RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 MGAM2Q2M2H8 2515 aa1.79□□□□□ -2.12
LSM5-205ENST00000409952 LAMA1P25391 3075 aa1.79□□□□□ -2.12
LSM5-205ENST00000409952 F2Z2F3 143 aa1.79□□□□□ -2.12
LSM5-205ENST00000409952 RPL37P61927 97 aaKnown RBP1.79□□□□□ -2.12
LSM5-205ENST00000409952 TENM1Q9UKZ4 2725 aa1.79□□□□□ -2.12
LSM5-205ENST00000409952 DCHS2Q6V1P9 2916 aa1.78□□□□□ -2.12
LSM5-205ENST00000409952 WNK1Q9H4A3 2382 aa1.78□□□□□ -2.12
LSM5-205ENST00000409952 NCOA6Q14686 2063 aaPredicted RBP1.78□□□□□ -2.12
LSM5-205ENST00000409952 NBPF19A0A087WUL8 3843 aa1.78□□□□□ -2.13
LSM5-205ENST00000409952 ASCC3Q8N3C0 2202 aaKnown RBP1.78□□□□□ -2.13
LSM5-205ENST00000409952 SPTBP11277 2137 aa1.78□□□□□ -2.13
LSM5-205ENST00000409952 LAMA5O15230 3695 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 APC2O95996 2303 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 TRBV25-1A0A075B6N4 114 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 C10orf142B7Z368 130 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 CYB5AP00167 134 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 UQCRHP07919 91 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 SAA2P0DJI9 122 aaPredicted RBP1.77□□□□□ -2.13
LSM5-205ENST00000409952 ZNF137PP52743 207 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 PMCHL1Q16048 86 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 FAM223AQ8IWN6 122 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 SMIM11BQ8TCY0 68 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 SMIM4Q8WVI0 70 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 S100A16Q96FQ6 103 aaKnown RBP1.77□□□□□ -2.13
LSM5-205ENST00000409952 DOCK2Q92608 1830 aa1.77□□□□□ -2.13
LSM5-205ENST00000409952 FLG2Q5D862 2391 aaPredicted RBP1.77□□□□□ -2.13
LSM5-205ENST00000409952 RYR1P21817 5038 aa1.76□□□□□ -2.13
LSM5-205ENST00000409952 BIRC6Q9NR09 4857 aa1.76□□□□□ -2.13
LSM5-205ENST00000409952 GVQW2A0A096LPI5 108 aaPredicted RBP1.76□□□□□ -2.13
LSM5-205ENST00000409952 NMBP08949 121 aa1.76□□□□□ -2.13
LSM5-205ENST00000409952 PEA15Q15121 130 aa1.76□□□□□ -2.13
LSM5-205ENST00000409952 SORL1Q92673 2214 aa1.76□□□□□ -2.13
LSM5-205ENST00000409952 RYR3Q15413 4870 aa1.75□□□□□ -2.13
LSM5-205ENST00000409952 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.75□□□□□ -2.13
LSM5-205ENST00000409952 URB1O60287 2271 aaKnown RBP1.75□□□□□ -2.13
LSM5-205ENST00000409952 PLIN4Q96Q06 1357 aa1.75□□□□□ -2.13
LSM5-205ENST00000409952 APCP25054 2843 aa1.75□□□□□ -2.13
LSM5-205ENST00000409952 K7EIL1 84 aa1.75□□□□□ -2.13
LSM5-205ENST00000409952 COX17Q14061 63 aa1.75□□□□□ -2.13
LSM5-205ENST00000409952 CFAP126Q5VTH2 177 aa1.75□□□□□ -2.13
LSM5-205ENST00000409952 ATMQ13315 3056 aa1.75□□□□□ -2.13
LSM5-205ENST00000409952 SPENQ96T58 3664 aaKnown RBP1.75□□□□□ -2.13
LSM5-205ENST00000409952 PRRC2CQ9Y520 2896 aaKnown RBP1.75□□□□□ -2.13
LSM5-205ENST00000409952 SONP18583 2426 aaKnown RBP1.75□□□□□ -2.13
LSM5-205ENST00000409952 MGAQ8IWI9 3026 aa1.74□□□□□ -2.13
LSM5-205ENST00000409952 FAM223BA6NKX1 122 aa1.74□□□□□ -2.13
LSM5-205ENST00000409952 Q6ZRX8 168 aa1.74□□□□□ -2.13
LSM5-205ENST00000409952 RABAC1Q9UI14 185 aa1.74□□□□□ -2.13
LSM5-205ENST00000409952 MEGF8Q7Z7M0 2845 aa1.74□□□□□ -2.13
LSM5-205ENST00000409952 SIPA1L3O60292 1781 aaPredicted RBP1.73□□□□□ -2.13
LSM5-205ENST00000409952 NFAT5O94916 1531 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 BCE1O60756 84 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 SPINT3P49223 89 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 FXYD6P3P58550 94 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 TDRG1Q3Y452 100 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 HIGD1BQ9P298 99 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 CSMD1Q96PZ7 3565 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 PI4KAP42356 2102 aa1.73□□□□□ -2.13
LSM5-205ENST00000409952 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 NSD1Q96L73 2696 aaPredicted RBP1.72□□□□□ -2.13
LSM5-205ENST00000409952 ZNF815PA8K554 130 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 LOC730098B7Z3J9 87 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 MGPP08493 103 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 PSMG4Q5JS54 123 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 MXRA5Q9NR99 2828 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 ACANP16112 2415 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 PSME4Q14997 1843 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 EDC4Q6P2E9 1401 aaKnown RBP1.72□□□□□ -2.13
LSM5-205ENST00000409952 A0A1B0GUL6 1792 aa1.72□□□□□ -2.13
LSM5-205ENST00000409952 TANC1Q9C0D5 1861 aa1.71□□□□□ -2.14
LSM5-205ENST00000409952 KIAA1109Q2LD37 5005 aa1.71□□□□□ -2.14
LSM5-205ENST00000409952 A0A1B0GWA3 101 aa1.71□□□□□ -2.14
LSM5-205ENST00000409952 GCHFRP30047 84 aa1.71□□□□□ -2.14
LSM5-205ENST00000409952 HYDINQ4G0P3 5121 aa1.71□□□□□ -2.14
LSM5-205ENST00000409952 TENM3Q9P273 2699 aa1.71□□□□□ -2.14
LSM5-205ENST00000409952 TCHHQ07283 1943 aa1.7□□□□□ -2.14
LSM5-205ENST00000409952 M0R3E3 92 aa1.7□□□□□ -2.14
LSM5-205ENST00000409952 ARL14EPLP0DKL9 152 aa1.7□□□□□ -2.14
LSM5-205ENST00000409952 SMIM11AP58511 58 aa1.7□□□□□ -2.14
LSM5-205ENST00000409952 ZNF720Q7Z2F6 126 aa1.7□□□□□ -2.14
LSM5-205ENST00000409952 LOC285556D6RIA3 1793 aa1.7□□□□□ -2.14
LSM5-205ENST00000409952 CD163L1Q9NR16 1453 aa1.69□□□□□ -2.14
LSM5-205ENST00000409952 H3BQF6 201 aa1.69□□□□□ -2.14
LSM5-205ENST00000409952 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
LSM5-205ENST00000409952 SPRR4Q96PI1 79 aa1.69□□□□□ -2.14
LSM5-205ENST00000409952 S100A13Q99584 98 aa1.69□□□□□ -2.14
LSM5-205ENST00000409952 LINC00472Q9H8W2 130 aa1.69□□□□□ -2.14
LSM5-205ENST00000409952 DOCK11Q5JSL3 2073 aa1.68□□□□□ -2.14
LSM5-205ENST00000409952 ANKRD50Q9ULJ7 1429 aa1.68□□□□□ -2.14
LSM5-205ENST00000409952 KMT2CQ8NEZ4 4911 aaKnown RBP1.68□□□□□ -2.14
LSM5-205ENST00000409952 C7orf77A4D0Y5 90 aa1.68□□□□□ -2.14
LSM5-205ENST00000409952 G3V318 75 aa1.68□□□□□ -2.14
LSM5-205ENST00000409952 PRR15LQ9BU68 103 aa1.68□□□□□ -2.14
LSM5-205ENST00000409952 ZANQ9Y493 2812 aa1.68□□□□□ -2.14
LSM5-205ENST00000409952 TENM2Q9NT68 2774 aa1.68□□□□□ -2.14
LSM5-205ENST00000409952 EPPK1P58107 5090 aaKnown RBP1.67□□□□□ -2.14
LSM5-205ENST00000409952 ETDBQ3ZM63 59 aa1.67□□□□□ -2.14
LSM5-205ENST00000409952 CNTRLQ7Z7A1 2325 aa1.67□□□□□ -2.14
LSM5-205ENST00000409952 RGPD2P0DJD1 1756 aa1.67□□□□□ -2.14
LSM5-205ENST00000409952 PIN1P1O15428 100 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms