RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 LINC00308Q8TCZ7 52 aa12.28□□□□□ -0.44
RUNX1-204ENST00000399237 TRAV23DV6A0A075B6W5 121 aa12.26□□□□□ -0.45
RUNX1-204ENST00000399237 ZNF815PA8K554 130 aa12.26□□□□□ -0.45
RUNX1-204ENST00000399237 S100A7L2Q5SY68 101 aa12.26□□□□□ -0.45
RUNX1-204ENST00000399237 TIMM17BO60830 172 aa12.25□□□□□ -0.45
RUNX1-204ENST00000399237 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
RUNX1-204ENST00000399237 GAGE2AQ6NT46 116 aa12.24□□□□□ -0.45
RUNX1-204ENST00000399237 S100A12P80511 92 aa12.23□□□□□ -0.45
RUNX1-204ENST00000399237 Q8NBF4 154 aa12.23□□□□□ -0.45
RUNX1-204ENST00000399237 MUC17Q685J3 4493 aa12.22□□□□□ -0.45
RUNX1-204ENST00000399237 A0A0U1RQV1 116 aa12.22□□□□□ -0.45
RUNX1-204ENST00000399237 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
RUNX1-204ENST00000399237 ATOH7Q8N100 152 aa12.22□□□□□ -0.45
RUNX1-204ENST00000399237 SPANXCQ9NY87 97 aa12.22□□□□□ -0.45
RUNX1-204ENST00000399237 CTAG1AP78358 180 aa12.2□□□□□ -0.46
RUNX1-204ENST00000399237 ST20-AS1Q8NBB2 130 aa12.18□□□□□ -0.46
RUNX1-204ENST00000399237 MOBPQ13875 183 aa12.17□□□□□ -0.46
RUNX1-204ENST00000399237 SPAG11AQ6PDA7 123 aa12.17□□□□□ -0.46
RUNX1-204ENST00000399237 IGLV7-46A0A075B6I9 117 aa12.16□□□□□ -0.46
RUNX1-204ENST00000399237 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
RUNX1-204ENST00000399237 TPRXLQ17RH7 258 aa12.15□□□□□ -0.46
RUNX1-204ENST00000399237 PCP2Q8IVA1 136 aa12.15□□□□□ -0.46
RUNX1-204ENST00000399237 SPANXDQ9BXN6 97 aa12.15□□□□□ -0.46
RUNX1-204ENST00000399237 OR13C6PQ8NH95 151 aa12.14□□□□□ -0.47
RUNX1-204ENST00000399237 C20orf202A1L168 122 aa12.13□□□□□ -0.47
RUNX1-204ENST00000399237 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
RUNX1-204ENST00000399237 FAT4Q6V0I7 4981 aa12.13□□□□□ -0.47
RUNX1-204ENST00000399237 JOSD1Q15040 202 aaPredicted RBP12.12□□□□□ -0.47
RUNX1-204ENST00000399237 C4orf48Q5BLP8 95 aa12.1□□□□□ -0.47
RUNX1-204ENST00000399237 SCGB1D4Q6XE38 83 aa12.1□□□□□ -0.47
RUNX1-204ENST00000399237 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
RUNX1-204ENST00000399237 CDIP1Q9H305 208 aa12.1□□□□□ -0.47
RUNX1-204ENST00000399237 SPINK1P00995 79 aa12.08□□□□□ -0.48
RUNX1-204ENST00000399237 SSBP3-AS1Q7Z2R9 100 aa12.08□□□□□ -0.48
RUNX1-204ENST00000399237 ELOF1P60002 83 aaKnown RBP12.06□□□□□ -0.48
RUNX1-204ENST00000399237 C6orf99Q4VX62 202 aa12.06□□□□□ -0.48
RUNX1-204ENST00000399237 MUSTN1Q8IVN3 82 aa12.05□□□□□ -0.48
RUNX1-204ENST00000399237 LINC00518Q8N0U6 118 aa12.05□□□□□ -0.48
RUNX1-204ENST00000399237 Q8N377 158 aa12.05□□□□□ -0.48
RUNX1-204ENST00000399237 SPRR1BP22528 89 aa12.04□□□□□ -0.48
RUNX1-204ENST00000399237 LCE2AQ5TA79 106 aaPredicted RBP12.04□□□□□ -0.48
RUNX1-204ENST00000399237 FP248Q71RG6 208 aaPredicted RBP12.04□□□□□ -0.48
RUNX1-204ENST00000399237 CBY1Q9Y3M2 126 aa12.04□□□□□ -0.48
RUNX1-204ENST00000399237 S100A1P23297 94 aa12.03□□□□□ -0.48
RUNX1-204ENST00000399237 COX7BP24311 80 aa12.03□□□□□ -0.48
RUNX1-204ENST00000399237 HINT1P49773 126 aaPredicted RBP12.03□□□□□ -0.48
RUNX1-204ENST00000399237 KRTAP13-3Q3SY46 172 aa12.03□□□□□ -0.48
RUNX1-204ENST00000399237 C9orf153Q5TBE3 101 aa12.03□□□□□ -0.48
RUNX1-204ENST00000399237 C5orf52A6NGY3 159 aa12.02□□□□□ -0.49
RUNX1-204ENST00000399237 IFITM1P13164 125 aa12.02□□□□□ -0.49
RUNX1-204ENST00000399237 KRTAP9-2Q9BYQ4 174 aa12.02□□□□□ -0.49
RUNX1-204ENST00000399237 RPS29P62273 56 aaKnown RBP12.01□□□□□ -0.49
RUNX1-204ENST00000399237 DHRS4-AS1Q9P1J3 65 aa12.01□□□□□ -0.49
RUNX1-204ENST00000399237 Q6ZVH6 145 aa11.99□□□□□ -0.49
RUNX1-204ENST00000399237 S100A2P29034 98 aa11.98□□□□□ -0.49
RUNX1-204ENST00000399237 AKR1D1P51857 326 aa11.97□□□□□ -0.49
RUNX1-204ENST00000399237 A6NDN8 102 aa11.96□□□□□ -0.49
RUNX1-204ENST00000399237 SNRPEP62304 92 aaKnown RBP11.96□□□□□ -0.49
RUNX1-204ENST00000399237 LINC01547P58512 204 aaPredicted RBP11.95□□□□□ -0.5
RUNX1-204ENST00000399237 TRBV7-6A0A0J9YX20 115 aa11.94□□□□□ -0.5
RUNX1-204ENST00000399237 COPS9Q8WXC6 57 aa11.94□□□□□ -0.5
RUNX1-204ENST00000399237 Q1RN00 199 aa11.92□□□□□ -0.5
RUNX1-204ENST00000399237 SMIM29Q86T20 159 aa11.92□□□□□ -0.5
RUNX1-204ENST00000399237 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
RUNX1-204ENST00000399237 SMIM11BQ8TCY0 68 aa11.92□□□□□ -0.5
RUNX1-204ENST00000399237 A0A1B0GWB2 263 aa11.91□□□□□ -0.5
RUNX1-204ENST00000399237 SLC25A20O43772 301 aa11.91□□□□□ -0.5
RUNX1-204ENST00000399237 S100A6P06703 90 aa11.9□□□□□ -0.5
RUNX1-204ENST00000399237 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
RUNX1-204ENST00000399237 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
RUNX1-204ENST00000399237 IGLV5-48A0A075B6I7 105 aa11.88□□□□□ -0.51
RUNX1-204ENST00000399237 TAL2Q16559 108 aa11.88□□□□□ -0.51
RUNX1-204ENST00000399237 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
RUNX1-204ENST00000399237 SLC25A34Q6PIV7 304 aa11.87□□□□□ -0.51
RUNX1-204ENST00000399237 TEX49A0A1B0GTD5 131 aa11.86□□□□□ -0.51
RUNX1-204ENST00000399237 A4D1N5 150 aa11.86□□□□□ -0.51
RUNX1-204ENST00000399237 HSBP1L1C9JCN9 74 aa11.86□□□□□ -0.51
RUNX1-204ENST00000399237 A0A0G2JQZ4 141 aa11.85□□□□□ -0.51
RUNX1-204ENST00000399237 KRTAP4-1Q9BYQ7 146 aa11.85□□□□□ -0.51
RUNX1-204ENST00000399237 SCGB1D1O95968 90 aa11.83□□□□□ -0.52
RUNX1-204ENST00000399237 ASB16-AS1Q495Z4 193 aa11.82□□□□□ -0.52
RUNX1-204ENST00000399237 COX8AP10176 69 aa11.79□□□□□ -0.52
RUNX1-204ENST00000399237 XP32Q5T750 250 aa11.79□□□□□ -0.52
RUNX1-204ENST00000399237 C12orf57Q99622 126 aa11.79□□□□□ -0.52
RUNX1-204ENST00000399237 PRO1933Q9H354 126 aa11.79□□□□□ -0.52
RUNX1-204ENST00000399237 H7C2G1 150 aa11.77□□□□□ -0.53
RUNX1-204ENST00000399237 LIMD2Q9BT23 127 aa11.77□□□□□ -0.53
RUNX1-204ENST00000399237 CD164Q04900 197 aa11.76□□□□□ -0.53
RUNX1-204ENST00000399237 LINC00575Q6W349 94 aa11.76□□□□□ -0.53
RUNX1-204ENST00000399237 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
RUNX1-204ENST00000399237 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
RUNX1-204ENST00000399237 DLEU1O43261 78 aa11.72□□□□□ -0.53
RUNX1-204ENST00000399237 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
RUNX1-204ENST00000399237 Q6ZQY7 126 aa11.71□□□□□ -0.53
RUNX1-204ENST00000399237 KRTAP9-6A0A140TA67 174 aa11.7□□□□□ -0.54
RUNX1-204ENST00000399237 SEC61BP60468 96 aaKnown RBP11.7□□□□□ -0.54
RUNX1-204ENST00000399237 PAM16Q9Y3D7 125 aa11.7□□□□□ -0.54
RUNX1-204ENST00000399237 Q5XG85 94 aa11.69□□□□□ -0.54
RUNX1-204ENST00000399237 C2orf91Q6ZV80 131 aa11.69□□□□□ -0.54
RUNX1-204ENST00000399237 hADV29S1A0JD25 119 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms