RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SMR3AQ99954 134 aa8.17□□□□□ -1.1
SHANK2-203ENST00000409161 C8orf17Q9NRJ1 99 aa8.16□□□□□ -1.1
SHANK2-203ENST00000409161 MGAM2Q2M2H8 2515 aa8.16□□□□□ -1.1
SHANK2-203ENST00000409161 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
SHANK2-203ENST00000409161 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
SHANK2-203ENST00000409161 PRO3102Q9H379 93 aa8.15□□□□□ -1.1
SHANK2-203ENST00000409161 WIPF1O43516 503 aa8.15□□□□□ -1.11
SHANK2-203ENST00000409161 ATRQ13535 2644 aa8.14□□□□□ -1.11
SHANK2-203ENST00000409161 Q1T7F1 81 aa8.14□□□□□ -1.11
SHANK2-203ENST00000409161 NBEAL1Q6ZS30 2694 aa8.14□□□□□ -1.11
SHANK2-203ENST00000409161 Q8NAQ8 132 aa8.13□□□□□ -1.11
SHANK2-203ENST00000409161 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
SHANK2-203ENST00000409161 IGFL1Q6UW32 110 aa8.13□□□□□ -1.11
SHANK2-203ENST00000409161 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
SHANK2-203ENST00000409161 LINC01554Q52M75 96 aa8.11□□□□□ -1.11
SHANK2-203ENST00000409161 FLNAP21333 2647 aaKnown RBP8.11□□□□□ -1.11
SHANK2-203ENST00000409161 KLK9Q2XQG4 91 aa8.11□□□□□ -1.11
SHANK2-203ENST00000409161 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
SHANK2-203ENST00000409161 CENPEQ02224 2701 aa8.1□□□□□ -1.11
SHANK2-203ENST00000409161 LINC00588Q9Y4M8 146 aa8.1□□□□□ -1.11
SHANK2-203ENST00000409161 CFAP46Q8IYW2 2715 aa8.1□□□□□ -1.11
SHANK2-203ENST00000409161 LINC00304Q8N9R0 145 aa8.09□□□□□ -1.11
SHANK2-203ENST00000409161 A0A1W2PPR1 153 aa8.09□□□□□ -1.12
SHANK2-203ENST00000409161 KRTAP10-9P60411 292 aa8.08□□□□□ -1.12
SHANK2-203ENST00000409161 FAM104AQ969W3 186 aa8.08□□□□□ -1.12
SHANK2-203ENST00000409161 FAM168BA1KXE4 195 aa8.06□□□□□ -1.12
SHANK2-203ENST00000409161 TLX1NBP0CAT3 122 aa8.06□□□□□ -1.12
SHANK2-203ENST00000409161 ZNF861PO60384 105 aa8.06□□□□□ -1.12
SHANK2-203ENST00000409161 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
SHANK2-203ENST00000409161 C15orf56Q8N910 161 aa8.05□□□□□ -1.12
SHANK2-203ENST00000409161 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
SHANK2-203ENST00000409161 OBSCN-AS1Q96MR7 158 aa8.05□□□□□ -1.12
SHANK2-203ENST00000409161 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
SHANK2-203ENST00000409161 Q8N377 158 aa8.04□□□□□ -1.12
SHANK2-203ENST00000409161 PRR34Q9NV39 138 aa8.03□□□□□ -1.12
SHANK2-203ENST00000409161 DSCR10P59022 87 aa8.03□□□□□ -1.12
SHANK2-203ENST00000409161 H3BS24 57 aa8.03□□□□□ -1.12
SHANK2-203ENST00000409161 Q75L30 129 aa8□□□□□ -1.13
SHANK2-203ENST00000409161 ITPR3Q14573 2671 aa7.99□□□□□ -1.13
SHANK2-203ENST00000409161 STAB1Q9NY15 2570 aa7.99□□□□□ -1.13
SHANK2-203ENST00000409161 CSNK1G2-AS1Q8NCQ2 148 aa7.98□□□□□ -1.13
SHANK2-203ENST00000409161 FLNBO75369 2602 aaKnown RBP7.97□□□□□ -1.13
SHANK2-203ENST00000409161 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
SHANK2-203ENST00000409161 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
SHANK2-203ENST00000409161 J3QL48 77 aa7.94□□□□□ -1.14
SHANK2-203ENST00000409161 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
SHANK2-203ENST00000409161 CHD6Q8TD26 2715 aa7.94□□□□□ -1.14
SHANK2-203ENST00000409161 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
SHANK2-203ENST00000409161 IGLV5-48A0A075B6I7 105 aa7.93□□□□□ -1.14
SHANK2-203ENST00000409161 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
SHANK2-203ENST00000409161 WWC2-AS2Q96NR7 200 aa7.92□□□□□ -1.14
SHANK2-203ENST00000409161 A0A0D9SG42 100 aa7.91□□□□□ -1.14
SHANK2-203ENST00000409161 NOTCH1P46531 2555 aa7.91□□□□□ -1.14
SHANK2-203ENST00000409161 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
SHANK2-203ENST00000409161 CNBPP62633 177 aaKnown RBP7.9□□□□□ -1.14
SHANK2-203ENST00000409161 SPRR4Q96PI1 79 aa7.9□□□□□ -1.14
SHANK2-203ENST00000409161 KMT2BQ9UMN6 2715 aaPredicted RBP7.89□□□□□ -1.15
SHANK2-203ENST00000409161 A0A1B0GU33 70 aa7.88□□□□□ -1.15
SHANK2-203ENST00000409161 HELZ2Q9BYK8 2649 aaKnown RBP7.88□□□□□ -1.15
SHANK2-203ENST00000409161 EP400Q96L91 3159 aa7.88□□□□□ -1.15
SHANK2-203ENST00000409161 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
SHANK2-203ENST00000409161 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
SHANK2-203ENST00000409161 C9orf163Q8N9P6 203 aa7.88□□□□□ -1.15
SHANK2-203ENST00000409161 GCN1Q92616 2671 aaKnown RBP7.87□□□□□ -1.15
SHANK2-203ENST00000409161 LINC00612Q8N6U2 182 aa7.86□□□□□ -1.15
SHANK2-203ENST00000409161 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
SHANK2-203ENST00000409161 UNC79Q9P2D8 2635 aa7.84□□□□□ -1.15
SHANK2-203ENST00000409161 SRCAPQ6ZRS2 3230 aa7.83□□□□□ -1.16
SHANK2-203ENST00000409161 Q8N1X5 172 aa7.83□□□□□ -1.16
SHANK2-203ENST00000409161 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
SHANK2-203ENST00000409161 A0A087WTM6 91 aa7.82□□□□□ -1.16
SHANK2-203ENST00000409161 TEX15Q9BXT5 2789 aa7.81□□□□□ -1.16
SHANK2-203ENST00000409161 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
SHANK2-203ENST00000409161 COL6A5A8TX70 2615 aa7.8□□□□□ -1.16
SHANK2-203ENST00000409161 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
SHANK2-203ENST00000409161 HRES1P13985 223 aa7.79□□□□□ -1.16
SHANK2-203ENST00000409161 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
SHANK2-203ENST00000409161 KRTAP24-1Q3LI83 254 aa7.77□□□□□ -1.17
SHANK2-203ENST00000409161 C19orf73Q9NVV2 129 aa7.77□□□□□ -1.17
SHANK2-203ENST00000409161 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
SHANK2-203ENST00000409161 STAB2Q8WWQ8 2551 aa7.74□□□□□ -1.17
SHANK2-203ENST00000409161 PRR26Q8N8Z3 221 aa7.74□□□□□ -1.17
SHANK2-203ENST00000409161 Q8N9P0 234 aaPredicted RBP7.74□□□□□ -1.17
SHANK2-203ENST00000409161 GIG44P09565 113 aaPredicted RBP7.74□□□□□ -1.17
SHANK2-203ENST00000409161 FAM229BQ4G0N7 80 aa7.73□□□□□ -1.17
SHANK2-203ENST00000409161 TNP2Q05952 138 aa7.72□□□□□ -1.17
SHANK2-203ENST00000409161 ZNF575Q86XF7 245 aa7.72□□□□□ -1.17
SHANK2-203ENST00000409161 A0A1W2PNN7 141 aa7.71□□□□□ -1.18
SHANK2-203ENST00000409161 Q5XG85 94 aa7.7□□□□□ -1.18
SHANK2-203ENST00000409161 A0A0G2JQZ4 141 aa7.7□□□□□ -1.18
SHANK2-203ENST00000409161 Q6ZSA8 131 aa7.7□□□□□ -1.18
SHANK2-203ENST00000409161 K7EIL1 84 aa7.69□□□□□ -1.18
SHANK2-203ENST00000409161 KRTAP10-11P60412 298 aa7.68□□□□□ -1.18
SHANK2-203ENST00000409161 ANAPC11Q9NYG5 84 aa7.67□□□□□ -1.18
SHANK2-203ENST00000409161 Q5VV11 94 aa7.66□□□□□ -1.18
SHANK2-203ENST00000409161 S4R3F8 94 aa7.66□□□□□ -1.18
SHANK2-203ENST00000409161 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
SHANK2-203ENST00000409161 FP248Q71RG6 208 aaPredicted RBP7.63□□□□□ -1.19
SHANK2-203ENST00000409161 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
SHANK2-203ENST00000409161 CEP350Q5VT06 3117 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms