RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 H7BZZ5 65 aa9.32□□□□□ -0.92
COL4A3-202ENST00000396578 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
COL4A3-202ENST00000396578 CDC42SE1Q9NRR8 79 aa9.31□□□□□ -0.92
COL4A3-202ENST00000396578 OBSCN-AS1Q96MR7 158 aa9.3□□□□□ -0.92
COL4A3-202ENST00000396578 COX6B2Q6YFQ2 88 aa9.28□□□□□ -0.92
COL4A3-202ENST00000396578 LUZP6Q538Z0 58 aa9.27□□□□□ -0.93
COL4A3-202ENST00000396578 Q8N377 158 aa9.26□□□□□ -0.93
COL4A3-202ENST00000396578 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
COL4A3-202ENST00000396578 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
COL4A3-202ENST00000396578 FLG2Q5D862 2391 aaPredicted RBP9.25□□□□□ -0.93
COL4A3-202ENST00000396578 EP400Q96L91 3159 aa9.25□□□□□ -0.93
COL4A3-202ENST00000396578 USP24Q9UPU5 2620 aa9.23□□□□□ -0.93
COL4A3-202ENST00000396578 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
COL4A3-202ENST00000396578 ZNF861PO60384 105 aa9.22□□□□□ -0.93
COL4A3-202ENST00000396578 PRRC2CQ9Y520 2896 aaKnown RBP9.22□□□□□ -0.93
COL4A3-202ENST00000396578 J3QL48 77 aa9.21□□□□□ -0.94
COL4A3-202ENST00000396578 FAM104AQ969W3 186 aa9.2□□□□□ -0.94
COL4A3-202ENST00000396578 A0A0D9SG42 100 aa9.19□□□□□ -0.94
COL4A3-202ENST00000396578 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
COL4A3-202ENST00000396578 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
COL4A3-202ENST00000396578 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
COL4A3-202ENST00000396578 LINC01554Q52M75 96 aa9.18□□□□□ -0.94
COL4A3-202ENST00000396578 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
COL4A3-202ENST00000396578 CSNK1G2-AS1Q8NCQ2 148 aa9.17□□□□□ -0.94
COL4A3-202ENST00000396578 POLQO75417 2590 aa9.16□□□□□ -0.94
COL4A3-202ENST00000396578 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
COL4A3-202ENST00000396578 CEP295Q9C0D2 2601 aa9.16□□□□□ -0.94
COL4A3-202ENST00000396578 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
COL4A3-202ENST00000396578 KLK9Q2XQG4 91 aa9.15□□□□□ -0.94
COL4A3-202ENST00000396578 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
COL4A3-202ENST00000396578 Q1T7F1 81 aa9.13□□□□□ -0.95
COL4A3-202ENST00000396578 KRTAP24-1Q3LI83 254 aa9.13□□□□□ -0.95
COL4A3-202ENST00000396578 A0A0G2JQZ4 141 aa9.12□□□□□ -0.95
COL4A3-202ENST00000396578 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
COL4A3-202ENST00000396578 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
COL4A3-202ENST00000396578 Q8N1X5 172 aa9.09□□□□□ -0.95
COL4A3-202ENST00000396578 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
COL4A3-202ENST00000396578 ANAPC11Q9NYG5 84 aa9.06□□□□□ -0.96
COL4A3-202ENST00000396578 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
COL4A3-202ENST00000396578 SPRR4Q96PI1 79 aa9.04□□□□□ -0.96
COL4A3-202ENST00000396578 A0A087WTM6 91 aa9.03□□□□□ -0.96
COL4A3-202ENST00000396578 LINC00483Q53H64 154 aa9.03□□□□□ -0.96
COL4A3-202ENST00000396578 C9orf163Q8N9P6 203 aa9.02□□□□□ -0.97
COL4A3-202ENST00000396578 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.97
COL4A3-202ENST00000396578 A0A1W2PNM2 257 aa9.02□□□□□ -0.97
COL4A3-202ENST00000396578 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.97
COL4A3-202ENST00000396578 GOLGB1Q14789 3259 aaKnown RBP9.02□□□□□ -0.97
COL4A3-202ENST00000396578 OCR1Q9BZK8 76 aa9.01□□□□□ -0.97
COL4A3-202ENST00000396578 WIPF1O43516 503 aa9□□□□□ -0.97
COL4A3-202ENST00000396578 KRTAP10-11P60412 298 aa9□□□□□ -0.97
COL4A3-202ENST00000396578 Q75L30 129 aa9□□□□□ -0.97
COL4A3-202ENST00000396578 ZNF575Q86XF7 245 aa8.99□□□□□ -0.97
COL4A3-202ENST00000396578 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
COL4A3-202ENST00000396578 A0A1B0GU33 70 aa8.96□□□□□ -0.97
COL4A3-202ENST00000396578 C19orf73Q9NVV2 129 aa8.96□□□□□ -0.98
COL4A3-202ENST00000396578 K7EIL1 84 aa8.95□□□□□ -0.98
COL4A3-202ENST00000396578 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
COL4A3-202ENST00000396578 GIG44P09565 113 aaPredicted RBP8.95□□□□□ -0.98
COL4A3-202ENST00000396578 LINC00612Q8N6U2 182 aa8.95□□□□□ -0.98
COL4A3-202ENST00000396578 IGLV7-46A0A075B6I9 117 aa8.95□□□□□ -0.98
COL4A3-202ENST00000396578 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
COL4A3-202ENST00000396578 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
COL4A3-202ENST00000396578 DNAH12Q6ZR08 3092 aa8.92□□□□□ -0.98
COL4A3-202ENST00000396578 H3BS24 57 aa8.88□□□□□ -0.99
COL4A3-202ENST00000396578 HRES1P13985 223 aa8.85□□□□□ -0.99
COL4A3-202ENST00000396578 A0A0A0MQY5 61 aa8.85□□□□□ -0.99
COL4A3-202ENST00000396578 Q6ZSA8 131 aa8.85□□□□□ -0.99
COL4A3-202ENST00000396578 CASC10Q5T4H9 136 aa8.84□□□□□ -0.99
COL4A3-202ENST00000396578 FAM229BQ4G0N7 80 aa8.84□□□□□ -0.99
COL4A3-202ENST00000396578 DMAC1Q96GE9 116 aa8.84□□□□□ -0.99
COL4A3-202ENST00000396578 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
COL4A3-202ENST00000396578 AKAP13Q12802 2813 aa8.8□□□□□ -1
COL4A3-202ENST00000396578 Q8N9P0 234 aaPredicted RBP8.79□□□□□ -1
COL4A3-202ENST00000396578 KRTAP10-3P60369 221 aa8.79□□□□□ -1
COL4A3-202ENST00000396578 Q5XG85 94 aa8.79□□□□□ -1
COL4A3-202ENST00000396578 MGAM2Q2M2H8 2515 aa8.78□□□□□ -1
COL4A3-202ENST00000396578 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
COL4A3-202ENST00000396578 S4R3F8 94 aa8.76□□□□□ -1.01
COL4A3-202ENST00000396578 PRAC1Q96KF2 57 aa8.75□□□□□ -1.01
COL4A3-202ENST00000396578 EPG5Q9HCE0 2579 aa8.75□□□□□ -1.01
COL4A3-202ENST00000396578 Q5VV11 94 aa8.73□□□□□ -1.01
COL4A3-202ENST00000396578 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
COL4A3-202ENST00000396578 CEP350Q5VT06 3117 aa8.72□□□□□ -1.01
COL4A3-202ENST00000396578 A0A096LNT2 108 aa8.71□□□□□ -1.01
COL4A3-202ENST00000396578 M0R2T5 61 aa8.71□□□□□ -1.02
COL4A3-202ENST00000396578 ZCCHC13Q8WW36 166 aaKnown RBP8.71□□□□□ -1.02
COL4A3-202ENST00000396578 FLNAP21333 2647 aaKnown RBP8.7□□□□□ -1.02
COL4A3-202ENST00000396578 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
COL4A3-202ENST00000396578 C5orf42Q9H799 3197 aa8.68□□□□□ -1.02
COL4A3-202ENST00000396578 SPINK7P58062 85 aa8.67□□□□□ -1.02
COL4A3-202ENST00000396578 HECTD1Q9ULT8 2610 aa8.67□□□□□ -1.02
COL4A3-202ENST00000396578 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
COL4A3-202ENST00000396578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
COL4A3-202ENST00000396578 ITPR3Q14573 2671 aa8.63□□□□□ -1.03
COL4A3-202ENST00000396578 UTRNP46939 3433 aa8.63□□□□□ -1.03
COL4A3-202ENST00000396578 Q5W150 140 aa8.63□□□□□ -1.03
COL4A3-202ENST00000396578 R4GN34 69 aa8.62□□□□□ -1.03
COL4A3-202ENST00000396578 ROMO1P60602 79 aa8.62□□□□□ -1.03
COL4A3-202ENST00000396578 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
COL4A3-202ENST00000396578 TNP2Q05952 138 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms