RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 BPTFQ12830 3046 aa2.95□□□□□ -1.94
PTPN13-202ENST00000411767 C10orf142B7Z368 130 aa2.94□□□□□ -1.94
PTPN13-202ENST00000411767 SPRR4Q96PI1 79 aa2.94□□□□□ -1.94
PTPN13-202ENST00000411767 GAS8-AS1O95177 125 aa2.94□□□□□ -1.94
PTPN13-202ENST00000411767 GVINP1Q7Z2Y8 2422 aa2.94□□□□□ -1.94
PTPN13-202ENST00000411767 OTOGLQ3ZCN5 2332 aa2.94□□□□□ -1.94
PTPN13-202ENST00000411767 KLK9Q2XQG4 91 aa2.93□□□□□ -1.94
PTPN13-202ENST00000411767 HIVEP2P31629 2446 aa2.93□□□□□ -1.94
PTPN13-202ENST00000411767 RAI1Q7Z5J4 1906 aaPredicted RBP2.93□□□□□ -1.94
PTPN13-202ENST00000411767 ADAMTS9Q9P2N4 1935 aa2.93□□□□□ -1.94
PTPN13-202ENST00000411767 KRTAP25-1Q3LHN0 102 aa2.93□□□□□ -1.94
PTPN13-202ENST00000411767 LRP4O75096 1905 aa2.92□□□□□ -1.94
PTPN13-202ENST00000411767 BRCA2P51587 3418 aa2.92□□□□□ -1.94
PTPN13-202ENST00000411767 ALPK3Q96L96 1907 aa2.92□□□□□ -1.94
PTPN13-202ENST00000411767 Q6ZPA2 131 aa2.92□□□□□ -1.94
PTPN13-202ENST00000411767 Q8NDZ9 215 aa2.91□□□□□ -1.94
PTPN13-202ENST00000411767 Q5VV11 94 aa2.91□□□□□ -1.94
PTPN13-202ENST00000411767 URB1-AS1Q96HZ7 61 aa2.91□□□□□ -1.94
PTPN13-202ENST00000411767 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.94
PTPN13-202ENST00000411767 TNP1P09430 55 aa2.9□□□□□ -1.95
PTPN13-202ENST00000411767 KIF26AQ9ULI4 1882 aaPredicted RBP2.9□□□□□ -1.95
PTPN13-202ENST00000411767 KRTAP24-1Q3LI83 254 aa2.9□□□□□ -1.95
PTPN13-202ENST00000411767 Q5VSD8 79 aa2.88□□□□□ -1.95
PTPN13-202ENST00000411767 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
PTPN13-202ENST00000411767 A0A096LNJ9 63 aa2.88□□□□□ -1.95
PTPN13-202ENST00000411767 U3KQA8 63 aa2.88□□□□□ -1.95
PTPN13-202ENST00000411767 COL5A1P20908 1838 aaPredicted RBP2.88□□□□□ -1.95
PTPN13-202ENST00000411767 KIAA1549LQ6ZVL6 1849 aa2.88□□□□□ -1.95
PTPN13-202ENST00000411767 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
PTPN13-202ENST00000411767 LINC00612Q8N6U2 182 aa2.88□□□□□ -1.95
PTPN13-202ENST00000411767 A0A0G2JQZ4 141 aa2.87□□□□□ -1.95
PTPN13-202ENST00000411767 A0A087WTM6 91 aa2.87□□□□□ -1.95
PTPN13-202ENST00000411767 A0A087X002 238 aa2.87□□□□□ -1.95
PTPN13-202ENST00000411767 LINC00310P59036 64 aa2.87□□□□□ -1.95
PTPN13-202ENST00000411767 NAV3Q8IVL0 2385 aa2.87□□□□□ -1.95
PTPN13-202ENST00000411767 CREBBPQ92793 2442 aa2.87□□□□□ -1.95
PTPN13-202ENST00000411767 FAM208BQ5VWN6 2430 aa2.86□□□□□ -1.95
PTPN13-202ENST00000411767 F8P00451 2351 aa2.86□□□□□ -1.95
PTPN13-202ENST00000411767 MUC22E2RYF6 1773 aaPredicted RBP2.86□□□□□ -1.95
PTPN13-202ENST00000411767 OXTP01178 125 aa2.86□□□□□ -1.95
PTPN13-202ENST00000411767 TRANK1O15050 2925 aa2.86□□□□□ -1.95
PTPN13-202ENST00000411767 A0A1W2PNU3 283 aaPredicted RBP2.85□□□□□ -1.95
PTPN13-202ENST00000411767 CNBPP62633 177 aaKnown RBP2.85□□□□□ -1.95
PTPN13-202ENST00000411767 LAMA2P24043 3122 aaKnown RBP2.85□□□□□ -1.95
PTPN13-202ENST00000411767 ROS1P08922 2347 aa2.85□□□□□ -1.95
PTPN13-202ENST00000411767 Q5W150 140 aa2.85□□□□□ -1.95
PTPN13-202ENST00000411767 CHD7Q9P2D1 2997 aa2.84□□□□□ -1.95
PTPN13-202ENST00000411767 A0A1W2PPR1 153 aa2.84□□□□□ -1.95
PTPN13-202ENST00000411767 SMR3BP02814 79 aaPredicted RBP2.84□□□□□ -1.95
PTPN13-202ENST00000411767 SPRR1BP22528 89 aa2.84□□□□□ -1.95
PTPN13-202ENST00000411767 MKI67P46013 3256 aaKnown RBP2.84□□□□□ -1.95
PTPN13-202ENST00000411767 ADAMTS20P59510 1910 aa2.84□□□□□ -1.95
PTPN13-202ENST00000411767 FLG2Q5D862 2391 aaPredicted RBP2.84□□□□□ -1.95
PTPN13-202ENST00000411767 Q5XG85 94 aa2.83□□□□□ -1.96
PTPN13-202ENST00000411767 CHD9Q3L8U1 2897 aa2.83□□□□□ -1.96
PTPN13-202ENST00000411767 COL4A3Q01955 1670 aa2.83□□□□□ -1.96
PTPN13-202ENST00000411767 GPR179Q6PRD1 2367 aa2.82□□□□□ -1.96
PTPN13-202ENST00000411767 PANO1I0J062 215 aa2.82□□□□□ -1.96
PTPN13-202ENST00000411767 ABCA2Q9BZC7 2435 aa2.81□□□□□ -1.96
PTPN13-202ENST00000411767 WISP2O76076 250 aa2.81□□□□□ -1.96
PTPN13-202ENST00000411767 CPAMD8Q8IZJ3 1885 aa2.8□□□□□ -1.96
PTPN13-202ENST00000411767 SPG11Q96JI7 2443 aa2.8□□□□□ -1.96
PTPN13-202ENST00000411767 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
PTPN13-202ENST00000411767 COL4A2P08572 1712 aa2.79□□□□□ -1.96
PTPN13-202ENST00000411767 DOPEY1Q5JWR5 2465 aa2.79□□□□□ -1.96
PTPN13-202ENST00000411767 TTC28Q96AY4 2481 aa2.79□□□□□ -1.96
PTPN13-202ENST00000411767 LAMA3Q16787 3333 aa2.78□□□□□ -1.96
PTPN13-202ENST00000411767 C5orf42Q9H799 3197 aa2.78□□□□□ -1.96
PTPN13-202ENST00000411767 REV3LO60673 3130 aa2.77□□□□□ -1.97
PTPN13-202ENST00000411767 A8MUU9 505 aa2.77□□□□□ -1.97
PTPN13-202ENST00000411767 MYO9AB2RTY4 2548 aa2.77□□□□□ -1.97
PTPN13-202ENST00000411767 SONP18583 2426 aaKnown RBP2.77□□□□□ -1.97
PTPN13-202ENST00000411767 RANBP2P49792 3224 aaKnown RBP2.77□□□□□ -1.97
PTPN13-202ENST00000411767 SMR3AQ99954 134 aa2.76□□□□□ -1.97
PTPN13-202ENST00000411767 CDH23Q9H251 3354 aa2.76□□□□□ -1.97
PTPN13-202ENST00000411767 A6NN06 94 aa2.75□□□□□ -1.97
PTPN13-202ENST00000411767 CRIP3Q6Q6R5 217 aa2.75□□□□□ -1.97
PTPN13-202ENST00000411767 CASC10Q5T4H9 136 aa2.74□□□□□ -1.97
PTPN13-202ENST00000411767 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
PTPN13-202ENST00000411767 NOTCH2NLQ7Z3S9 236 aa2.73□□□□□ -1.97
PTPN13-202ENST00000411767 TRIOO75962 3097 aa2.72□□□□□ -1.97
PTPN13-202ENST00000411767 GIG44P09565 113 aaPredicted RBP2.71□□□□□ -1.98
PTPN13-202ENST00000411767 UNC80Q8N2C7 3258 aa2.71□□□□□ -1.98
PTPN13-202ENST00000411767 CR1P17927 2039 aa2.71□□□□□ -1.98
PTPN13-202ENST00000411767 SZT2Q5T011 3432 aa2.71□□□□□ -1.98
PTPN13-202ENST00000411767 PLAC8Q9NZF1 115 aa2.7□□□□□ -1.98
PTPN13-202ENST00000411767 CCDC168Q8NDH2 2452 aa2.7□□□□□ -1.98
PTPN13-202ENST00000411767 HIVEP3Q5T1R4 2406 aa2.7□□□□□ -1.98
PTPN13-202ENST00000411767 A0A096LNT2 108 aa2.7□□□□□ -1.98
PTPN13-202ENST00000411767 COL27A1Q8IZC6 1860 aaPredicted RBP2.7□□□□□ -1.98
PTPN13-202ENST00000411767 ACACBO00763 2458 aa2.7□□□□□ -1.98
PTPN13-202ENST00000411767 A8MU10 97 aa2.69□□□□□ -1.98
PTPN13-202ENST00000411767 XIRP2A4UGR9 3374 aa2.69□□□□□ -1.98
PTPN13-202ENST00000411767 LINC00472Q9H8W2 130 aa2.69□□□□□ -1.98
PTPN13-202ENST00000411767 ZNF462Q96JM2 2506 aa2.69□□□□□ -1.98
PTPN13-202ENST00000411767 SPTBN5Q9NRC6 3674 aaKnown RBP2.69□□□□□ -1.98
PTPN13-202ENST00000411767 PCSK5Q92824 1860 aa2.69□□□□□ -1.98
PTPN13-202ENST00000411767 C2CD3Q4AC94 2353 aa2.68□□□□□ -1.98
PTPN13-202ENST00000411767 KRTAP11-1Q8IUC1 163 aa2.68□□□□□ -1.98
PTPN13-202ENST00000411767 ACANP16112 2415 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms