RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ZNF73O43830 326 aaPredicted RBP11.49□□□□□ -0.57
PTPRA-205ENST00000399903 SEC61GP60059 68 aa11.48□□□□□ -0.57
PTPRA-205ENST00000399903 PRO0255Q9UI72 69 aa11.48□□□□□ -0.57
PTPRA-205ENST00000399903 ESRGQ1W209 222 aa11.48□□□□□ -0.57
PTPRA-205ENST00000399903 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
PTPRA-205ENST00000399903 ATP5EP56381 51 aaPredicted RBP11.46□□□□□ -0.58
PTPRA-205ENST00000399903 IGLV6-57P01721 117 aa11.45□□□□□ -0.58
PTPRA-205ENST00000399903 C9orf66Q5T8R8 295 aa11.44□□□□□ -0.58
PTPRA-205ENST00000399903 PSPHP1O15172 72 aa11.44□□□□□ -0.58
PTPRA-205ENST00000399903 CMC4P56277 68 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-205ENST00000399903 F8WDY8 70 aa11.42□□□□□ -0.58
PTPRA-205ENST00000399903 X6R8D5 127 aa11.42□□□□□ -0.58
PTPRA-205ENST00000399903 IGKV4-1P06312 121 aa11.42□□□□□ -0.58
PTPRA-205ENST00000399903 TENM3Q9P273 2699 aa11.41□□□□□ -0.58
PTPRA-205ENST00000399903 SMIM29Q86T20 159 aa11.4□□□□□ -0.58
PTPRA-205ENST00000399903 ANK2Q01484 3957 aa11.39□□□□□ -0.59
PTPRA-205ENST00000399903 OXLD1Q5BKU9 147 aa11.38□□□□□ -0.59
PTPRA-205ENST00000399903 C6orf48Q9UBA6 75 aa11.38□□□□□ -0.59
PTPRA-205ENST00000399903 OCR1Q9BZK8 76 aa11.37□□□□□ -0.59
PTPRA-205ENST00000399903 NBEAL1Q6ZS30 2694 aa11.37□□□□□ -0.59
PTPRA-205ENST00000399903 CAMK2N2Q96S95 79 aa11.37□□□□□ -0.59
PTPRA-205ENST00000399903 Q6ZTC4 211 aa11.35□□□□□ -0.59
PTPRA-205ENST00000399903 ELOF1P60002 83 aaKnown RBP11.34□□□□□ -0.59
PTPRA-205ENST00000399903 RETNQ9HD89 108 aa11.33□□□□□ -0.6
PTPRA-205ENST00000399903 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
PTPRA-205ENST00000399903 MGAM2Q2M2H8 2515 aa11.32□□□□□ -0.6
PTPRA-205ENST00000399903 H3BQ85 93 aa11.31□□□□□ -0.6
PTPRA-205ENST00000399903 A0A0J9YWU9 116 aa11.31□□□□□ -0.6
PTPRA-205ENST00000399903 IGHV4-30-4P0DP06 118 aa11.31□□□□□ -0.6
PTPRA-205ENST00000399903 C1orf64Q8NEQ6 169 aa11.3□□□□□ -0.6
PTPRA-205ENST00000399903 BAHCC1Q9P281 2608 aa11.3□□□□□ -0.6
PTPRA-205ENST00000399903 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
PTPRA-205ENST00000399903 DEFB116Q30KQ4 102 aa11.28□□□□□ -0.6
PTPRA-205ENST00000399903 PMAIP1Q13794 54 aa11.26□□□□□ -0.61
PTPRA-205ENST00000399903 VPREB1P12018 145 aa11.26□□□□□ -0.61
PTPRA-205ENST00000399903 M0R378 163 aa11.25□□□□□ -0.61
PTPRA-205ENST00000399903 Q6ZRP5 223 aa11.25□□□□□ -0.61
PTPRA-205ENST00000399903 Q6ZRU5 148 aa11.25□□□□□ -0.61
PTPRA-205ENST00000399903 hDV103S1A0JD37 113 aa11.25□□□□□ -0.61
PTPRA-205ENST00000399903 APOC4P55056 127 aa11.25□□□□□ -0.61
PTPRA-205ENST00000399903 LINC00528Q8N1L1 170 aa11.25□□□□□ -0.61
PTPRA-205ENST00000399903 RPL37AP8A6NKH3 93 aa11.24□□□□□ -0.61
PTPRA-205ENST00000399903 KPRPQ5T749 579 aaPredicted RBP11.23□□□□□ -0.61
PTPRA-205ENST00000399903 Q8NAQ8 132 aa11.23□□□□□ -0.61
PTPRA-205ENST00000399903 NKAPP1Q8N9T2 125 aa11.23□□□□□ -0.61
PTPRA-205ENST00000399903 KRTAP24-1Q3LI83 254 aa11.22□□□□□ -0.61
PTPRA-205ENST00000399903 KRTAP10-11P60412 298 aa11.22□□□□□ -0.61
PTPRA-205ENST00000399903 A0A0G2JQZ4 141 aa11.2□□□□□ -0.62
PTPRA-205ENST00000399903 A0A1W2PNN7 141 aa11.2□□□□□ -0.62
PTPRA-205ENST00000399903 A8MUN3 132 aa11.2□□□□□ -0.62
PTPRA-205ENST00000399903 A8MU10 97 aa11.2□□□□□ -0.62
PTPRA-205ENST00000399903 WFDC13Q8IUB5 93 aa11.2□□□□□ -0.62
PTPRA-205ENST00000399903 ST20-AS1Q8NBB2 130 aa11.2□□□□□ -0.62
PTPRA-205ENST00000399903 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
PTPRA-205ENST00000399903 LELP1Q5T871 98 aa11.19□□□□□ -0.62
PTPRA-205ENST00000399903 TRAV22A0A0B4J277 110 aa11.19□□□□□ -0.62
PTPRA-205ENST00000399903 Q8N377 158 aa11.19□□□□□ -0.62
PTPRA-205ENST00000399903 K7EQZ3 153 aa11.18□□□□□ -0.62
PTPRA-205ENST00000399903 C1orf137Q5JT78 98 aa11.18□□□□□ -0.62
PTPRA-205ENST00000399903 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
PTPRA-205ENST00000399903 WFDC10BQ8IUB3 73 aa11.17□□□□□ -0.62
PTPRA-205ENST00000399903 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.16□□□□□ -0.62
PTPRA-205ENST00000399903 ETDCA0A1B0GVM5 59 aa11.16□□□□□ -0.62
PTPRA-205ENST00000399903 A0A1W2PNM2 257 aa11.16□□□□□ -0.62
PTPRA-205ENST00000399903 SPTSSBQ8NFR3 76 aa11.15□□□□□ -0.62
PTPRA-205ENST00000399903 CMYA5Q8N3K9 4069 aa11.15□□□□□ -0.62
PTPRA-205ENST00000399903 IGKV2D-24A0A075B6R9 120 aa11.15□□□□□ -0.62
PTPRA-205ENST00000399903 GVQW2A0A096LPI5 108 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-205ENST00000399903 PRR15Q8IV56 129 aa11.14□□□□□ -0.63
PTPRA-205ENST00000399903 EGFEM1PQ0D2K5 195 aa11.13□□□□□ -0.63
PTPRA-205ENST00000399903 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
PTPRA-205ENST00000399903 SERTAD4-AS1Q5TG53 156 aa11.12□□□□□ -0.63
PTPRA-205ENST00000399903 C7orf33Q8WU49 177 aa11.11□□□□□ -0.63
PTPRA-205ENST00000399903 LINC00208Q96KT6 92 aa11.1□□□□□ -0.63
PTPRA-205ENST00000399903 CHKB-CPT1BH3BT56 60 aa11.1□□□□□ -0.63
PTPRA-205ENST00000399903 UBE2BP63146 152 aa11.1□□□□□ -0.63
PTPRA-205ENST00000399903 Q1T7F1 81 aa11.1□□□□□ -0.63
PTPRA-205ENST00000399903 DSCR10P59022 87 aa11.08□□□□□ -0.64
PTPRA-205ENST00000399903 FAM168BA1KXE4 195 aa11.07□□□□□ -0.64
PTPRA-205ENST00000399903 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
PTPRA-205ENST00000399903 PSCAO43653 123 aa11.06□□□□□ -0.64
PTPRA-205ENST00000399903 SYCNQ0VAF6 134 aa11.06□□□□□ -0.64
PTPRA-205ENST00000399903 C15orf56Q8N910 161 aa11.06□□□□□ -0.64
PTPRA-205ENST00000399903 HCG22E2RYF7 251 aa11.05□□□□□ -0.64
PTPRA-205ENST00000399903 MP68P56378 58 aa11.05□□□□□ -0.64
PTPRA-205ENST00000399903 Q8NBF4 154 aa11.05□□□□□ -0.64
PTPRA-205ENST00000399903 RPL37AP61513 92 aaKnown RBP11.04□□□□□ -0.64
PTPRA-205ENST00000399903 IGLV5-48A0A075B6I7 105 aa11.03□□□□□ -0.64
PTPRA-205ENST00000399903 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
PTPRA-205ENST00000399903 Q9BRP9 147 aa11.02□□□□□ -0.64
PTPRA-205ENST00000399903 B9D2Q9BPU9 175 aa11□□□□□ -0.65
PTPRA-205ENST00000399903 ZCCHC13Q8WW36 166 aaKnown RBP11□□□□□ -0.65
PTPRA-205ENST00000399903 Q6ZRX8 168 aa10.99□□□□□ -0.65
PTPRA-205ENST00000399903 KCNQ1DNQ9H478 68 aa10.99□□□□□ -0.65
PTPRA-205ENST00000399903 TENM2Q9NT68 2774 aa10.99□□□□□ -0.65
PTPRA-205ENST00000399903 DHRS4-AS1Q9P1J3 65 aa10.99□□□□□ -0.65
PTPRA-205ENST00000399903 A0A087WSZ3 146 aa10.97□□□□□ -0.65
PTPRA-205ENST00000399903 Q5VV11 94 aa10.96□□□□□ -0.66
PTPRA-205ENST00000399903 DEFB131BA0A096LNP1 70 aa10.95□□□□□ -0.66
PTPRA-205ENST00000399903 A6NED7 52 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms