RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 H3BPC8 53 aa9.41□□□□□ -0.9
PCDHA11-201ENST00000398640 IGLV6-57P01721 117 aa9.4□□□□□ -0.9
PCDHA11-201ENST00000398640 GIG44P09565 113 aaPredicted RBP9.4□□□□□ -0.9
PCDHA11-201ENST00000398640 OBSCN-AS1Q96MR7 158 aa9.4□□□□□ -0.9
PCDHA11-201ENST00000398640 A8MWP4 228 aa9.4□□□□□ -0.9
PCDHA11-201ENST00000398640 ANAPC11Q9NYG5 84 aa9.4□□□□□ -0.9
PCDHA11-201ENST00000398640 CASC10Q5T4H9 136 aa9.4□□□□□ -0.91
PCDHA11-201ENST00000398640 A0A0G2JQZ4 141 aa9.39□□□□□ -0.91
PCDHA11-201ENST00000398640 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
PCDHA11-201ENST00000398640 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
PCDHA11-201ENST00000398640 LITAFQ99732 161 aa9.38□□□□□ -0.91
PCDHA11-201ENST00000398640 HELZ2Q9BYK8 2649 aaKnown RBP9.37□□□□□ -0.91
PCDHA11-201ENST00000398640 C8orf87E5RJ46 101 aa9.37□□□□□ -0.91
PCDHA11-201ENST00000398640 SPINT4Q6UDR6 99 aa9.35□□□□□ -0.91
PCDHA11-201ENST00000398640 LOC101927531A0A1B0GV80 90 aa9.35□□□□□ -0.91
PCDHA11-201ENST00000398640 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
PCDHA11-201ENST00000398640 IGFL1Q6UW32 110 aa9.34□□□□□ -0.91
PCDHA11-201ENST00000398640 ZNF861PO60384 105 aa9.34□□□□□ -0.91
PCDHA11-201ENST00000398640 LINC00612Q8N6U2 182 aa9.34□□□□□ -0.91
PCDHA11-201ENST00000398640 C15orf56Q8N910 161 aa9.34□□□□□ -0.91
PCDHA11-201ENST00000398640 C5orf42Q9H799 3197 aa9.33□□□□□ -0.92
PCDHA11-201ENST00000398640 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
PCDHA11-201ENST00000398640 CR1P17927 2039 aa9.32□□□□□ -0.92
PCDHA11-201ENST00000398640 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
PCDHA11-201ENST00000398640 C9orf129Q5T035 196 aaKnown RBP9.31□□□□□ -0.92
PCDHA11-201ENST00000398640 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
PCDHA11-201ENST00000398640 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
PCDHA11-201ENST00000398640 IGLV5-37A0A075B6J1 123 aa9.3□□□□□ -0.92
PCDHA11-201ENST00000398640 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
PCDHA11-201ENST00000398640 COA5Q86WW8 74 aa9.29□□□□□ -0.92
PCDHA11-201ENST00000398640 RPS28P62857 69 aaKnown RBP9.29□□□□□ -0.92
PCDHA11-201ENST00000398640 WIPF1O43516 503 aa9.28□□□□□ -0.92
PCDHA11-201ENST00000398640 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
PCDHA11-201ENST00000398640 IGLV7-43P04211 117 aa9.27□□□□□ -0.92
PCDHA11-201ENST00000398640 PCNTO95613 3336 aa9.27□□□□□ -0.93
PCDHA11-201ENST00000398640 RBM12B-AS1Q9P1G2 102 aa9.26□□□□□ -0.93
PCDHA11-201ENST00000398640 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
PCDHA11-201ENST00000398640 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
PCDHA11-201ENST00000398640 LINC01554Q52M75 96 aa9.24□□□□□ -0.93
PCDHA11-201ENST00000398640 PRR34Q9NV39 138 aa9.24□□□□□ -0.93
PCDHA11-201ENST00000398640 Q8N377 158 aa9.24□□□□□ -0.93
PCDHA11-201ENST00000398640 C9orf163Q8N9P6 203 aa9.24□□□□□ -0.93
PCDHA11-201ENST00000398640 A0A1B0GVX0 72 aa9.23□□□□□ -0.93
PCDHA11-201ENST00000398640 USP24Q9UPU5 2620 aa9.22□□□□□ -0.93
PCDHA11-201ENST00000398640 TRANK1O15050 2925 aa9.22□□□□□ -0.93
PCDHA11-201ENST00000398640 PRR15Q8IV56 129 aa9.22□□□□□ -0.93
PCDHA11-201ENST00000398640 A8MUN3 132 aa9.22□□□□□ -0.93
PCDHA11-201ENST00000398640 TNP2Q05952 138 aa9.21□□□□□ -0.93
PCDHA11-201ENST00000398640 RANBP2P49792 3224 aaKnown RBP9.2□□□□□ -0.94
PCDHA11-201ENST00000398640 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
PCDHA11-201ENST00000398640 M0R2T5 61 aa9.18□□□□□ -0.94
PCDHA11-201ENST00000398640 FLNAP21333 2647 aaKnown RBP9.18□□□□□ -0.94
PCDHA11-201ENST00000398640 ITPR3Q14573 2671 aa9.17□□□□□ -0.94
PCDHA11-201ENST00000398640 UQCR11O14957 56 aa9.17□□□□□ -0.94
PCDHA11-201ENST00000398640 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
PCDHA11-201ENST00000398640 A0A0D9SG42 100 aa9.14□□□□□ -0.95
PCDHA11-201ENST00000398640 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
PCDHA11-201ENST00000398640 CFAP46Q8IYW2 2715 aa9.14□□□□□ -0.95
PCDHA11-201ENST00000398640 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
PCDHA11-201ENST00000398640 MIR22HGQ0VDD5 57 aa9.13□□□□□ -0.95
PCDHA11-201ENST00000398640 Q8N1X5 172 aa9.13□□□□□ -0.95
PCDHA11-201ENST00000398640 ZNF292O60281 2723 aa9.13□□□□□ -0.95
PCDHA11-201ENST00000398640 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
PCDHA11-201ENST00000398640 CNBPP62633 177 aaKnown RBP9.12□□□□□ -0.95
PCDHA11-201ENST00000398640 Q6ZSA8 131 aa9.12□□□□□ -0.95
PCDHA11-201ENST00000398640 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
PCDHA11-201ENST00000398640 LCE6AA0A183 80 aa9.11□□□□□ -0.95
PCDHA11-201ENST00000398640 LAMA3Q16787 3333 aa9.1□□□□□ -0.95
PCDHA11-201ENST00000398640 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
PCDHA11-201ENST00000398640 KRTAP21-3Q3LHN1 58 aa9.09□□□□□ -0.95
PCDHA11-201ENST00000398640 BAHCC1Q9P281 2608 aa9.09□□□□□ -0.95
PCDHA11-201ENST00000398640 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
PCDHA11-201ENST00000398640 PRR26Q8N8Z3 221 aa9.08□□□□□ -0.96
PCDHA11-201ENST00000398640 CYP4F30PQ9H0H9 118 aa9.05□□□□□ -0.96
PCDHA11-201ENST00000398640 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
PCDHA11-201ENST00000398640 A0A1W2PNM2 257 aa9.03□□□□□ -0.96
PCDHA11-201ENST00000398640 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
PCDHA11-201ENST00000398640 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
PCDHA11-201ENST00000398640 FAM104AQ969W3 186 aa8.99□□□□□ -0.97
PCDHA11-201ENST00000398640 PRRC2CQ9Y520 2896 aaKnown RBP8.98□□□□□ -0.97
PCDHA11-201ENST00000398640 AKAP13Q12802 2813 aa8.96□□□□□ -0.97
PCDHA11-201ENST00000398640 BRCA2P51587 3418 aa8.94□□□□□ -0.98
PCDHA11-201ENST00000398640 CDC42SE1Q9NRR8 79 aa8.93□□□□□ -0.98
PCDHA11-201ENST00000398640 H7BZZ5 65 aa8.92□□□□□ -0.98
PCDHA11-201ENST00000398640 MAST4O15021 2626 aa8.92□□□□□ -0.98
PCDHA11-201ENST00000398640 IGSF10Q6WRI0 2623 aa8.9□□□□□ -0.98
PCDHA11-201ENST00000398640 ATRQ13535 2644 aa8.89□□□□□ -0.99
PCDHA11-201ENST00000398640 Q5VSD8 79 aa8.88□□□□□ -0.99
PCDHA11-201ENST00000398640 PRUNE2Q8WUY3 3088 aa8.88□□□□□ -0.99
PCDHA11-201ENST00000398640 CAMK2N1Q7Z7J9 78 aa8.87□□□□□ -0.99
PCDHA11-201ENST00000398640 TNRC18O15417 2968 aaPredicted RBP8.86□□□□□ -0.99
PCDHA11-201ENST00000398640 MGAQ8IWI9 3026 aa8.86□□□□□ -0.99
PCDHA11-201ENST00000398640 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
PCDHA11-201ENST00000398640 BPTFQ12830 3046 aa8.83□□□□□ -1
PCDHA11-201ENST00000398640 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
PCDHA11-201ENST00000398640 CD164Q04900 197 aa8.8□□□□□ -1
PCDHA11-201ENST00000398640 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
PCDHA11-201ENST00000398640 UNC79Q9P2D8 2635 aa8.78□□□□□ -1
PCDHA11-201ENST00000398640 HRES1P13985 223 aa8.77□□□□□ -1.01
PCDHA11-201ENST00000398640 KRTAP1-5Q9BYS1 174 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms