RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 C3orf84H3BNL1 204 aa12.79□□□□□ -0.36
COL13A1-205ENST00000398978 CASC10Q5T4H9 136 aa12.79□□□□□ -0.36
COL13A1-205ENST00000398978 FAM168BA1KXE4 195 aa12.78□□□□□ -0.36
COL13A1-205ENST00000398978 SYCNQ0VAF6 134 aa12.78□□□□□ -0.36
COL13A1-205ENST00000398978 HRCT1Q6UXD1 115 aa12.77□□□□□ -0.37
COL13A1-205ENST00000398978 WIPF1O43516 503 aa12.77□□□□□ -0.37
COL13A1-205ENST00000398978 C4orf26Q17RF5 130 aa12.77□□□□□ -0.37
COL13A1-205ENST00000398978 NBEAL1Q6ZS30 2694 aa12.76□□□□□ -0.37
COL13A1-205ENST00000398978 NKAPP1Q8N9T2 125 aa12.76□□□□□ -0.37
COL13A1-205ENST00000398978 RMI2Q96E14 147 aa12.76□□□□□ -0.37
COL13A1-205ENST00000398978 PDE6GP18545 87 aa12.75□□□□□ -0.37
COL13A1-205ENST00000398978 C11orf45Q8TAV5 145 aa12.75□□□□□ -0.37
COL13A1-205ENST00000398978 TM2D3Q9BRN9 247 aa12.75□□□□□ -0.37
COL13A1-205ENST00000398978 C7orf33Q8WU49 177 aa12.75□□□□□ -0.37
COL13A1-205ENST00000398978 H3BNG1 76 aa12.73□□□□□ -0.37
COL13A1-205ENST00000398978 LINC01556Q5JQF7 62 aa12.72□□□□□ -0.37
COL13A1-205ENST00000398978 TRAV7A0A075B6U4 112 aa12.72□□□□□ -0.37
COL13A1-205ENST00000398978 BPY2O14599 106 aa12.72□□□□□ -0.37
COL13A1-205ENST00000398978 CXCL6P80162 114 aa12.72□□□□□ -0.37
COL13A1-205ENST00000398978 TRBV7-6A0A0J9YX20 115 aa12.71□□□□□ -0.37
COL13A1-205ENST00000398978 CSMD3Q7Z407 3707 aa12.71□□□□□ -0.37
COL13A1-205ENST00000398978 RPS28P62857 69 aaKnown RBP12.69□□□□□ -0.38
COL13A1-205ENST00000398978 Q8N377 158 aa12.69□□□□□ -0.38
COL13A1-205ENST00000398978 LYSTQ99698 3801 aa12.69□□□□□ -0.38
COL13A1-205ENST00000398978 H3BQ85 93 aa12.68□□□□□ -0.38
COL13A1-205ENST00000398978 H7BZZ5 65 aa12.68□□□□□ -0.38
COL13A1-205ENST00000398978 ST20-AS1Q8NBB2 130 aa12.68□□□□□ -0.38
COL13A1-205ENST00000398978 KRTAP24-1Q3LI83 254 aa12.67□□□□□ -0.38
COL13A1-205ENST00000398978 MRAPQ8TCY5 172 aa12.67□□□□□ -0.38
COL13A1-205ENST00000398978 NREPQ16612 68 aa12.66□□□□□ -0.38
COL13A1-205ENST00000398978 FAM236DA0A1B0GTK5 79 aa12.65□□□□□ -0.38
COL13A1-205ENST00000398978 FAM236CP0DP71 79 aa12.65□□□□□ -0.38
COL13A1-205ENST00000398978 KCNQ1DNQ9H478 68 aa12.65□□□□□ -0.38
COL13A1-205ENST00000398978 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
COL13A1-205ENST00000398978 LINC00588Q9Y4M8 146 aa12.64□□□□□ -0.39
COL13A1-205ENST00000398978 F8WEM9 126 aa12.64□□□□□ -0.39
COL13A1-205ENST00000398978 Q9BRP9 147 aa12.64□□□□□ -0.39
COL13A1-205ENST00000398978 DNAH10Q8IVF4 4471 aa12.63□□□□□ -0.39
COL13A1-205ENST00000398978 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
COL13A1-205ENST00000398978 A0A0G2JQZ4 141 aa12.61□□□□□ -0.39
COL13A1-205ENST00000398978 A0A1W2PNN7 141 aa12.61□□□□□ -0.39
COL13A1-205ENST00000398978 IGKV4-1P06312 121 aa12.6□□□□□ -0.39
COL13A1-205ENST00000398978 ERC2-IT1O76042 136 aa12.6□□□□□ -0.39
COL13A1-205ENST00000398978 DNAH10OSP0CZ25 163 aa12.6□□□□□ -0.39
COL13A1-205ENST00000398978 MGAM2Q2M2H8 2515 aa12.59□□□□□ -0.39
COL13A1-205ENST00000398978 ETDCA0A1B0GVM5 59 aa12.58□□□□□ -0.4
COL13A1-205ENST00000398978 KLKP1Q107X0 134 aa12.57□□□□□ -0.4
COL13A1-205ENST00000398978 Q6ZRX8 168 aa12.57□□□□□ -0.4
COL13A1-205ENST00000398978 SRRM2Q9UQ35 2752 aaKnown RBP12.57□□□□□ -0.4
COL13A1-205ENST00000398978 Q5XG85 94 aa12.56□□□□□ -0.4
COL13A1-205ENST00000398978 A0A1W2PNM2 257 aa12.56□□□□□ -0.4
COL13A1-205ENST00000398978 DNAH1Q9P2D7 4330 aa12.55□□□□□ -0.4
COL13A1-205ENST00000398978 IGLV1-50A0A075B6I6 118 aa12.55□□□□□ -0.4
COL13A1-205ENST00000398978 DNAH3Q8TD57 4116 aa12.55□□□□□ -0.4
COL13A1-205ENST00000398978 STAB2Q8WWQ8 2551 aa12.55□□□□□ -0.4
COL13A1-205ENST00000398978 UBE2BP63146 152 aa12.54□□□□□ -0.4
COL13A1-205ENST00000398978 HUWE1Q7Z6Z7 4374 aaKnown RBP12.54□□□□□ -0.4
COL13A1-205ENST00000398978 TENM2Q9NT68 2774 aa12.54□□□□□ -0.4
COL13A1-205ENST00000398978 BCE1O60756 84 aa12.53□□□□□ -0.4
COL13A1-205ENST00000398978 KRTAP4-16G5E9R7 235 aaPredicted RBP12.53□□□□□ -0.4
COL13A1-205ENST00000398978 C1orf137Q5JT78 98 aa12.53□□□□□ -0.4
COL13A1-205ENST00000398978 TMEM254Q8TBM7 123 aa12.51□□□□□ -0.41
COL13A1-205ENST00000398978 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
COL13A1-205ENST00000398978 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
COL13A1-205ENST00000398978 MRPL55Q7Z7F7 128 aaKnown RBP12.5□□□□□ -0.41
COL13A1-205ENST00000398978 DHRS4-AS1Q9P1J3 65 aa12.5□□□□□ -0.41
COL13A1-205ENST00000398978 FUSP35637 526 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL13A1-205ENST00000398978 FAM30AQ9NZY2 134 aa12.49□□□□□ -0.41
COL13A1-205ENST00000398978 TLX1NBP0CAT3 122 aa12.49□□□□□ -0.41
COL13A1-205ENST00000398978 SMIM29Q86T20 159 aa12.47□□□□□ -0.41
COL13A1-205ENST00000398978 F8WDY8 70 aa12.46□□□□□ -0.41
COL13A1-205ENST00000398978 PRYO14603 147 aa12.46□□□□□ -0.41
COL13A1-205ENST00000398978 DEFB116Q30KQ4 102 aa12.46□□□□□ -0.41
COL13A1-205ENST00000398978 HIGD2AQ9BW72 106 aa12.46□□□□□ -0.41
COL13A1-205ENST00000398978 OCR1Q9BZK8 76 aa12.46□□□□□ -0.42
COL13A1-205ENST00000398978 COL7A1Q02388 2944 aa12.45□□□□□ -0.42
COL13A1-205ENST00000398978 SPRR1AP35321 89 aa12.45□□□□□ -0.42
COL13A1-205ENST00000398978 PRLHP81277 87 aa12.45□□□□□ -0.42
COL13A1-205ENST00000398978 SERP1Q9Y6X1 66 aa12.45□□□□□ -0.42
COL13A1-205ENST00000398978 DNAH9Q9NYC9 4486 aa12.44□□□□□ -0.42
COL13A1-205ENST00000398978 A0A0U1RQV1 116 aa12.44□□□□□ -0.42
COL13A1-205ENST00000398978 TNP2Q05952 138 aa12.43□□□□□ -0.42
COL13A1-205ENST00000398978 PLA2G2DQ9UNK4 145 aa12.43□□□□□ -0.42
COL13A1-205ENST00000398978 LINC00474Q9P2X8 69 aa12.43□□□□□ -0.42
COL13A1-205ENST00000398978 LINC00336Q6ZUF6 198 aa12.42□□□□□ -0.42
COL13A1-205ENST00000398978 KRTAP1-5Q9BYS1 174 aa12.42□□□□□ -0.42
COL13A1-205ENST00000398978 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.41□□□□□ -0.42
COL13A1-205ENST00000398978 Q8NBF4 154 aa12.41□□□□□ -0.42
COL13A1-205ENST00000398978 REG3GQ6UW15 175 aa12.41□□□□□ -0.42
COL13A1-205ENST00000398978 A0A096LNI7 61 aa12.4□□□□□ -0.42
COL13A1-205ENST00000398978 EPM2AB3EWF7 344 aa12.4□□□□□ -0.42
COL13A1-205ENST00000398978 IGLV5-37A0A075B6J1 123 aa12.39□□□□□ -0.43
COL13A1-205ENST00000398978 K7EQZ3 153 aa12.39□□□□□ -0.43
COL13A1-205ENST00000398978 K7EIL1 84 aa12.39□□□□□ -0.43
COL13A1-205ENST00000398978 DSCR10P59022 87 aa12.38□□□□□ -0.43
COL13A1-205ENST00000398978 LINC00476Q8WZB0 136 aa12.38□□□□□ -0.43
COL13A1-205ENST00000398978 SEC61GP60059 68 aa12.36□□□□□ -0.43
COL13A1-205ENST00000398978 FP248Q71RG6 208 aaPredicted RBP12.36□□□□□ -0.43
COL13A1-205ENST00000398978 CHTF8P0CG12 524 aa12.36□□□□□ -0.43
COL13A1-205ENST00000398978 DNAH7Q8WXX0 4024 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms