RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PKD1L3Q7Z443 1732 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 TIAM2Q8IVF5 1701 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 DNAH8Q96JB1 4490 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 KIF20BQ96Q89 1820 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 C7orf77A4D0Y5 90 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 CRYM-AS1A6NIL9 109 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 K7EP13 123 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 C1orf54Q8WWF1 131 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 ABCC2Q92887 1545 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 PDE4DIPQ5VU43 2346 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 KALRNO60229 2985 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 FAM24AA6NFZ4 105 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 TMEM262E9PQX1 116 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 PSMG4Q5JS54 123 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 CGREF1Q99674 301 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 DPH3P1Q9H4G8 78 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 A0A0C4DFX4 3053 aa-0.82□□□□□ -2.54
PMS1-203ENST00000409593 RGPD3A6NKT7 1758 aaPredicted RBP-0.83□□□□□ -2.54
PMS1-203ENST00000409593 RGPD4Q7Z3J3 1758 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 FAM186AA6NE01 2351 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 NDUFA3O95167 84 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 PRLHP81277 87 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 AP4S1Q9Y587 144 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 NESP48681 1621 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 UTP20O75691 2785 aaKnown RBP-0.83□□□□□ -2.54
PMS1-203ENST00000409593 ITPR1Q14643 2758 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 CRYBG1Q9Y4K1 1723 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 MAGI3Q5TCQ9 1506 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 LRRC7Q96NW7 1537 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 LRRK2Q5S007 2527 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 WIZO95785 1651 aa-0.83□□□□□ -2.54
PMS1-203ENST00000409593 DEPDC5O75140 1603 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 AKAIN1P0CW23 69 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 ASIPP42127 132 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 NALCNQ8IZF0 1738 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 MLH3Q9UHC1 1453 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 RAPGEF2Q9Y4G8 1499 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 NBEAQ8NFP9 2946 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 CCDC168Q8NDH2 2452 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 ABCA3Q99758 1704 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 TRBV25-1A0A075B6N4 114 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 H3BQ15 152 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 COX7BP24311 80 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 KRTDAPP60985 99 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 PMCHL1Q16048 86 aa-0.84□□□□□ -2.54
PMS1-203ENST00000409593 MYO15AQ9UKN7 3530 aa-0.85□□□□□ -2.54
PMS1-203ENST00000409593 IGLC2P0DOY2 106 aa-0.85□□□□□ -2.55
PMS1-203ENST00000409593 IGLC3P0DOY3 106 aa-0.85□□□□□ -2.55
PMS1-203ENST00000409593 RPL38P63173 70 aaKnown RBP-0.85□□□□□ -2.55
PMS1-203ENST00000409593 CCDC58Q4VC31 144 aa-0.85□□□□□ -2.55
PMS1-203ENST00000409593 CACFD1Q9UGQ2 172 aa-0.85□□□□□ -2.55
PMS1-203ENST00000409593 UBE2D4Q9Y2X8 147 aa-0.85□□□□□ -2.55
PMS1-203ENST00000409593 SUPT6HQ7KZ85 1726 aaKnown RBP-0.86□□□□□ -2.55
PMS1-203ENST00000409593 EIF4G3O43432 1585 aaKnown RBP-0.86□□□□□ -2.55
PMS1-203ENST00000409593 NWD1Q149M9 1564 aa-0.86□□□□□ -2.55
PMS1-203ENST00000409593 SVBPQ8N300 66 aa-0.86□□□□□ -2.55
PMS1-203ENST00000409593 PRO3102Q9H379 93 aa-0.86□□□□□ -2.55
PMS1-203ENST00000409593 POLR1AO95602 1720 aaPredicted RBP-0.86□□□□□ -2.55
PMS1-203ENST00000409593 CDC42BPAQ5VT25 1732 aa-0.86□□□□□ -2.55
PMS1-203ENST00000409593 NRXN1Q9ULB1 1477 aa-0.86□□□□□ -2.55
PMS1-203ENST00000409593 CEP290O15078 2479 aa-0.86□□□□□ -2.55
PMS1-203ENST00000409593 C5orf42Q9H799 3197 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 PRDM15P57071 1507 aaPredicted RBP-0.87□□□□□ -2.55
PMS1-203ENST00000409593 RGPD1P0DJD0 1748 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 hADV29S1A0JD25 119 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 NDUFC1O43677 76 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 SNAPC5O75971 98 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 MPC2O95563 127 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 SMR3BP02814 79 aaPredicted RBP-0.87□□□□□ -2.55
PMS1-203ENST00000409593 UQCRHP07919 91 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 C3orf79P0CE67 100 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 LINC00158P58513 81 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 PZPP20742 1482 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 ABCC10Q5T3U5 1492 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 UBR3Q6ZT12 1888 aa-0.87□□□□□ -2.55
PMS1-203ENST00000409593 CLTCQ00610 1675 aaKnown RBP-0.87□□□□□ -2.55
PMS1-203ENST00000409593 MT1EP04732 61 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 DEFB106AQ8N104 65 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 IER3IP1Q9Y5U9 82 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 FRYQ5TBA9 3013 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 TLN2Q9Y4G6 2542 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.88□□□□□ -2.55
PMS1-203ENST00000409593 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.88□□□□□ -2.55
PMS1-203ENST00000409593 RANBP2P49792 3224 aaKnown RBP-0.88□□□□□ -2.55
PMS1-203ENST00000409593 ROCK2O75116 1388 aaKnown RBP-0.88□□□□□ -2.55
PMS1-203ENST00000409593 ANKRD36BQ8N2N9 1353 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 TMEM218A2RU14 115 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 HMGN3Q15651 99 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 CLPSL2Q6UWE3 100 aa-0.88□□□□□ -2.55
PMS1-203ENST00000409593 ITPR2Q14571 2701 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 CEP295Q9C0D2 2601 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 ATP7BP35670 1465 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 D6R8Y8 96 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 GNG4P50150 75 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 ETDBQ3ZM63 59 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 ALKAL2Q6UX46 152 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 MUSTN1Q8IVN3 82 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 TRGV9Q99603 122 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 ZNF831Q5JPB2 1677 aa-0.89□□□□□ -2.55
PMS1-203ENST00000409593 ANKRD36CQ5JPF3 1778 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms