RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 PFN2P35080 140 aa4.39□□□□□ -1.71
USP16-203ENST00000399975 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
USP16-203ENST00000399975 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
USP16-203ENST00000399975 SOSTDC1Q6X4U4 206 aa4.38□□□□□ -1.71
USP16-203ENST00000399975 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
USP16-203ENST00000399975 H7C2G1 150 aa4.38□□□□□ -1.71
USP16-203ENST00000399975 KRTAP10-2P60368 255 aa4.38□□□□□ -1.71
USP16-203ENST00000399975 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
USP16-203ENST00000399975 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
USP16-203ENST00000399975 TRAV13-2A0A0B4J235 113 aa4.37□□□□□ -1.71
USP16-203ENST00000399975 CRYGAP11844 174 aa4.37□□□□□ -1.71
USP16-203ENST00000399975 SPACA4Q8TDM5 124 aa4.37□□□□□ -1.71
USP16-203ENST00000399975 KMT2CQ8NEZ4 4911 aaKnown RBP4.37□□□□□ -1.71
USP16-203ENST00000399975 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
USP16-203ENST00000399975 A0A096LNI7 61 aa4.36□□□□□ -1.71
USP16-203ENST00000399975 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
USP16-203ENST00000399975 Q6ZSA8 131 aa4.36□□□□□ -1.71
USP16-203ENST00000399975 VPREB1P12018 145 aa4.36□□□□□ -1.71
USP16-203ENST00000399975 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
USP16-203ENST00000399975 H0YGX0 51 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 ATOX1O00244 68 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 BAALC-AS2P0C853 105 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 COX7CP15954 63 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 Q6JHZ5 121 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 LINC00167Q96N53 147 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 PLAC8Q9NZF1 115 aa4.35□□□□□ -1.71
USP16-203ENST00000399975 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.71
USP16-203ENST00000399975 Q8NDZ9 215 aa4.34□□□□□ -1.71
USP16-203ENST00000399975 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.72
USP16-203ENST00000399975 IGKV2-28A0A075B6P5 120 aa4.34□□□□□ -1.72
USP16-203ENST00000399975 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.72
USP16-203ENST00000399975 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.72
USP16-203ENST00000399975 M0R378 163 aa4.34□□□□□ -1.72
USP16-203ENST00000399975 IGKV2D-28P01615 120 aa4.34□□□□□ -1.72
USP16-203ENST00000399975 XAGE1AQ9HD64 81 aa4.33□□□□□ -1.72
USP16-203ENST00000399975 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
USP16-203ENST00000399975 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
USP16-203ENST00000399975 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
USP16-203ENST00000399975 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
USP16-203ENST00000399975 BCE1O60756 84 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 IGLV6-57P01721 117 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 NPC2P61916 151 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 A0A1W2PNN7 141 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 PANO1I0J062 215 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 RYR3Q15413 4870 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
USP16-203ENST00000399975 FAM168BA1KXE4 195 aa4.31□□□□□ -1.72
USP16-203ENST00000399975 CHTF8P0CG12 524 aa4.31□□□□□ -1.72
USP16-203ENST00000399975 LINC00337Q8N6G1 96 aa4.31□□□□□ -1.72
USP16-203ENST00000399975 TRBV10-3A0A0K0K1G6 114 aa4.31□□□□□ -1.72
USP16-203ENST00000399975 FUSP35637 526 aaKnown RBP eCLIP4.31□□□□□ -1.72
USP16-203ENST00000399975 C9orf153Q5TBE3 101 aa4.31□□□□□ -1.72
USP16-203ENST00000399975 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
USP16-203ENST00000399975 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 J3KT08 172 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 MRPL55Q7Z7F7 128 aaKnown RBP4.3□□□□□ -1.72
USP16-203ENST00000399975 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 KCNQ1DNQ9H478 68 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 IGLV1-50A0A075B6I6 118 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 A0A087WYN8 130 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 TMEM258P61165 79 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 S100A7L2Q5SY68 101 aa4.3□□□□□ -1.72
USP16-203ENST00000399975 TRBV7-6A0A0J9YX20 115 aa4.29□□□□□ -1.72
USP16-203ENST00000399975 PRYO14603 147 aa4.29□□□□□ -1.72
USP16-203ENST00000399975 NCR3O14931 201 aa4.29□□□□□ -1.72
USP16-203ENST00000399975 SERP2Q8N6R1 65 aa4.29□□□□□ -1.72
USP16-203ENST00000399975 FAM30AQ9NZY2 134 aa4.29□□□□□ -1.72
USP16-203ENST00000399975 PRR3P79522 188 aaKnown RBP4.29□□□□□ -1.72
USP16-203ENST00000399975 FAM19A5Q7Z5A7 132 aaPredicted RBP4.29□□□□□ -1.72
USP16-203ENST00000399975 SPRR1AP35321 89 aa4.29□□□□□ -1.72
USP16-203ENST00000399975 SMIM11BQ8TCY0 68 aa4.29□□□□□ -1.72
USP16-203ENST00000399975 JMJD7-PLA2G4BH0Y9G9 81 aa4.28□□□□□ -1.72
USP16-203ENST00000399975 CCKP06307 115 aa4.28□□□□□ -1.72
USP16-203ENST00000399975 H3BQ85 93 aa4.27□□□□□ -1.73
USP16-203ENST00000399975 DNAL4O96015 105 aa4.27□□□□□ -1.73
USP16-203ENST00000399975 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
USP16-203ENST00000399975 TRAV23DV6A0A075B6W5 121 aa4.27□□□□□ -1.73
USP16-203ENST00000399975 KRTAP4-16G5E9R7 235 aaPredicted RBP4.27□□□□□ -1.73
USP16-203ENST00000399975 SCXQ7RTU7 201 aa4.27□□□□□ -1.73
USP16-203ENST00000399975 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
USP16-203ENST00000399975 LRP1BQ9NZR2 4599 aa4.27□□□□□ -1.73
USP16-203ENST00000399975 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 H0Y9J4 135 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 C5orf47Q569G3 176 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 OR13C6PQ8NH95 151 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 DPH3Q96FX2 82 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 LINC00846Q9NV44 126 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 ORMDL1Q9P0S3 153 aa4.26□□□□□ -1.73
USP16-203ENST00000399975 REG3GQ6UW15 175 aa4.25□□□□□ -1.73
USP16-203ENST00000399975 TMEM256-PLSCR3K7ERE1 68 aa4.25□□□□□ -1.73
USP16-203ENST00000399975 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
USP16-203ENST00000399975 KRTAP11-1Q8IUC1 163 aa4.25□□□□□ -1.73
USP16-203ENST00000399975 DIRC1Q969H9 104 aa4.25□□□□□ -1.73
USP16-203ENST00000399975 LOC110117498A0A087WWA1 95 aa4.24□□□□□ -1.73
USP16-203ENST00000399975 hADV29S1A0JD25 119 aa4.24□□□□□ -1.73
USP16-203ENST00000399975 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
USP16-203ENST00000399975 ELOF1P60002 83 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms