RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 ABCA13Q86UQ4 5058 aa13.73□□□□□ -0.21
EPCAM-202ENST00000405271 H7C2G1 150 aa13.73□□□□□ -0.21
EPCAM-202ENST00000405271 KCNQ1DNQ9H478 68 aa13.73□□□□□ -0.21
EPCAM-202ENST00000405271 TSPAN13O95857 204 aa13.72□□□□□ -0.21
EPCAM-202ENST00000405271 SMIM11BQ8TCY0 68 aa13.71□□□□□ -0.21
EPCAM-202ENST00000405271 RPL28P46779 137 aaKnown RBP13.7□□□□□ -0.22
EPCAM-202ENST00000405271 HAMPP81172 84 aa13.69□□□□□ -0.22
EPCAM-202ENST00000405271 TAX1BP3O14907 124 aa13.68□□□□□ -0.22
EPCAM-202ENST00000405271 DIRC1Q969H9 104 aa13.68□□□□□ -0.22
EPCAM-202ENST00000405271 ZNF73O43830 326 aaPredicted RBP13.67□□□□□ -0.22
EPCAM-202ENST00000405271 REG3GQ6UW15 175 aa13.67□□□□□ -0.22
EPCAM-202ENST00000405271 SPRR1AP35321 89 aa13.66□□□□□ -0.22
EPCAM-202ENST00000405271 KRTAP11-1Q8IUC1 163 aa13.66□□□□□ -0.22
EPCAM-202ENST00000405271 C6orf99Q4VX62 202 aa13.65□□□□□ -0.22
EPCAM-202ENST00000405271 FAT1Q14517 4588 aa13.65□□□□□ -0.22
EPCAM-202ENST00000405271 PSMB2P49721 201 aa13.64□□□□□ -0.23
EPCAM-202ENST00000405271 C9orf118A6NHY6 69 aa13.64□□□□□ -0.23
EPCAM-202ENST00000405271 TRIAP1O43715 76 aa13.63□□□□□ -0.23
EPCAM-202ENST00000405271 TRBV7-6A0A0J9YX20 115 aa13.62□□□□□ -0.23
EPCAM-202ENST00000405271 COX6CP09669 75 aa13.61□□□□□ -0.23
EPCAM-202ENST00000405271 ETDCA0A1B0GVM5 59 aa13.6□□□□□ -0.23
EPCAM-202ENST00000405271 KRTAP4-16G5E9R7 235 aaPredicted RBP13.6□□□□□ -0.23
EPCAM-202ENST00000405271 H3BUT2 72 aa13.6□□□□□ -0.23
EPCAM-202ENST00000405271 SMR3BP02814 79 aaPredicted RBP13.6□□□□□ -0.23
EPCAM-202ENST00000405271 VAMP3Q15836 100 aa13.6□□□□□ -0.23
EPCAM-202ENST00000405271 PSORS1C2Q9UIG4 136 aa13.6□□□□□ -0.23
EPCAM-202ENST00000405271 NAA38Q9BRA0 125 aaKnown RBP13.59□□□□□ -0.23
EPCAM-202ENST00000405271 LYRM7Q5U5X0 104 aa13.59□□□□□ -0.23
EPCAM-202ENST00000405271 BCE1O60756 84 aa13.58□□□□□ -0.24
EPCAM-202ENST00000405271 ELOF1P60002 83 aaKnown RBP13.58□□□□□ -0.24
EPCAM-202ENST00000405271 H0YGX0 51 aa13.57□□□□□ -0.24
EPCAM-202ENST00000405271 COX7BP24311 80 aa13.57□□□□□ -0.24
EPCAM-202ENST00000405271 FAM19A1Q7Z5A9 133 aa13.56□□□□□ -0.24
EPCAM-202ENST00000405271 B5MCH6 92 aa13.55□□□□□ -0.24
EPCAM-202ENST00000405271 Q6ZRX8 168 aa13.55□□□□□ -0.24
EPCAM-202ENST00000405271 C1orf137Q5JT78 98 aa13.54□□□□□ -0.24
EPCAM-202ENST00000405271 SRRM2Q9UQ35 2752 aaKnown RBP13.54□□□□□ -0.24
EPCAM-202ENST00000405271 A0A1W2PPM0 123 aa13.54□□□□□ -0.24
EPCAM-202ENST00000405271 SCGB1C2P0DMR2 95 aa13.54□□□□□ -0.24
EPCAM-202ENST00000405271 Q5VSD8 79 aa13.54□□□□□ -0.24
EPCAM-202ENST00000405271 LINC00528Q8N1L1 170 aa13.54□□□□□ -0.24
EPCAM-202ENST00000405271 H0Y9J4 135 aa13.53□□□□□ -0.24
EPCAM-202ENST00000405271 FABP2P12104 132 aa13.51□□□□□ -0.25
EPCAM-202ENST00000405271 UBE2AP49459 152 aa13.51□□□□□ -0.25
EPCAM-202ENST00000405271 PRLHP81277 87 aa13.5□□□□□ -0.25
EPCAM-202ENST00000405271 FAM229AH3BQW9 127 aa13.49□□□□□ -0.25
EPCAM-202ENST00000405271 KRTAP13-1Q8IUC0 172 aa13.49□□□□□ -0.25
EPCAM-202ENST00000405271 RPL37AP61513 92 aaKnown RBP13.49□□□□□ -0.25
EPCAM-202ENST00000405271 LINC00575Q6W349 94 aa13.49□□□□□ -0.25
EPCAM-202ENST00000405271 SLC25A20O43772 301 aa13.48□□□□□ -0.25
EPCAM-202ENST00000405271 IGLV7-43P04211 117 aa13.48□□□□□ -0.25
EPCAM-202ENST00000405271 INAFM2P0DMQ5 153 aa13.48□□□□□ -0.25
EPCAM-202ENST00000405271 CLEC2BQ92478 149 aa13.48□□□□□ -0.25
EPCAM-202ENST00000405271 DHRS4-AS1Q9P1J3 65 aa13.48□□□□□ -0.25
EPCAM-202ENST00000405271 A0A1B0GX51 115 aa13.47□□□□□ -0.25
EPCAM-202ENST00000405271 TRBV20-1A0A075B6N2 111 aa13.46□□□□□ -0.25
EPCAM-202ENST00000405271 SNCGO76070 127 aa13.46□□□□□ -0.25
EPCAM-202ENST00000405271 FAM218AQ96MZ4 157 aa13.46□□□□□ -0.25
EPCAM-202ENST00000405271 Q9BRP9 147 aa13.46□□□□□ -0.25
EPCAM-202ENST00000405271 VPS13BQ7Z7G8 4022 aa13.46□□□□□ -0.26
EPCAM-202ENST00000405271 LST1O00453 97 aa13.44□□□□□ -0.26
EPCAM-202ENST00000405271 TCL1BO95988 128 aa13.44□□□□□ -0.26
EPCAM-202ENST00000405271 hADV29S1A0JD25 119 aa13.44□□□□□ -0.26
EPCAM-202ENST00000405271 ZNF861PO60384 105 aa13.44□□□□□ -0.26
EPCAM-202ENST00000405271 ATXN8Q156A1 80 aa13.44□□□□□ -0.26
EPCAM-202ENST00000405271 SMCR5Q8TEV8 140 aa13.44□□□□□ -0.26
EPCAM-202ENST00000405271 HIGD2AQ9BW72 106 aa13.43□□□□□ -0.26
EPCAM-202ENST00000405271 SPCS1Q9Y6A9 102 aa13.43□□□□□ -0.26
EPCAM-202ENST00000405271 TRACP01848 142 aa13.41□□□□□ -0.26
EPCAM-202ENST00000405271 DNAL4O96015 105 aa13.39□□□□□ -0.27
EPCAM-202ENST00000405271 PLA2G1BP04054 148 aaKnown RBP13.39□□□□□ -0.27
EPCAM-202ENST00000405271 K7EP34 96 aa13.38□□□□□ -0.27
EPCAM-202ENST00000405271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.37□□□□□ -0.27
EPCAM-202ENST00000405271 FLG2Q5D862 2391 aaPredicted RBP13.36□□□□□ -0.27
EPCAM-202ENST00000405271 KRTAP10-4P60372 401 aaPredicted RBP13.36□□□□□ -0.27
EPCAM-202ENST00000405271 ERC2-IT1O76042 136 aa13.35□□□□□ -0.27
EPCAM-202ENST00000405271 GTF2H5Q6ZYL4 71 aa13.35□□□□□ -0.27
EPCAM-202ENST00000405271 MYCBP2O75592 4640 aa13.35□□□□□ -0.27
EPCAM-202ENST00000405271 Q6ZQY7 126 aa13.34□□□□□ -0.27
EPCAM-202ENST00000405271 A0A1B0GV90 55 aa13.33□□□□□ -0.28
EPCAM-202ENST00000405271 OCIAD2Q56VL3 154 aa13.32□□□□□ -0.28
EPCAM-202ENST00000405271 H3BMG7 143 aa13.31□□□□□ -0.28
EPCAM-202ENST00000405271 ZNF706Q9Y5V0 76 aaPredicted RBP13.31□□□□□ -0.28
EPCAM-202ENST00000405271 GHRHP01286 108 aa13.3□□□□□ -0.28
EPCAM-202ENST00000405271 SPINK6Q6UWN8 80 aa13.3□□□□□ -0.28
EPCAM-202ENST00000405271 ORMDL1Q9P0S3 153 aa13.29□□□□□ -0.28
EPCAM-202ENST00000405271 IGLV5-48A0A075B6I7 105 aa13.28□□□□□ -0.28
EPCAM-202ENST00000405271 H3BQ85 93 aa13.28□□□□□ -0.28
EPCAM-202ENST00000405271 ST20-AS1Q8NBB2 130 aa13.28□□□□□ -0.28
EPCAM-202ENST00000405271 C9JAW5 83 aa13.27□□□□□ -0.29
EPCAM-202ENST00000405271 PPDPFLQ8WWR9 84 aa13.27□□□□□ -0.29
EPCAM-202ENST00000405271 SPRR4Q96PI1 79 aa13.26□□□□□ -0.29
EPCAM-202ENST00000405271 DMBT1Q9UGM3 2413 aaPredicted RBP13.25□□□□□ -0.29
EPCAM-202ENST00000405271 LINC01547P58512 204 aaPredicted RBP13.24□□□□□ -0.29
EPCAM-202ENST00000405271 TEX49A0A1B0GTD5 131 aa13.23□□□□□ -0.29
EPCAM-202ENST00000405271 SPRR1BP22528 89 aa13.23□□□□□ -0.29
EPCAM-202ENST00000405271 DEFB105AQ8NG35 78 aa13.23□□□□□ -0.29
EPCAM-202ENST00000405271 HERC1Q15751 4861 aa13.22□□□□□ -0.29
EPCAM-202ENST00000405271 H3BT86 120 aa13.21□□□□□ -0.29
EPCAM-202ENST00000405271 TMEM256-PLSCR3K7ERE1 68 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms