RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
SKA3-203ENST00000400018 Q6ZR54 194 aa7.61□□□□□ -1.19
SKA3-203ENST00000400018 CHTF8P0CG12 524 aa7.61□□□□□ -1.19
SKA3-203ENST00000400018 IGKV2-24A0A0C4DH68 120 aa7.6□□□□□ -1.19
SKA3-203ENST00000400018 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
SKA3-203ENST00000400018 SEC61GP60059 68 aa7.6□□□□□ -1.19
SKA3-203ENST00000400018 LRCOL1A6NCL2 159 aa7.6□□□□□ -1.19
SKA3-203ENST00000400018 C3orf84H3BNL1 204 aa7.6□□□□□ -1.19
SKA3-203ENST00000400018 RPL18AQ02543 176 aaKnown RBP7.6□□□□□ -1.19
SKA3-203ENST00000400018 Q6ZRP5 223 aa7.6□□□□□ -1.19
SKA3-203ENST00000400018 A0A087WVE0 104 aa7.59□□□□□ -1.19
SKA3-203ENST00000400018 PKD1P98161 4303 aa7.59□□□□□ -1.19
SKA3-203ENST00000400018 SERP2Q8N6R1 65 aa7.59□□□□□ -1.19
SKA3-203ENST00000400018 LINC00308Q8TCZ7 52 aa7.59□□□□□ -1.19
SKA3-203ENST00000400018 SYCNQ0VAF6 134 aa7.58□□□□□ -1.2
SKA3-203ENST00000400018 IGKV3D-7A0A0C4DH55 119 aa7.58□□□□□ -1.2
SKA3-203ENST00000400018 PANO1I0J062 215 aa7.58□□□□□ -1.2
SKA3-203ENST00000400018 RTL8CO15255 209 aa7.58□□□□□ -1.2
SKA3-203ENST00000400018 NCR3O14931 201 aa7.57□□□□□ -1.2
SKA3-203ENST00000400018 C1orf134Q5TEV5 83 aa7.57□□□□□ -1.2
SKA3-203ENST00000400018 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
SKA3-203ENST00000400018 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
SKA3-203ENST00000400018 FAM236DA0A1B0GTK5 79 aa7.56□□□□□ -1.2
SKA3-203ENST00000400018 FAM236CP0DP71 79 aa7.56□□□□□ -1.2
SKA3-203ENST00000400018 KRTAP10-2P60368 255 aa7.56□□□□□ -1.2
SKA3-203ENST00000400018 RMI2Q96E14 147 aa7.55□□□□□ -1.2
SKA3-203ENST00000400018 A0A087WTM6 91 aa7.55□□□□□ -1.2
SKA3-203ENST00000400018 CIRBPQ14011 172 aaKnown RBP7.54□□□□□ -1.2
SKA3-203ENST00000400018 IGKV2-28A0A075B6P5 120 aa7.54□□□□□ -1.2
SKA3-203ENST00000400018 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
SKA3-203ENST00000400018 IGKV2D-28P01615 120 aa7.54□□□□□ -1.2
SKA3-203ENST00000400018 C9orf129Q5T035 196 aaKnown RBP7.54□□□□□ -1.2
SKA3-203ENST00000400018 BAALC-AS2P0C853 105 aa7.53□□□□□ -1.2
SKA3-203ENST00000400018 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
SKA3-203ENST00000400018 SERTAD4-AS1Q5TG53 156 aa7.53□□□□□ -1.2
SKA3-203ENST00000400018 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
SKA3-203ENST00000400018 C22orf24Q9Y442 160 aa7.53□□□□□ -1.2
SKA3-203ENST00000400018 A0A096LNI7 61 aa7.52□□□□□ -1.21
SKA3-203ENST00000400018 LINC00337Q8N6G1 96 aa7.52□□□□□ -1.21
SKA3-203ENST00000400018 V9GYY9 64 aa7.52□□□□□ -1.21
SKA3-203ENST00000400018 KRTAP7-1Q8IUC3 87 aa7.51□□□□□ -1.21
SKA3-203ENST00000400018 Q8N814 137 aa7.51□□□□□ -1.21
SKA3-203ENST00000400018 RPL37AP8A6NKH3 93 aa7.5□□□□□ -1.21
SKA3-203ENST00000400018 LCE6AA0A183 80 aa7.49□□□□□ -1.21
SKA3-203ENST00000400018 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
SKA3-203ENST00000400018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
SKA3-203ENST00000400018 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
SKA3-203ENST00000400018 C1orf195Q5TG92 126 aa7.48□□□□□ -1.21
SKA3-203ENST00000400018 LINC00846Q9NV44 126 aa7.48□□□□□ -1.21
SKA3-203ENST00000400018 C20orf197Q8N268 126 aa7.48□□□□□ -1.21
SKA3-203ENST00000400018 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
SKA3-203ENST00000400018 LRP1BQ9NZR2 4599 aa7.48□□□□□ -1.21
SKA3-203ENST00000400018 TIMM17BO60830 172 aa7.47□□□□□ -1.21
SKA3-203ENST00000400018 INAFM2P0DMQ5 153 aa7.47□□□□□ -1.21
SKA3-203ENST00000400018 BRK1Q8WUW1 75 aa7.47□□□□□ -1.21
SKA3-203ENST00000400018 DNAL4O96015 105 aa7.47□□□□□ -1.21
SKA3-203ENST00000400018 C14orf132Q9NPU4 83 aa7.47□□□□□ -1.21
SKA3-203ENST00000400018 FAM30AQ9NZY2 134 aa7.46□□□□□ -1.21
SKA3-203ENST00000400018 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
SKA3-203ENST00000400018 DYNC1H1Q14204 4646 aaKnown RBP7.46□□□□□ -1.22
SKA3-203ENST00000400018 EPPK1P58107 5090 aaKnown RBP7.46□□□□□ -1.22
SKA3-203ENST00000400018 NDUFC2O95298 119 aa7.45□□□□□ -1.22
SKA3-203ENST00000400018 GHRHP01286 108 aa7.45□□□□□ -1.22
SKA3-203ENST00000400018 Q6JHZ5 121 aa7.45□□□□□ -1.22
SKA3-203ENST00000400018 KRTAP11-1Q8IUC1 163 aa7.45□□□□□ -1.22
SKA3-203ENST00000400018 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
SKA3-203ENST00000400018 IGLV5-52A0A0A0MRZ9 124 aa7.44□□□□□ -1.22
SKA3-203ENST00000400018 SERP1Q9Y6X1 66 aa7.44□□□□□ -1.22
SKA3-203ENST00000400018 EPM2AB3EWF7 344 aa7.43□□□□□ -1.22
SKA3-203ENST00000400018 TRBV10-3A0A0K0K1G6 114 aa7.43□□□□□ -1.22
SKA3-203ENST00000400018 VPREB1P12018 145 aa7.43□□□□□ -1.22
SKA3-203ENST00000400018 COX17Q14061 63 aa7.43□□□□□ -1.22
SKA3-203ENST00000400018 PHF5AQ7RTV0 110 aaKnown RBP7.43□□□□□ -1.22
SKA3-203ENST00000400018 C9orf163Q8N9P6 203 aa7.43□□□□□ -1.22
SKA3-203ENST00000400018 LINC00474Q9P2X8 69 aa7.43□□□□□ -1.22
SKA3-203ENST00000400018 RPL28P46779 137 aaKnown RBP7.43□□□□□ -1.22
SKA3-203ENST00000400018 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
SKA3-203ENST00000400018 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
SKA3-203ENST00000400018 H7BZZ5 65 aa7.41□□□□□ -1.22
SKA3-203ENST00000400018 KRTAP10-1P60331 282 aa7.4□□□□□ -1.22
SKA3-203ENST00000400018 S100A7L2Q5SY68 101 aa7.4□□□□□ -1.22
SKA3-203ENST00000400018 FAT1Q14517 4588 aa7.4□□□□□ -1.22
SKA3-203ENST00000400018 C7orf33Q8WU49 177 aa7.4□□□□□ -1.23
SKA3-203ENST00000400018 SMIM26A0A096LP01 95 aa7.39□□□□□ -1.23
SKA3-203ENST00000400018 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
SKA3-203ENST00000400018 LINC00167Q96N53 147 aa7.38□□□□□ -1.23
SKA3-203ENST00000400018 A0A087WYN8 130 aa7.38□□□□□ -1.23
SKA3-203ENST00000400018 C14orf177Q52M58 125 aa7.38□□□□□ -1.23
SKA3-203ENST00000400018 NKAPP1Q8N9T2 125 aa7.38□□□□□ -1.23
SKA3-203ENST00000400018 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
SKA3-203ENST00000400018 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
SKA3-203ENST00000400018 SNURFQ9Y675 71 aa7.36□□□□□ -1.23
SKA3-203ENST00000400018 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
SKA3-203ENST00000400018 VPS13BQ7Z7G8 4022 aa7.36□□□□□ -1.23
SKA3-203ENST00000400018 RBM3P98179 157 aaKnown RBP7.35□□□□□ -1.23
SKA3-203ENST00000400018 F8WEM9 126 aa7.34□□□□□ -1.23
SKA3-203ENST00000400018 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.23
SKA3-203ENST00000400018 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
SKA3-203ENST00000400018 CCKP06307 115 aa7.33□□□□□ -1.24
SKA3-203ENST00000400018 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms