RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TRBV10-3A0A0K0K1G6 114 aa7.92□□□□□ -1.14
HLA-DQB2-229ENST00000411527 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
HLA-DQB2-229ENST00000411527 MEIG1Q5JSS6 88 aa7.92□□□□□ -1.14
HLA-DQB2-229ENST00000411527 SSBP3-AS1Q7Z2R9 100 aa7.92□□□□□ -1.14
HLA-DQB2-229ENST00000411527 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
HLA-DQB2-229ENST00000411527 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
HLA-DQB2-229ENST00000411527 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
HLA-DQB2-229ENST00000411527 SLC25A20O43772 301 aa7.91□□□□□ -1.14
HLA-DQB2-229ENST00000411527 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
HLA-DQB2-229ENST00000411527 ERC2-IT1O76042 136 aa7.9□□□□□ -1.14
HLA-DQB2-229ENST00000411527 XP32Q5T750 250 aa7.9□□□□□ -1.14
HLA-DQB2-229ENST00000411527 B5MCH6 92 aa7.89□□□□□ -1.15
HLA-DQB2-229ENST00000411527 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
HLA-DQB2-229ENST00000411527 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
HLA-DQB2-229ENST00000411527 MIEN1Q9BRT3 115 aa7.88□□□□□ -1.15
HLA-DQB2-229ENST00000411527 VAMP8Q9BV40 100 aa7.88□□□□□ -1.15
HLA-DQB2-229ENST00000411527 HERV-K104P63124 156 aa7.87□□□□□ -1.15
HLA-DQB2-229ENST00000411527 CBY1Q9Y3M2 126 aa7.87□□□□□ -1.15
HLA-DQB2-229ENST00000411527 TRAV12-1A0A0B4J245 112 aa7.85□□□□□ -1.15
HLA-DQB2-229ENST00000411527 COL5A1-AS1Q5SY13 56 aa7.85□□□□□ -1.15
HLA-DQB2-229ENST00000411527 Q9BRP9 147 aa7.85□□□□□ -1.15
HLA-DQB2-229ENST00000411527 C20orf202A1L168 122 aa7.84□□□□□ -1.15
HLA-DQB2-229ENST00000411527 SNHG12Q9BXW3 62 aa7.84□□□□□ -1.15
HLA-DQB2-229ENST00000411527 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
HLA-DQB2-229ENST00000411527 MYMXA0A1B0GTQ4 84 aa7.83□□□□□ -1.16
HLA-DQB2-229ENST00000411527 C9orf153Q5TBE3 101 aa7.83□□□□□ -1.16
HLA-DQB2-229ENST00000411527 Q6ZRX8 168 aa7.83□□□□□ -1.16
HLA-DQB2-229ENST00000411527 IFI27L1Q96BM0 104 aa7.83□□□□□ -1.16
HLA-DQB2-229ENST00000411527 UQCR10Q9UDW1 63 aa7.83□□□□□ -1.16
HLA-DQB2-229ENST00000411527 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
HLA-DQB2-229ENST00000411527 LOC107984156A0A0G2JMH3 177 aa7.81□□□□□ -1.16
HLA-DQB2-229ENST00000411527 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
HLA-DQB2-229ENST00000411527 SERF1AO75920 110 aa7.81□□□□□ -1.16
HLA-DQB2-229ENST00000411527 MT1HP80294 61 aa7.81□□□□□ -1.16
HLA-DQB2-229ENST00000411527 ARL17AQ8IVW1 177 aa7.81□□□□□ -1.16
HLA-DQB2-229ENST00000411527 DLEU1O43261 78 aa7.8□□□□□ -1.16
HLA-DQB2-229ENST00000411527 KRTDAPP60985 99 aa7.8□□□□□ -1.16
HLA-DQB2-229ENST00000411527 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
HLA-DQB2-229ENST00000411527 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
HLA-DQB2-229ENST00000411527 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
HLA-DQB2-229ENST00000411527 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
HLA-DQB2-229ENST00000411527 SPANXB1Q9NS25 103 aaPredicted RBP7.78□□□□□ -1.16
HLA-DQB2-229ENST00000411527 PAM16Q9Y3D7 125 aa7.78□□□□□ -1.16
HLA-DQB2-229ENST00000411527 CFC1BP0CG36 223 aa7.77□□□□□ -1.17
HLA-DQB2-229ENST00000411527 TSPEAR-AS2P59090 65 aa7.77□□□□□ -1.17
HLA-DQB2-229ENST00000411527 SPATA45Q537H7 98 aa7.77□□□□□ -1.17
HLA-DQB2-229ENST00000411527 ST20-AS1Q8NBB2 130 aa7.77□□□□□ -1.17
HLA-DQB2-229ENST00000411527 C9orf92A6NGG3 77 aa7.76□□□□□ -1.17
HLA-DQB2-229ENST00000411527 IGLV6-57P01721 117 aa7.76□□□□□ -1.17
HLA-DQB2-229ENST00000411527 BATFQ16520 125 aa7.76□□□□□ -1.17
HLA-DQB2-229ENST00000411527 TRAV23DV6A0A075B6W5 121 aa7.75□□□□□ -1.17
HLA-DQB2-229ENST00000411527 H0Y8G0 127 aa7.75□□□□□ -1.17
HLA-DQB2-229ENST00000411527 LEPROTO15243 131 aa7.75□□□□□ -1.17
HLA-DQB2-229ENST00000411527 HSBP1O75506 76 aa7.75□□□□□ -1.17
HLA-DQB2-229ENST00000411527 HSBP1L1C9JCN9 74 aa7.74□□□□□ -1.17
HLA-DQB2-229ENST00000411527 NDUFC2O95298 119 aa7.74□□□□□ -1.17
HLA-DQB2-229ENST00000411527 PET117Q6UWS5 81 aa7.74□□□□□ -1.17
HLA-DQB2-229ENST00000411527 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
HLA-DQB2-229ENST00000411527 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQB2-229ENST00000411527 LIMD2Q9BT23 127 aa7.73□□□□□ -1.17
HLA-DQB2-229ENST00000411527 J3QQQ9 107 aa7.72□□□□□ -1.17
HLA-DQB2-229ENST00000411527 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
HLA-DQB2-229ENST00000411527 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
HLA-DQB2-229ENST00000411527 NPC2P61916 151 aa7.71□□□□□ -1.18
HLA-DQB2-229ENST00000411527 C3orf79P0CE67 100 aa7.7□□□□□ -1.18
HLA-DQB2-229ENST00000411527 HINT1P49773 126 aaPredicted RBP7.7□□□□□ -1.18
HLA-DQB2-229ENST00000411527 LINC00310P59036 64 aa7.7□□□□□ -1.18
HLA-DQB2-229ENST00000411527 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
HLA-DQB2-229ENST00000411527 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
HLA-DQB2-229ENST00000411527 LGALS3P17931 250 aaKnown RBP7.69□□□□□ -1.18
HLA-DQB2-229ENST00000411527 NMUP48645 174 aa7.69□□□□□ -1.18
HLA-DQB2-229ENST00000411527 SOSTDC1Q6X4U4 206 aa7.69□□□□□ -1.18
HLA-DQB2-229ENST00000411527 HSPB8Q9UJY1 196 aa7.69□□□□□ -1.18
HLA-DQB2-229ENST00000411527 SPRR1BP22528 89 aa7.68□□□□□ -1.18
HLA-DQB2-229ENST00000411527 PLNP26678 52 aa7.68□□□□□ -1.18
HLA-DQB2-229ENST00000411527 SLC25A34Q6PIV7 304 aa7.68□□□□□ -1.18
HLA-DQB2-229ENST00000411527 M0R2T5 61 aa7.67□□□□□ -1.18
HLA-DQB2-229ENST00000411527 LEPROTL1O95214 131 aa7.67□□□□□ -1.18
HLA-DQB2-229ENST00000411527 HERVK_113P61574 105 aa7.67□□□□□ -1.18
HLA-DQB2-229ENST00000411527 ADAMTSL4-AS1Q5T5F5 129 aa7.67□□□□□ -1.18
HLA-DQB2-229ENST00000411527 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
HLA-DQB2-229ENST00000411527 DPM2O94777 84 aa7.66□□□□□ -1.18
HLA-DQB2-229ENST00000411527 UBE2V1Q13404 147 aa7.66□□□□□ -1.18
HLA-DQB2-229ENST00000411527 DHRS4-AS1Q9P1J3 65 aa7.65□□□□□ -1.18
HLA-DQB2-229ENST00000411527 A0A0J9YXY3 114 aa7.64□□□□□ -1.19
HLA-DQB2-229ENST00000411527 OR13C6PQ8NH95 151 aa7.64□□□□□ -1.19
HLA-DQB2-229ENST00000411527 IGKCP01834 107 aa7.63□□□□□ -1.19
HLA-DQB2-229ENST00000411527 VAMP3Q15836 100 aa7.63□□□□□ -1.19
HLA-DQB2-229ENST00000411527 SYS1-DBNDD2H3BUS1 97 aa7.62□□□□□ -1.19
HLA-DQB2-229ENST00000411527 H7C2G1 150 aa7.62□□□□□ -1.19
HLA-DQB2-229ENST00000411527 CD164Q04900 197 aa7.62□□□□□ -1.19
HLA-DQB2-229ENST00000411527 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
HLA-DQB2-229ENST00000411527 PCP4P48539 62 aa7.61□□□□□ -1.19
HLA-DQB2-229ENST00000411527 TAL2Q16559 108 aa7.61□□□□□ -1.19
HLA-DQB2-229ENST00000411527 Q1RN00 199 aa7.61□□□□□ -1.19
HLA-DQB2-229ENST00000411527 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
HLA-DQB2-229ENST00000411527 SPANXCQ9NY87 97 aa7.6□□□□□ -1.19
HLA-DQB2-229ENST00000411527 ATOH7Q8N100 152 aa7.59□□□□□ -1.19
HLA-DQB2-229ENST00000411527 LINC00308Q8TCZ7 52 aa7.59□□□□□ -1.19
HLA-DQB2-229ENST00000411527 A6NDN8 102 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms