RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 COPS9Q8WXC6 57 aa2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 LINC01600Q96MT4 127 aa2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 ANKRD17O75179 2603 aaKnown RBP2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 KMT2BQ9UMN6 2715 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 ABCA12Q86UK0 2595 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 IGLV10-54A0A075B6I4 117 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 IGKV3OR2-268A0A0C4DH90 116 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 TMEM262E9PQX1 116 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 DEFB4AO15263 64 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 COX6CP09669 75 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 SPART-AS1P0CW21 52 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 MIFP14174 115 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 NPC2P61916 151 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 SS18Q15532 418 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 ATXN8Q156A1 80 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 DEFB135Q30KP9 77 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 SOSTDC1Q6X4U4 206 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 TEN1Q86WV5 123 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 DAND5Q8N907 189 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 COX7B2Q8TF08 81 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 ITPR3Q14573 2671 aa2.41□□□□□ -2.02
HMGB3P18-201ENST00000406327 DOPEY2Q9Y3R5 2298 aa2.4□□□□□ -2.02
HMGB3P18-201ENST00000406327 A0A096LPF7 62 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 TRBV10-2A0A0K0K1G8 114 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 IBA57-AS1B1ANH7 110 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 C9JAW5 83 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 MEIG1Q5JSS6 88 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 C5orf38Q86SI9 138 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 ANKRD29Q8N6D5 301 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 PPDPFLQ8WWR9 84 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 CARD19Q96LW7 228 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 TOMM7Q9P0U1 55 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 KLK5Q9Y337 293 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 CREBBPQ92793 2442 aa2.4□□□□□ -2.03
HMGB3P18-201ENST00000406327 H3BPC8 53 aa2.39□□□□□ -2.03
HMGB3P18-201ENST00000406327 LST1O00453 97 aa2.39□□□□□ -2.03
HMGB3P18-201ENST00000406327 XCL1P47992 114 aa2.39□□□□□ -2.03
HMGB3P18-201ENST00000406327 LINC00158P58513 81 aa2.39□□□□□ -2.03
HMGB3P18-201ENST00000406327 LINC00269Q8N2A0 174 aa2.39□□□□□ -2.03
HMGB3P18-201ENST00000406327 SIGMAR1Q99720 223 aa2.39□□□□□ -2.03
HMGB3P18-201ENST00000406327 ZFHX3Q15911 3703 aa2.39□□□□□ -2.03
HMGB3P18-201ENST00000406327 CHD6Q8TD26 2715 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 TRAV13-2A0A0B4J235 113 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 H3BT86 120 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 COX7A2LO14548 114 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 HTN3P15516 51 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 CCL18P55774 89 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 LELP1Q5T871 98 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 C2orf82Q6UX34 121 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 Q8IZM0 81 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 CLEC2BQ92478 149 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 UNC79Q9P2D8 2635 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
HMGB3P18-201ENST00000406327 SORL1Q92673 2214 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 OTOGQ6ZRI0 2925 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 FLNAP21333 2647 aaKnown RBP2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 H3BNG1 76 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 TRACP01848 142 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 SCGB1A1P11684 91 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 RPL28P46779 137 aaKnown RBP2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 CKS1BP61024 79 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 COX17Q14061 63 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 CLPSL2Q6UWE3 100 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 LYPD5Q6UWN5 251 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 C3orf56Q8N813 242 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 HIVEP2P31629 2446 aa2.37□□□□□ -2.03
HMGB3P18-201ENST00000406327 TEX49A0A1B0GTD5 131 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 H0YGX0 51 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 CRPP02741 224 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 FAM229BQ4G0N7 80 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 DEFB121Q5J5C9 76 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 ENHOQ6UWT2 76 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 SMIM11BQ8TCY0 68 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 C20orf166-AS1Q96NR2 134 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 C11orf68Q9H3H3 251 aaKnown RBP2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 CCDC168Q8NDH2 2452 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 NF1P21359 2839 aa2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 NIPBLQ6KC79 2804 aaeCLIP2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 SONP18583 2426 aaKnown RBP2.36□□□□□ -2.03
HMGB3P18-201ENST00000406327 ITPR2Q14571 2701 aa2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 ZNF73O43830 326 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 NDUFC2O95298 119 aa2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 MT-ATP8P03928 68 aa2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 BAALC-AS2P0C853 105 aa2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 PMAIP1Q13794 54 aa2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 OR13C6PQ8NH95 151 aa2.35□□□□□ -2.03
HMGB3P18-201ENST00000406327 MYO9AB2RTY4 2548 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 FASNP49327 2511 aaKnown RBP2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 HELZ2Q9BYK8 2649 aaKnown RBP2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 WNK1Q9H4A3 2382 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 SPAG11BQ08648 103 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 ESRGQ1W209 222 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms