RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 C9orf116Q5BN46 136 aaPredicted RBP9.09□□□□□ -0.95
SEC13-208ENST00000397109 H3BMG7 143 aa9.08□□□□□ -0.96
SEC13-208ENST00000397109 RPL13AP40429 203 aaKnown RBP9.08□□□□□ -0.96
SEC13-208ENST00000397109 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
SEC13-208ENST00000397109 ATXN8Q156A1 80 aa9.08□□□□□ -0.96
SEC13-208ENST00000397109 M0QXV9 152 aa9.07□□□□□ -0.96
SEC13-208ENST00000397109 TCL1BO95988 128 aa9.07□□□□□ -0.96
SEC13-208ENST00000397109 Q6ZRP5 223 aa9.07□□□□□ -0.96
SEC13-208ENST00000397109 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
SEC13-208ENST00000397109 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
SEC13-208ENST00000397109 H7C2G1 150 aa9.06□□□□□ -0.96
SEC13-208ENST00000397109 TRIAP1O43715 76 aa9.06□□□□□ -0.96
SEC13-208ENST00000397109 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
SEC13-208ENST00000397109 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
SEC13-208ENST00000397109 LINC01600Q96MT4 127 aa9.05□□□□□ -0.96
SEC13-208ENST00000397109 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
SEC13-208ENST00000397109 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
SEC13-208ENST00000397109 GAGE2EQ4V326 116 aa9.04□□□□□ -0.96
SEC13-208ENST00000397109 GAGE2DQ9UEU5 116 aa9.04□□□□□ -0.96
SEC13-208ENST00000397109 PRO0461Q9UI25 63 aa9.04□□□□□ -0.96
SEC13-208ENST00000397109 H0YGX0 51 aa9.02□□□□□ -0.97
SEC13-208ENST00000397109 K7ERU9 68 aa9.02□□□□□ -0.97
SEC13-208ENST00000397109 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.97
SEC13-208ENST00000397109 PHF5AQ7RTV0 110 aaKnown RBP9.02□□□□□ -0.97
SEC13-208ENST00000397109 LINC00337Q8N6G1 96 aa9.02□□□□□ -0.97
SEC13-208ENST00000397109 LST1O00453 97 aa9.01□□□□□ -0.97
SEC13-208ENST00000397109 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
SEC13-208ENST00000397109 TRBV10-2A0A0K0K1G8 114 aa9□□□□□ -0.97
SEC13-208ENST00000397109 OCIAD2Q56VL3 154 aa9□□□□□ -0.97
SEC13-208ENST00000397109 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
SEC13-208ENST00000397109 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
SEC13-208ENST00000397109 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
SEC13-208ENST00000397109 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
SEC13-208ENST00000397109 J3QR89 54 aa8.98□□□□□ -0.97
SEC13-208ENST00000397109 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
SEC13-208ENST00000397109 SLC25A20O43772 301 aa8.97□□□□□ -0.97
SEC13-208ENST00000397109 TRACP01848 142 aa8.97□□□□□ -0.97
SEC13-208ENST00000397109 C9orf129Q5T035 196 aaKnown RBP8.97□□□□□ -0.97
SEC13-208ENST00000397109 CBY1Q9Y3M2 126 aa8.97□□□□□ -0.97
SEC13-208ENST00000397109 H3BT86 120 aa8.96□□□□□ -0.97
SEC13-208ENST00000397109 C1orf137Q5JT78 98 aa8.96□□□□□ -0.97
SEC13-208ENST00000397109 SMIM11BQ8TCY0 68 aa8.96□□□□□ -0.97
SEC13-208ENST00000397109 A0A1B0GX51 115 aa8.96□□□□□ -0.98
SEC13-208ENST00000397109 C9JAW5 83 aa8.96□□□□□ -0.98
SEC13-208ENST00000397109 MT1HL1P0DM35 61 aa8.96□□□□□ -0.98
SEC13-208ENST00000397109 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.98
SEC13-208ENST00000397109 OR13C6PQ8NH95 151 aa8.96□□□□□ -0.98
SEC13-208ENST00000397109 UBE2BP63146 152 aa8.95□□□□□ -0.98
SEC13-208ENST00000397109 TEN1Q86WV5 123 aa8.95□□□□□ -0.98
SEC13-208ENST00000397109 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
SEC13-208ENST00000397109 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
SEC13-208ENST00000397109 ETDBQ3ZM63 59 aa8.94□□□□□ -0.98
SEC13-208ENST00000397109 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
SEC13-208ENST00000397109 CLEC2BQ92478 149 aa8.93□□□□□ -0.98
SEC13-208ENST00000397109 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
SEC13-208ENST00000397109 SNCGO76070 127 aa8.92□□□□□ -0.98
SEC13-208ENST00000397109 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
SEC13-208ENST00000397109 S100A7L2Q5SY68 101 aa8.92□□□□□ -0.98
SEC13-208ENST00000397109 IGLV6-57P01721 117 aa8.91□□□□□ -0.98
SEC13-208ENST00000397109 C22orf24Q9Y442 160 aa8.91□□□□□ -0.98
SEC13-208ENST00000397109 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
SEC13-208ENST00000397109 PPDPFLQ8WWR9 84 aa8.9□□□□□ -0.98
SEC13-208ENST00000397109 DIRC1Q969H9 104 aa8.9□□□□□ -0.98
SEC13-208ENST00000397109 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
SEC13-208ENST00000397109 M0R378 163 aa8.89□□□□□ -0.99
SEC13-208ENST00000397109 MTURNQ8N3F0 131 aa8.89□□□□□ -0.99
SEC13-208ENST00000397109 DNAL4O96015 105 aa8.88□□□□□ -0.99
SEC13-208ENST00000397109 VPREB1P12018 145 aa8.88□□□□□ -0.99
SEC13-208ENST00000397109 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
SEC13-208ENST00000397109 TNXBP22105 4242 aa8.87□□□□□ -0.99
SEC13-208ENST00000397109 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
SEC13-208ENST00000397109 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
SEC13-208ENST00000397109 Q8NDZ9 215 aa8.86□□□□□ -0.99
SEC13-208ENST00000397109 H0Y9J4 135 aa8.85□□□□□ -0.99
SEC13-208ENST00000397109 H3BQ85 93 aa8.85□□□□□ -0.99
SEC13-208ENST00000397109 NCR3O14931 201 aa8.85□□□□□ -0.99
SEC13-208ENST00000397109 NKAPP1Q8N9T2 125 aa8.84□□□□□ -0.99
SEC13-208ENST00000397109 FAM218AQ96MZ4 157 aa8.84□□□□□ -0.99
SEC13-208ENST00000397109 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
SEC13-208ENST00000397109 LINC00167Q96N53 147 aa8.83□□□□□ -1
SEC13-208ENST00000397109 TRAV23DV6A0A075B6W5 121 aa8.83□□□□□ -1
SEC13-208ENST00000397109 GHRHP01286 108 aa8.83□□□□□ -1
SEC13-208ENST00000397109 C6orf99Q4VX62 202 aa8.83□□□□□ -1
SEC13-208ENST00000397109 TRBV10-3A0A0K0K1G6 114 aa8.82□□□□□ -1
SEC13-208ENST00000397109 ZNF861PO60384 105 aa8.82□□□□□ -1
SEC13-208ENST00000397109 LINC00575Q6W349 94 aa8.8□□□□□ -1
SEC13-208ENST00000397109 VPS25Q9BRG1 176 aa8.8□□□□□ -1
SEC13-208ENST00000397109 ORMDL1Q9P0S3 153 aa8.8□□□□□ -1
SEC13-208ENST00000397109 RPL37AP8A6NKH3 93 aa8.79□□□□□ -1
SEC13-208ENST00000397109 TMEM256-PLSCR3K7ERE1 68 aa8.79□□□□□ -1
SEC13-208ENST00000397109 ZNF73O43830 326 aaPredicted RBP8.79□□□□□ -1
SEC13-208ENST00000397109 BCE1O60756 84 aa8.79□□□□□ -1
SEC13-208ENST00000397109 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
SEC13-208ENST00000397109 KCNQ1DNQ9H478 68 aa8.78□□□□□ -1
SEC13-208ENST00000397109 IGLV1-50A0A075B6I6 118 aa8.77□□□□□ -1
SEC13-208ENST00000397109 hADV29S1A0JD25 119 aa8.77□□□□□ -1
SEC13-208ENST00000397109 TEX49A0A1B0GTD5 131 aa8.77□□□□□ -1.01
SEC13-208ENST00000397109 ELOF1P60002 83 aaKnown RBP8.77□□□□□ -1.01
SEC13-208ENST00000397109 COX7BP24311 80 aa8.76□□□□□ -1.01
SEC13-208ENST00000397109 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 1405.7 ms