RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 COA5Q86WW8 74 aa7.84□□□□□ -1.15
CACNA1C-213ENST00000399629 CNBPP62633 177 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-213ENST00000399629 PRR15Q8IV56 129 aa7.83□□□□□ -1.16
CACNA1C-213ENST00000399629 LINC00612Q8N6U2 182 aa7.81□□□□□ -1.16
CACNA1C-213ENST00000399629 MYO18BQ8IUG5 2567 aa7.81□□□□□ -1.16
CACNA1C-213ENST00000399629 DOPEY1Q5JWR5 2465 aa7.81□□□□□ -1.16
CACNA1C-213ENST00000399629 A0A0D9SG42 100 aa7.81□□□□□ -1.16
CACNA1C-213ENST00000399629 UQCR11O14957 56 aa7.81□□□□□ -1.16
CACNA1C-213ENST00000399629 A0A0G2JQZ4 141 aa7.8□□□□□ -1.16
CACNA1C-213ENST00000399629 GIG44P09565 113 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-213ENST00000399629 DNAH12Q6ZR08 3092 aa7.8□□□□□ -1.16
CACNA1C-213ENST00000399629 WIPF1O43516 503 aa7.79□□□□□ -1.16
CACNA1C-213ENST00000399629 JMJD1CQ15652 2540 aa7.79□□□□□ -1.16
CACNA1C-213ENST00000399629 KRTAP1-1Q07627 177 aa7.78□□□□□ -1.16
CACNA1C-213ENST00000399629 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
CACNA1C-213ENST00000399629 Q8N377 158 aa7.78□□□□□ -1.16
CACNA1C-213ENST00000399629 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
CACNA1C-213ENST00000399629 Q8N1X5 172 aa7.77□□□□□ -1.17
CACNA1C-213ENST00000399629 MIR22HGQ0VDD5 57 aa7.75□□□□□ -1.17
CACNA1C-213ENST00000399629 ZFYVE26Q68DK2 2539 aa7.74□□□□□ -1.17
CACNA1C-213ENST00000399629 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
CACNA1C-213ENST00000399629 LITAFQ99732 161 aa7.74□□□□□ -1.17
CACNA1C-213ENST00000399629 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
CACNA1C-213ENST00000399629 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-213ENST00000399629 C4orf26Q17RF5 130 aa7.72□□□□□ -1.17
CACNA1C-213ENST00000399629 ABCA12Q86UK0 2595 aa7.71□□□□□ -1.17
CACNA1C-213ENST00000399629 FN1P02751 2386 aaKnown RBP7.71□□□□□ -1.17
CACNA1C-213ENST00000399629 ERC2-IT1O76042 136 aa7.69□□□□□ -1.18
CACNA1C-213ENST00000399629 Q5VSD8 79 aa7.68□□□□□ -1.18
CACNA1C-213ENST00000399629 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
CACNA1C-213ENST00000399629 C2CD3Q4AC94 2353 aa7.68□□□□□ -1.18
CACNA1C-213ENST00000399629 CDC42SE1Q9NRR8 79 aa7.67□□□□□ -1.18
CACNA1C-213ENST00000399629 CD164Q04900 197 aa7.67□□□□□ -1.18
CACNA1C-213ENST00000399629 MYO9AB2RTY4 2548 aa7.67□□□□□ -1.18
CACNA1C-213ENST00000399629 ZNF462Q96JM2 2506 aa7.66□□□□□ -1.18
CACNA1C-213ENST00000399629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
CACNA1C-213ENST00000399629 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
CACNA1C-213ENST00000399629 HRES1P13985 223 aa7.65□□□□□ -1.18
CACNA1C-213ENST00000399629 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
CACNA1C-213ENST00000399629 CYP4F30PQ9H0H9 118 aa7.64□□□□□ -1.19
CACNA1C-213ENST00000399629 LINC00483Q53H64 154 aa7.64□□□□□ -1.19
CACNA1C-213ENST00000399629 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
CACNA1C-213ENST00000399629 ANKRD17O75179 2603 aaKnown RBP7.62□□□□□ -1.19
CACNA1C-213ENST00000399629 A8MUN3 132 aa7.62□□□□□ -1.19
CACNA1C-213ENST00000399629 FAM229BQ4G0N7 80 aa7.62□□□□□ -1.19
CACNA1C-213ENST00000399629 LCE6AA0A183 80 aa7.62□□□□□ -1.19
CACNA1C-213ENST00000399629 C5orf42Q9H799 3197 aa7.61□□□□□ -1.19
CACNA1C-213ENST00000399629 S4R3F8 94 aa7.61□□□□□ -1.19
CACNA1C-213ENST00000399629 LUZP6Q538Z0 58 aa7.61□□□□□ -1.19
CACNA1C-213ENST00000399629 TLN1Q9Y490 2541 aaKnown RBP7.6□□□□□ -1.19
CACNA1C-213ENST00000399629 BRCA2P51587 3418 aa7.59□□□□□ -1.19
CACNA1C-213ENST00000399629 CSAG1Q6PB30 78 aa7.56□□□□□ -1.2
CACNA1C-213ENST00000399629 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
CACNA1C-213ENST00000399629 CEP350Q5VT06 3117 aa7.55□□□□□ -1.2
CACNA1C-213ENST00000399629 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
CACNA1C-213ENST00000399629 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-213ENST00000399629 MKI67P46013 3256 aaKnown RBP7.53□□□□□ -1.2
CACNA1C-213ENST00000399629 F8P00451 2351 aa7.52□□□□□ -1.21
CACNA1C-213ENST00000399629 OXTP01178 125 aa7.51□□□□□ -1.21
CACNA1C-213ENST00000399629 ZCCHC13Q8WW36 166 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-213ENST00000399629 ANKRD11Q6UB99 2663 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-213ENST00000399629 TLN2Q9Y4G6 2542 aa7.48□□□□□ -1.21
CACNA1C-213ENST00000399629 XIRP2A4UGR9 3374 aa7.47□□□□□ -1.21
CACNA1C-213ENST00000399629 USP9XQ93008 2570 aaPredicted RBP7.46□□□□□ -1.22
CACNA1C-213ENST00000399629 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
CACNA1C-213ENST00000399629 WDR87Q6ZQQ6 2873 aa7.45□□□□□ -1.22
CACNA1C-213ENST00000399629 LAMA3Q16787 3333 aa7.45□□□□□ -1.22
CACNA1C-213ENST00000399629 CHD8Q9HCK8 2581 aa7.45□□□□□ -1.22
CACNA1C-213ENST00000399629 A0A1B0GU33 70 aa7.44□□□□□ -1.22
CACNA1C-213ENST00000399629 KTN1-AS1Q86SY8 53 aa7.43□□□□□ -1.22
CACNA1C-213ENST00000399629 R4GN34 69 aa7.43□□□□□ -1.22
CACNA1C-213ENST00000399629 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
CACNA1C-213ENST00000399629 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
CACNA1C-213ENST00000399629 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
CACNA1C-213ENST00000399629 Q1T7F1 81 aa7.39□□□□□ -1.23
CACNA1C-213ENST00000399629 FASNP49327 2511 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-213ENST00000399629 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
CACNA1C-213ENST00000399629 SPTBN4Q9H254 2564 aa7.38□□□□□ -1.23
CACNA1C-213ENST00000399629 SPINK7P58062 85 aa7.37□□□□□ -1.23
CACNA1C-213ENST00000399629 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
CACNA1C-213ENST00000399629 ACANP16112 2415 aa7.35□□□□□ -1.23
CACNA1C-213ENST00000399629 CDH23Q9H251 3354 aa7.35□□□□□ -1.23
CACNA1C-213ENST00000399629 SZT2Q5T011 3432 aa7.35□□□□□ -1.23
CACNA1C-213ENST00000399629 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
CACNA1C-213ENST00000399629 LCA10Q71F78 164 aa7.33□□□□□ -1.24
CACNA1C-213ENST00000399629 CR1P17927 2039 aa7.33□□□□□ -1.24
CACNA1C-213ENST00000399629 DNAH14Q0VDD8 3507 aa7.32□□□□□ -1.24
CACNA1C-213ENST00000399629 PKD1L2Q7Z442 2459 aa7.31□□□□□ -1.24
CACNA1C-213ENST00000399629 H7BZZ5 65 aa7.31□□□□□ -1.24
CACNA1C-213ENST00000399629 POLQO75417 2590 aa7.29□□□□□ -1.24
CACNA1C-213ENST00000399629 CEP295Q9C0D2 2601 aa7.29□□□□□ -1.24
CACNA1C-213ENST00000399629 MTORP42345 2549 aa7.29□□□□□ -1.24
CACNA1C-213ENST00000399629 H3BS24 57 aa7.29□□□□□ -1.24
CACNA1C-213ENST00000399629 KRTAP1-5Q9BYS1 174 aa7.28□□□□□ -1.24
CACNA1C-213ENST00000399629 M0QZ58 72 aa7.28□□□□□ -1.24
CACNA1C-213ENST00000399629 Q5W150 140 aa7.28□□□□□ -1.24
CACNA1C-213ENST00000399629 MMP24-AS1A0A0U1RRL7 71 aa7.28□□□□□ -1.24
CACNA1C-213ENST00000399629 Q8N9P0 234 aaPredicted RBP7.27□□□□□ -1.25
CACNA1C-213ENST00000399629 USP9YO00507 2555 aaPredicted RBP7.27□□□□□ -1.25
CACNA1C-213ENST00000399629 SETD2Q9BYW2 2564 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms