RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 RTL8CO15255 209 aa7.04□□□□□ -1.28
COL4A4-201ENST00000396625 MRPL34Q9BQ48 92 aaKnown RBP7.04□□□□□ -1.28
COL4A4-201ENST00000396625 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
COL4A4-201ENST00000396625 OBSCN-AS1Q96MR7 158 aa7.02□□□□□ -1.29
COL4A4-201ENST00000396625 FAM168BA1KXE4 195 aa7.01□□□□□ -1.29
COL4A4-201ENST00000396625 PRO3102Q9H379 93 aa7.01□□□□□ -1.29
COL4A4-201ENST00000396625 GVQW2A0A096LPI5 108 aaPredicted RBP7□□□□□ -1.29
COL4A4-201ENST00000396625 CDSNQ15517 529 aa6.99□□□□□ -1.29
COL4A4-201ENST00000396625 DSCR10P59022 87 aa6.99□□□□□ -1.29
COL4A4-201ENST00000396625 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
COL4A4-201ENST00000396625 COL4A2P08572 1712 aa6.99□□□□□ -1.29
COL4A4-201ENST00000396625 GCN1Q92616 2671 aaKnown RBP6.99□□□□□ -1.29
COL4A4-201ENST00000396625 CSNK1G2-AS1Q8NCQ2 148 aa6.98□□□□□ -1.29
COL4A4-201ENST00000396625 LINC00483Q53H64 154 aa6.98□□□□□ -1.29
COL4A4-201ENST00000396625 LINC00315P59091 139 aa6.98□□□□□ -1.29
COL4A4-201ENST00000396625 FLNAP21333 2647 aaKnown RBP6.97□□□□□ -1.29
COL4A4-201ENST00000396625 HELZ2Q9BYK8 2649 aaKnown RBP6.97□□□□□ -1.29
COL4A4-201ENST00000396625 C9orf92A6NGG3 77 aa6.97□□□□□ -1.29
COL4A4-201ENST00000396625 Q1T7F1 81 aa6.96□□□□□ -1.29
COL4A4-201ENST00000396625 A0A1B0GVX0 72 aa6.96□□□□□ -1.3
COL4A4-201ENST00000396625 H7BZZ5 65 aa6.96□□□□□ -1.3
COL4A4-201ENST00000396625 H3BS24 57 aa6.95□□□□□ -1.3
COL4A4-201ENST00000396625 ITPR3Q14573 2671 aa6.95□□□□□ -1.3
COL4A4-201ENST00000396625 H3BNG1 76 aa6.95□□□□□ -1.3
COL4A4-201ENST00000396625 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
COL4A4-201ENST00000396625 J3QL48 77 aa6.95□□□□□ -1.3
COL4A4-201ENST00000396625 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
COL4A4-201ENST00000396625 NBDYA0A0U1RRE5 68 aa6.93□□□□□ -1.3
COL4A4-201ENST00000396625 IGFL1Q6UW32 110 aa6.93□□□□□ -1.3
COL4A4-201ENST00000396625 EP400Q96L91 3159 aa6.92□□□□□ -1.3
COL4A4-201ENST00000396625 FAM104AQ969W3 186 aa6.92□□□□□ -1.3
COL4A4-201ENST00000396625 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
COL4A4-201ENST00000396625 KRTAP10-9P60411 292 aa6.91□□□□□ -1.3
COL4A4-201ENST00000396625 STAB2Q8WWQ8 2551 aa6.91□□□□□ -1.3
COL4A4-201ENST00000396625 CHD6Q8TD26 2715 aa6.91□□□□□ -1.3
COL4A4-201ENST00000396625 COL6A5A8TX70 2615 aa6.9□□□□□ -1.3
COL4A4-201ENST00000396625 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.31
COL4A4-201ENST00000396625 RBM12B-AS1Q9P1G2 102 aa6.9□□□□□ -1.31
COL4A4-201ENST00000396625 LITAFQ99732 161 aa6.89□□□□□ -1.31
COL4A4-201ENST00000396625 KCNQ1DNQ9H478 68 aa6.89□□□□□ -1.31
COL4A4-201ENST00000396625 LINC00588Q9Y4M8 146 aa6.89□□□□□ -1.31
COL4A4-201ENST00000396625 FLNBO75369 2602 aaKnown RBP6.88□□□□□ -1.31
COL4A4-201ENST00000396625 Q8N1X5 172 aa6.88□□□□□ -1.31
COL4A4-201ENST00000396625 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
COL4A4-201ENST00000396625 BAHCC1Q9P281 2608 aa6.87□□□□□ -1.31
COL4A4-201ENST00000396625 DNAH10OSP0CZ25 163 aa6.87□□□□□ -1.31
COL4A4-201ENST00000396625 ZNF575Q86XF7 245 aa6.87□□□□□ -1.31
COL4A4-201ENST00000396625 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
COL4A4-201ENST00000396625 UNC79Q9P2D8 2635 aa6.84□□□□□ -1.31
COL4A4-201ENST00000396625 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
COL4A4-201ENST00000396625 C10orf142B7Z368 130 aa6.84□□□□□ -1.32
COL4A4-201ENST00000396625 Q8NAQ8 132 aa6.83□□□□□ -1.32
COL4A4-201ENST00000396625 Q75L30 129 aa6.82□□□□□ -1.32
COL4A4-201ENST00000396625 KMT2BQ9UMN6 2715 aaPredicted RBP6.81□□□□□ -1.32
COL4A4-201ENST00000396625 A0A1W2PPR1 153 aa6.8□□□□□ -1.32
COL4A4-201ENST00000396625 ZNF861PO60384 105 aa6.8□□□□□ -1.32
COL4A4-201ENST00000396625 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
COL4A4-201ENST00000396625 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
COL4A4-201ENST00000396625 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
COL4A4-201ENST00000396625 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
COL4A4-201ENST00000396625 Q8N377 158 aa6.79□□□□□ -1.32
COL4A4-201ENST00000396625 TEX15Q9BXT5 2789 aa6.79□□□□□ -1.32
COL4A4-201ENST00000396625 C15orf56Q8N910 161 aa6.77□□□□□ -1.32
COL4A4-201ENST00000396625 A0A1B0GU33 70 aa6.77□□□□□ -1.33
COL4A4-201ENST00000396625 MAP1AP78559 2803 aaPredicted RBP6.75□□□□□ -1.33
COL4A4-201ENST00000396625 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
COL4A4-201ENST00000396625 ANAPC11Q9NYG5 84 aa6.74□□□□□ -1.33
COL4A4-201ENST00000396625 DNAH12Q6ZR08 3092 aa6.73□□□□□ -1.33
COL4A4-201ENST00000396625 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.34
COL4A4-201ENST00000396625 GOLGB1Q14789 3259 aaKnown RBP6.7□□□□□ -1.34
COL4A4-201ENST00000396625 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
COL4A4-201ENST00000396625 EIF4EBP3O60516 100 aaPredicted RBP6.7□□□□□ -1.34
COL4A4-201ENST00000396625 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
COL4A4-201ENST00000396625 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
COL4A4-201ENST00000396625 PRR26Q8N8Z3 221 aa6.69□□□□□ -1.34
COL4A4-201ENST00000396625 PRAC1Q96KF2 57 aa6.69□□□□□ -1.34
COL4A4-201ENST00000396625 SPRR4Q96PI1 79 aa6.68□□□□□ -1.34
COL4A4-201ENST00000396625 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
COL4A4-201ENST00000396625 IGLV7-43P04211 117 aa6.67□□□□□ -1.34
COL4A4-201ENST00000396625 SPINK7P58062 85 aa6.67□□□□□ -1.34
COL4A4-201ENST00000396625 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
COL4A4-201ENST00000396625 UTP20O75691 2785 aaKnown RBP6.67□□□□□ -1.34
COL4A4-201ENST00000396625 NSD1Q96L73 2696 aaPredicted RBP6.66□□□□□ -1.34
COL4A4-201ENST00000396625 TLX1NBP0CAT3 122 aa6.66□□□□□ -1.34
COL4A4-201ENST00000396625 SMR3BP02814 79 aaPredicted RBP6.65□□□□□ -1.34
COL4A4-201ENST00000396625 PRR34Q9NV39 138 aa6.65□□□□□ -1.34
COL4A4-201ENST00000396625 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.34
COL4A4-201ENST00000396625 APCP25054 2843 aa6.64□□□□□ -1.35
COL4A4-201ENST00000396625 FAM229BQ4G0N7 80 aa6.64□□□□□ -1.35
COL4A4-201ENST00000396625 Q6ZSA8 131 aa6.64□□□□□ -1.35
COL4A4-201ENST00000396625 CEP350Q5VT06 3117 aa6.64□□□□□ -1.35
COL4A4-201ENST00000396625 M0R2T5 61 aa6.64□□□□□ -1.35
COL4A4-201ENST00000396625 HRES1P13985 223 aa6.64□□□□□ -1.35
COL4A4-201ENST00000396625 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
COL4A4-201ENST00000396625 S4R3F8 94 aa6.63□□□□□ -1.35
COL4A4-201ENST00000396625 A0A1W2PNM2 257 aa6.62□□□□□ -1.35
COL4A4-201ENST00000396625 Q5XG85 94 aa6.62□□□□□ -1.35
COL4A4-201ENST00000396625 TEP1Q99973 2627 aaKnown RBP6.62□□□□□ -1.35
COL4A4-201ENST00000396625 A0A087WTM6 91 aa6.62□□□□□ -1.35
COL4A4-201ENST00000396625 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms