
PTPN3-203ENST00000412145 CHD8Q9HCK8 2581 aa4.88□□□□□ -1.63
PTPN3-203ENST00000412145 MTORP42345 2549 aa4.87□□□□□ -1.63
PTPN3-203ENST00000412145 DSCR10P59022 87 aa4.87□□□□□ -1.63
PTPN3-203ENST00000412145 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
PTPN3-203ENST00000412145 IGLV5-48A0A075B6I7 105 aa4.87□□□□□ -1.63
PTPN3-203ENST00000412145 IGLV7-46A0A075B6I9 117 aa4.86□□□□□ -1.63
PTPN3-203ENST00000412145 COL4A2P08572 1712 aa4.85□□□□□ -1.63
PTPN3-203ENST00000412145 A0A1B0GU33 70 aa4.85□□□□□ -1.63
PTPN3-203ENST00000412145 Q8N377 158 aa4.85□□□□□ -1.63
PTPN3-203ENST00000412145 SPRR4Q96PI1 79 aa4.85□□□□□ -1.63
PTPN3-203ENST00000412145 IGLV7-43P04211 117 aa4.84□□□□□ -1.63
PTPN3-203ENST00000412145 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
PTPN3-203ENST00000412145 LINC00612Q8N6U2 182 aa4.84□□□□□ -1.63
PTPN3-203ENST00000412145 SPTBN4Q9H254 2564 aa4.82□□□□□ -1.64
PTPN3-203ENST00000412145 OCR1Q9BZK8 76 aa4.82□□□□□ -1.64
PTPN3-203ENST00000412145 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
PTPN3-203ENST00000412145 PSORS1C2Q9UIG4 136 aa4.81□□□□□ -1.64
PTPN3-203ENST00000412145 FAM168BA1KXE4 195 aa4.79□□□□□ -1.64
PTPN3-203ENST00000412145 A0A087WTM6 91 aa4.79□□□□□ -1.64
PTPN3-203ENST00000412145 CSAG1Q6PB30 78 aa4.78□□□□□ -1.64
PTPN3-203ENST00000412145 Q6ZSA8 131 aa4.77□□□□□ -1.65
PTPN3-203ENST00000412145 A0A0D9SG42 100 aa4.77□□□□□ -1.65
PTPN3-203ENST00000412145 GOLGB1Q14789 3259 aaKnown RBP4.77□□□□□ -1.65
PTPN3-203ENST00000412145 C19orf73Q9NVV2 129 aa4.77□□□□□ -1.65
PTPN3-203ENST00000412145 CR1P17927 2039 aa4.77□□□□□ -1.65
PTPN3-203ENST00000412145 ZNF575Q86XF7 245 aa4.75□□□□□ -1.65
PTPN3-203ENST00000412145 A0A1W2PNM2 257 aa4.74□□□□□ -1.65
PTPN3-203ENST00000412145 CEP295Q9C0D2 2601 aa4.74□□□□□ -1.65
PTPN3-203ENST00000412145 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
PTPN3-203ENST00000412145 H3BS24 57 aa4.73□□□□□ -1.65
PTPN3-203ENST00000412145 Q8N1X5 172 aa4.72□□□□□ -1.65
PTPN3-203ENST00000412145 S4R3F8 94 aa4.71□□□□□ -1.65
PTPN3-203ENST00000412145 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.71□□□□□ -1.65
PTPN3-203ENST00000412145 Q8N9P0 234 aaPredicted RBP4.71□□□□□ -1.66
PTPN3-203ENST00000412145 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
PTPN3-203ENST00000412145 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
PTPN3-203ENST00000412145 ROMO1P60602 79 aa4.7□□□□□ -1.66
PTPN3-203ENST00000412145 CENPFP49454 3210 aa4.68□□□□□ -1.66
PTPN3-203ENST00000412145 SPINK7P58062 85 aa4.68□□□□□ -1.66
PTPN3-203ENST00000412145 K7EIL1 84 aa4.68□□□□□ -1.66
PTPN3-203ENST00000412145 UTRNP46939 3433 aa4.68□□□□□ -1.66
PTPN3-203ENST00000412145 RPL37P61927 97 aaKnown RBP4.68□□□□□ -1.66
PTPN3-203ENST00000412145 GIG44P09565 113 aaPredicted RBP4.67□□□□□ -1.66
PTPN3-203ENST00000412145 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
PTPN3-203ENST00000412145 FASNP49327 2511 aaKnown RBP4.66□□□□□ -1.66
PTPN3-203ENST00000412145 R4GN34 69 aa4.66□□□□□ -1.66
PTPN3-203ENST00000412145 SPRR1BP22528 89 aa4.65□□□□□ -1.66
PTPN3-203ENST00000412145 USP24Q9UPU5 2620 aa4.65□□□□□ -1.67
PTPN3-203ENST00000412145 KRTAP10-11P60412 298 aa4.65□□□□□ -1.67
PTPN3-203ENST00000412145 A0A087X002 238 aa4.64□□□□□ -1.67
PTPN3-203ENST00000412145 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
PTPN3-203ENST00000412145 Q5VV11 94 aa4.64□□□□□ -1.67
PTPN3-203ENST00000412145 PRRC2CQ9Y520 2896 aaKnown RBP4.63□□□□□ -1.67
PTPN3-203ENST00000412145 A0A1W2PNN7 141 aa4.63□□□□□ -1.67
PTPN3-203ENST00000412145 KRTAP10-3P60369 221 aa4.62□□□□□ -1.67
PTPN3-203ENST00000412145 Q5XG85 94 aa4.62□□□□□ -1.67
PTPN3-203ENST00000412145 EPG5Q9HCE0 2579 aa4.62□□□□□ -1.67
PTPN3-203ENST00000412145 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
PTPN3-203ENST00000412145 M0R2T5 61 aa4.61□□□□□ -1.67
PTPN3-203ENST00000412145 PLAC8Q9NZF1 115 aa4.61□□□□□ -1.67
PTPN3-203ENST00000412145 SPRR1AP35321 89 aa4.61□□□□□ -1.67
PTPN3-203ENST00000412145 SMR3BP02814 79 aaPredicted RBP4.6□□□□□ -1.67
PTPN3-203ENST00000412145 FP248Q71RG6 208 aaPredicted RBP4.6□□□□□ -1.67
PTPN3-203ENST00000412145 Q5W150 140 aa4.59□□□□□ -1.67
PTPN3-203ENST00000412145 A0A096LNT2 108 aa4.58□□□□□ -1.68
PTPN3-203ENST00000412145 H1FX-AS1Q4G0G2 97 aa4.58□□□□□ -1.68
PTPN3-203ENST00000412145 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
PTPN3-203ENST00000412145 KRTAP1-3Q8IUG1 177 aa4.57□□□□□ -1.68
PTPN3-203ENST00000412145 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
PTPN3-203ENST00000412145 Q6ZR54 194 aa4.56□□□□□ -1.68
PTPN3-203ENST00000412145 ANAPC11Q9NYG5 84 aa4.54□□□□□ -1.68
PTPN3-203ENST00000412145 MGAM2Q2M2H8 2515 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms