RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PPDPFQ9H3Y8 114 aa11.36□□□□□ -0.59
RTN4-207ENST00000402434 B5MCH6 92 aa11.35□□□□□ -0.59
RTN4-207ENST00000402434 SCGB1D1O95968 90 aa11.34□□□□□ -0.59
RTN4-207ENST00000402434 IFITM1P13164 125 aa11.34□□□□□ -0.59
RTN4-207ENST00000402434 TRAV23DV6A0A075B6W5 121 aa11.33□□□□□ -0.6
RTN4-207ENST00000402434 LINC00518Q8N0U6 118 aa11.33□□□□□ -0.6
RTN4-207ENST00000402434 COPS9Q8WXC6 57 aa11.32□□□□□ -0.6
RTN4-207ENST00000402434 CBY1Q9Y3M2 126 aa11.32□□□□□ -0.6
RTN4-207ENST00000402434 KRTAP13-2Q52LG2 175 aa11.32□□□□□ -0.6
RTN4-207ENST00000402434 Q6ZRX8 168 aa11.32□□□□□ -0.6
RTN4-207ENST00000402434 SMCR5Q8TEV8 140 aa11.32□□□□□ -0.6
RTN4-207ENST00000402434 SPRR4Q96PI1 79 aa11.32□□□□□ -0.6
RTN4-207ENST00000402434 ZNF73O43830 326 aaPredicted RBP11.31□□□□□ -0.6
RTN4-207ENST00000402434 TYMSOSQ8TAI1 123 aa11.3□□□□□ -0.6
RTN4-207ENST00000402434 MUSTN1Q8IVN3 82 aa11.29□□□□□ -0.6
RTN4-207ENST00000402434 OR13C6PQ8NH95 151 aa11.29□□□□□ -0.6
RTN4-207ENST00000402434 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
RTN4-207ENST00000402434 Q9BRP9 147 aa11.28□□□□□ -0.6
RTN4-207ENST00000402434 ERC2-IT1O76042 136 aa11.25□□□□□ -0.61
RTN4-207ENST00000402434 JOSD1Q15040 202 aaPredicted RBP11.25□□□□□ -0.61
RTN4-207ENST00000402434 TMA7Q9Y2S6 64 aaKnown RBP11.25□□□□□ -0.61
RTN4-207ENST00000402434 HINT1P49773 126 aaPredicted RBP11.24□□□□□ -0.61
RTN4-207ENST00000402434 COX8AP10176 69 aa11.22□□□□□ -0.61
RTN4-207ENST00000402434 LINC00483Q53H64 154 aa11.22□□□□□ -0.61
RTN4-207ENST00000402434 C3orf22Q8N5N4 141 aa11.21□□□□□ -0.61
RTN4-207ENST00000402434 DLEU1O43261 78 aa11.2□□□□□ -0.62
RTN4-207ENST00000402434 C6orf99Q4VX62 202 aa11.19□□□□□ -0.62
RTN4-207ENST00000402434 GAGE2AQ6NT46 116 aa11.19□□□□□ -0.62
RTN4-207ENST00000402434 TRAV13-2A0A0B4J235 113 aa11.18□□□□□ -0.62
RTN4-207ENST00000402434 A6NDN8 102 aa11.18□□□□□ -0.62
RTN4-207ENST00000402434 LINC00304Q8N9R0 145 aa11.18□□□□□ -0.62
RTN4-207ENST00000402434 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
RTN4-207ENST00000402434 ELOF1P60002 83 aaKnown RBP11.17□□□□□ -0.62
RTN4-207ENST00000402434 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
RTN4-207ENST00000402434 PAM16Q9Y3D7 125 aa11.17□□□□□ -0.62
RTN4-207ENST00000402434 TSPAN13O95857 204 aa11.16□□□□□ -0.62
RTN4-207ENST00000402434 SPATA45Q537H7 98 aa11.16□□□□□ -0.62
RTN4-207ENST00000402434 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
RTN4-207ENST00000402434 COX7BP24311 80 aa11.15□□□□□ -0.62
RTN4-207ENST00000402434 CTAG1AP78358 180 aa11.15□□□□□ -0.62
RTN4-207ENST00000402434 C14orf144Q96I85 54 aa11.15□□□□□ -0.62
RTN4-207ENST00000402434 A4D1N5 150 aa11.14□□□□□ -0.63
RTN4-207ENST00000402434 ST20-AS1Q8NBB2 130 aa11.12□□□□□ -0.63
RTN4-207ENST00000402434 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
RTN4-207ENST00000402434 UBR4Q5T4S7 5183 aa11.11□□□□□ -0.63
RTN4-207ENST00000402434 A0A1B0GWB2 263 aa11.11□□□□□ -0.63
RTN4-207ENST00000402434 PYY3Q5JQD4 70 aa11.11□□□□□ -0.63
RTN4-207ENST00000402434 SMIM11BQ8TCY0 68 aa11.11□□□□□ -0.63
RTN4-207ENST00000402434 HIGD1BQ9P298 99 aa11.11□□□□□ -0.63
RTN4-207ENST00000402434 SPAG11AQ6PDA7 123 aa11.1□□□□□ -0.63
RTN4-207ENST00000402434 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
RTN4-207ENST00000402434 SPRR1BP22528 89 aa11.08□□□□□ -0.64
RTN4-207ENST00000402434 LRP2P98164 4655 aa11.08□□□□□ -0.64
RTN4-207ENST00000402434 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
RTN4-207ENST00000402434 Q8NBF4 154 aa11.07□□□□□ -0.64
RTN4-207ENST00000402434 IGLV9-49A0A0B4J1Y8 123 aa11.06□□□□□ -0.64
RTN4-207ENST00000402434 PRR4Q16378 134 aa11.06□□□□□ -0.64
RTN4-207ENST00000402434 C2orf91Q6ZV80 131 aa11.06□□□□□ -0.64
RTN4-207ENST00000402434 MOBPQ13875 183 aa11.06□□□□□ -0.64
RTN4-207ENST00000402434 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
RTN4-207ENST00000402434 C12orf57Q99622 126 aa11.03□□□□□ -0.64
RTN4-207ENST00000402434 SPINK1P00995 79 aa11.01□□□□□ -0.65
RTN4-207ENST00000402434 VAMP3Q15836 100 aa11.01□□□□□ -0.65
RTN4-207ENST00000402434 CFC1BP0CG36 223 aa11□□□□□ -0.65
RTN4-207ENST00000402434 CFC1P0CG37 223 aa11□□□□□ -0.65
RTN4-207ENST00000402434 TAL2Q16559 108 aa11□□□□□ -0.65
RTN4-207ENST00000402434 NHP2Q9NX24 153 aaKnown RBP11□□□□□ -0.65
RTN4-207ENST00000402434 IGLV5-48A0A075B6I7 105 aa10.99□□□□□ -0.65
RTN4-207ENST00000402434 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
RTN4-207ENST00000402434 C9orf153Q5TBE3 101 aa10.99□□□□□ -0.65
RTN4-207ENST00000402434 RETNLBQ9BQ08 111 aa10.99□□□□□ -0.65
RTN4-207ENST00000402434 LINC01547P58512 204 aaPredicted RBP10.98□□□□□ -0.65
RTN4-207ENST00000402434 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
RTN4-207ENST00000402434 LINC00575Q6W349 94 aa10.97□□□□□ -0.65
RTN4-207ENST00000402434 CEND1Q8N111 149 aa10.97□□□□□ -0.65
RTN4-207ENST00000402434 LAMTOR3Q9UHA4 124 aa10.97□□□□□ -0.65
RTN4-207ENST00000402434 LOC105371267A0A1B0GV96 52 aa10.96□□□□□ -0.65
RTN4-207ENST00000402434 RPS29P62273 56 aaKnown RBP10.96□□□□□ -0.65
RTN4-207ENST00000402434 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
RTN4-207ENST00000402434 SLC25A20O43772 301 aa10.95□□□□□ -0.66
RTN4-207ENST00000402434 SMIM29Q86T20 159 aa10.94□□□□□ -0.66
RTN4-207ENST00000402434 LPAP08519 4548 aa10.94□□□□□ -0.66
RTN4-207ENST00000402434 BVES-AS1Q5T3Y7 98 aa10.93□□□□□ -0.66
RTN4-207ENST00000402434 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
RTN4-207ENST00000402434 Q1RN00 199 aa10.93□□□□□ -0.66
RTN4-207ENST00000402434 TMEM238LA0A1B0GVL6 79 aa10.92□□□□□ -0.66
RTN4-207ENST00000402434 A6NJY4 79 aa10.92□□□□□ -0.66
RTN4-207ENST00000402434 Q8N377 158 aa10.92□□□□□ -0.66
RTN4-207ENST00000402434 hADV29S1A0JD25 119 aa10.91□□□□□ -0.66
RTN4-207ENST00000402434 H7C2G1 150 aa10.9□□□□□ -0.66
RTN4-207ENST00000402434 FXYD2P54710 66 aa10.9□□□□□ -0.66
RTN4-207ENST00000402434 IGLV7-46A0A075B6I9 117 aa10.89□□□□□ -0.67
RTN4-207ENST00000402434 HSD52Q0P140 79 aa10.88□□□□□ -0.67
RTN4-207ENST00000402434 FP248Q71RG6 208 aaPredicted RBP10.88□□□□□ -0.67
RTN4-207ENST00000402434 UQCR10Q9UDW1 63 aa10.88□□□□□ -0.67
RTN4-207ENST00000402434 PRO1854Q9UHT4 67 aa10.88□□□□□ -0.67
RTN4-207ENST00000402434 Q6ZQY7 126 aa10.87□□□□□ -0.67
RTN4-207ENST00000402434 TPRXLQ17RH7 258 aa10.87□□□□□ -0.67
RTN4-207ENST00000402434 PRO1933Q9H354 126 aa10.86□□□□□ -0.67
RTN4-207ENST00000402434 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms