RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SMIM13P0DJ93 91 aa4.29□□□□□ -1.72
LSM5-202ENST00000409292 COMMD7Q86VX2 200 aa4.29□□□□□ -1.72
LSM5-202ENST00000409292 MIR7-3HGQ8N6C7 128 aa4.29□□□□□ -1.72
LSM5-202ENST00000409292 MYMXA0A1B0GTQ4 84 aa4.28□□□□□ -1.72
LSM5-202ENST00000409292 DDTP30046 118 aa4.28□□□□□ -1.72
LSM5-202ENST00000409292 S100A7L2Q5SY68 101 aa4.28□□□□□ -1.72
LSM5-202ENST00000409292 Q8NDZ9 215 aa4.28□□□□□ -1.72
LSM5-202ENST00000409292 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
LSM5-202ENST00000409292 IFITM2Q01629 132 aa4.27□□□□□ -1.73
LSM5-202ENST00000409292 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
LSM5-202ENST00000409292 TRBV10-2A0A0K0K1G8 114 aa4.26□□□□□ -1.73
LSM5-202ENST00000409292 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
LSM5-202ENST00000409292 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
LSM5-202ENST00000409292 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
LSM5-202ENST00000409292 PCOTHQ58A44 107 aa4.26□□□□□ -1.73
LSM5-202ENST00000409292 UQCC3Q6UW78 93 aa4.26□□□□□ -1.73
LSM5-202ENST00000409292 Q6ZRX8 168 aa4.26□□□□□ -1.73
LSM5-202ENST00000409292 SPANXB1Q9NS25 103 aaPredicted RBP4.26□□□□□ -1.73
LSM5-202ENST00000409292 TRAV12-1A0A0B4J245 112 aa4.25□□□□□ -1.73
LSM5-202ENST00000409292 TRAPPC1Q9Y5R8 145 aa4.25□□□□□ -1.73
LSM5-202ENST00000409292 TRAV23DV6A0A075B6W5 121 aa4.24□□□□□ -1.73
LSM5-202ENST00000409292 MT1HP80294 61 aa4.24□□□□□ -1.73
LSM5-202ENST00000409292 PMCHL1Q16048 86 aa4.24□□□□□ -1.73
LSM5-202ENST00000409292 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
LSM5-202ENST00000409292 LAMTOR3Q9UHA4 124 aa4.24□□□□□ -1.73
LSM5-202ENST00000409292 A0A096LNJ9 63 aa4.23□□□□□ -1.73
LSM5-202ENST00000409292 TMEM218A2RU14 115 aa4.23□□□□□ -1.73
LSM5-202ENST00000409292 C9orf92A6NGG3 77 aa4.23□□□□□ -1.73
LSM5-202ENST00000409292 ERC2-IT1O76042 136 aa4.23□□□□□ -1.73
LSM5-202ENST00000409292 HERVK_113P61574 105 aa4.23□□□□□ -1.73
LSM5-202ENST00000409292 C18orf32Q8TCD1 76 aa4.23□□□□□ -1.73
LSM5-202ENST00000409292 IFI27L1Q96BM0 104 aa4.23□□□□□ -1.73
LSM5-202ENST00000409292 NDUFC2O95298 119 aa4.22□□□□□ -1.73
LSM5-202ENST00000409292 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
LSM5-202ENST00000409292 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
LSM5-202ENST00000409292 RHEBQ15382 184 aa4.22□□□□□ -1.73
LSM5-202ENST00000409292 CLLU1Q5K131 121 aa4.22□□□□□ -1.73
LSM5-202ENST00000409292 Q9BRP9 147 aa4.22□□□□□ -1.73
LSM5-202ENST00000409292 RPS10P5Q9NQ39 176 aa4.22□□□□□ -1.73
LSM5-202ENST00000409292 LOC107984156A0A0G2JMH3 177 aa4.21□□□□□ -1.74
LSM5-202ENST00000409292 ZNF73O43830 326 aaPredicted RBP4.21□□□□□ -1.74
LSM5-202ENST00000409292 LGALS3P17931 250 aaKnown RBP4.21□□□□□ -1.74
LSM5-202ENST00000409292 NMUP48645 174 aa4.21□□□□□ -1.74
LSM5-202ENST00000409292 HRCT1Q6UXD1 115 aa4.21□□□□□ -1.74
LSM5-202ENST00000409292 ARL17AQ8IVW1 177 aa4.21□□□□□ -1.74
LSM5-202ENST00000409292 CHCHD1Q96BP2 118 aaKnown RBP4.21□□□□□ -1.74
LSM5-202ENST00000409292 DHRS4-AS1Q9P1J3 65 aa4.21□□□□□ -1.74
LSM5-202ENST00000409292 H7C2G1 150 aa4.2□□□□□ -1.74
LSM5-202ENST00000409292 HSBP1O75506 76 aa4.2□□□□□ -1.74
LSM5-202ENST00000409292 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
LSM5-202ENST00000409292 PRO1933Q9H354 126 aa4.2□□□□□ -1.74
LSM5-202ENST00000409292 H0Y8G0 127 aa4.19□□□□□ -1.74
LSM5-202ENST00000409292 LEPROTO15243 131 aa4.19□□□□□ -1.74
LSM5-202ENST00000409292 PLNP26678 52 aa4.19□□□□□ -1.74
LSM5-202ENST00000409292 CD164Q04900 197 aa4.19□□□□□ -1.74
LSM5-202ENST00000409292 TAL2Q16559 108 aa4.19□□□□□ -1.74
LSM5-202ENST00000409292 URB1-AS1Q96HZ7 61 aa4.19□□□□□ -1.74
LSM5-202ENST00000409292 J3QQQ9 107 aa4.18□□□□□ -1.74
LSM5-202ENST00000409292 ST20-AS1Q8NBB2 130 aa4.18□□□□□ -1.74
LSM5-202ENST00000409292 OR13C6PQ8NH95 151 aa4.18□□□□□ -1.74
LSM5-202ENST00000409292 SPRR1BP22528 89 aa4.17□□□□□ -1.74
LSM5-202ENST00000409292 AKR1D1P51857 326 aa4.17□□□□□ -1.74
LSM5-202ENST00000409292 NDUFA5Q16718 116 aa4.17□□□□□ -1.74
LSM5-202ENST00000409292 TCL1BO95988 128 aa4.16□□□□□ -1.74
LSM5-202ENST00000409292 RPL37P61927 97 aaKnown RBP4.16□□□□□ -1.74
LSM5-202ENST00000409292 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
LSM5-202ENST00000409292 TEX49A0A1B0GTD5 131 aa4.15□□□□□ -1.75
LSM5-202ENST00000409292 DPM2O94777 84 aa4.15□□□□□ -1.75
LSM5-202ENST00000409292 LEPROTL1O95214 131 aa4.15□□□□□ -1.75
LSM5-202ENST00000409292 COX7BP24311 80 aa4.15□□□□□ -1.75
LSM5-202ENST00000409292 NPC2P61916 151 aa4.15□□□□□ -1.75
LSM5-202ENST00000409292 DEFB105AQ8NG35 78 aa4.15□□□□□ -1.75
LSM5-202ENST00000409292 HSPB8Q9UJY1 196 aa4.15□□□□□ -1.75
LSM5-202ENST00000409292 CFC1P0CG37 223 aa4.14□□□□□ -1.75
LSM5-202ENST00000409292 Q1RN00 199 aa4.14□□□□□ -1.75
LSM5-202ENST00000409292 Q5XG85 94 aa4.14□□□□□ -1.75
LSM5-202ENST00000409292 Q6Q795 121 aa4.14□□□□□ -1.75
LSM5-202ENST00000409292 LINC00518Q8N0U6 118 aa4.14□□□□□ -1.75
LSM5-202ENST00000409292 SPANXDQ9BXN6 97 aa4.14□□□□□ -1.75
LSM5-202ENST00000409292 SPANXCQ9NY87 97 aa4.14□□□□□ -1.75
LSM5-202ENST00000409292 SNAPINO95295 136 aa4.13□□□□□ -1.75
LSM5-202ENST00000409292 IGKCP01834 107 aa4.13□□□□□ -1.75
LSM5-202ENST00000409292 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
LSM5-202ENST00000409292 F8WEM9 126 aa4.12□□□□□ -1.75
LSM5-202ENST00000409292 APOC3P02656 99 aa4.12□□□□□ -1.75
LSM5-202ENST00000409292 TSPEAR-AS2P59090 65 aa4.12□□□□□ -1.75
LSM5-202ENST00000409292 C10orf91Q5T1B1 145 aa4.12□□□□□ -1.75
LSM5-202ENST00000409292 SVBPQ8N300 66 aa4.12□□□□□ -1.75
LSM5-202ENST00000409292 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
LSM5-202ENST00000409292 A0A0J9YXY3 114 aa4.11□□□□□ -1.75
LSM5-202ENST00000409292 ELOF1P60002 83 aaKnown RBP4.11□□□□□ -1.75
LSM5-202ENST00000409292 C1orf195Q5TG92 126 aa4.11□□□□□ -1.75
LSM5-202ENST00000409292 NHP2Q9NX24 153 aaKnown RBP4.11□□□□□ -1.75
LSM5-202ENST00000409292 C6orf99Q4VX62 202 aa4.1□□□□□ -1.75
LSM5-202ENST00000409292 SMIM29Q86T20 159 aa4.1□□□□□ -1.75
LSM5-202ENST00000409292 LINC00308Q8TCZ7 52 aa4.1□□□□□ -1.75
LSM5-202ENST00000409292 TRBV20-1A0A075B6N2 111 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 A0A1B0GWB2 263 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 A4D1N5 150 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms