RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
TRIM39-204ENST00000396548 FAM19A5Q7Z5A7 132 aaPredicted RBP8.03□□□□□ -1.12
TRIM39-204ENST00000396548 NKAPP1Q8N9T2 125 aa8.03□□□□□ -1.12
TRIM39-204ENST00000396548 LINC00167Q96N53 147 aa8.03□□□□□ -1.12
TRIM39-204ENST00000396548 RYR3Q15413 4870 aa8.03□□□□□ -1.12
TRIM39-204ENST00000396548 ATXN8Q156A1 80 aa8.03□□□□□ -1.12
TRIM39-204ENST00000396548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.03□□□□□ -1.12
TRIM39-204ENST00000396548 PKHD1P08F94 4074 aa8.03□□□□□ -1.12
TRIM39-204ENST00000396548 C6orf99Q4VX62 202 aa8.02□□□□□ -1.13
TRIM39-204ENST00000396548 MRPL55Q7Z7F7 128 aaKnown RBP8.02□□□□□ -1.13
TRIM39-204ENST00000396548 LINC00474Q9P2X8 69 aa8.02□□□□□ -1.13
TRIM39-204ENST00000396548 H0YGX0 51 aa8.02□□□□□ -1.13
TRIM39-204ENST00000396548 IGLV5-52A0A0A0MRZ9 124 aa8.02□□□□□ -1.13
TRIM39-204ENST00000396548 SMCPP49901 116 aaPredicted RBP8.02□□□□□ -1.13
TRIM39-204ENST00000396548 LINC01600Q96MT4 127 aa8.02□□□□□ -1.13
TRIM39-204ENST00000396548 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-204ENST00000396548 J3QR89 54 aa8.01□□□□□ -1.13
TRIM39-204ENST00000396548 A0A087WYN8 130 aa8.01□□□□□ -1.13
TRIM39-204ENST00000396548 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
TRIM39-204ENST00000396548 ZNF73O43830 326 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-204ENST00000396548 SPRR1AP35321 89 aa8.01□□□□□ -1.13
TRIM39-204ENST00000396548 TRACP01848 142 aa8□□□□□ -1.13
TRIM39-204ENST00000396548 F8W1H4 67 aa7.99□□□□□ -1.13
TRIM39-204ENST00000396548 M0QXV9 152 aa7.99□□□□□ -1.13
TRIM39-204ENST00000396548 SS18L2Q9UHA2 77 aa7.99□□□□□ -1.13
TRIM39-204ENST00000396548 ELOF1P60002 83 aaKnown RBP7.99□□□□□ -1.13
TRIM39-204ENST00000396548 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
TRIM39-204ENST00000396548 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
TRIM39-204ENST00000396548 PRYO14603 147 aa7.98□□□□□ -1.13
TRIM39-204ENST00000396548 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
TRIM39-204ENST00000396548 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
TRIM39-204ENST00000396548 A0A1B0GX51 115 aa7.96□□□□□ -1.13
TRIM39-204ENST00000396548 PHF5AQ7RTV0 110 aaKnown RBP7.96□□□□□ -1.13
TRIM39-204ENST00000396548 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.13
TRIM39-204ENST00000396548 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.14
TRIM39-204ENST00000396548 C9JAW5 83 aa7.96□□□□□ -1.14
TRIM39-204ENST00000396548 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
TRIM39-204ENST00000396548 A0A1B0GVY2 172 aa7.95□□□□□ -1.14
TRIM39-204ENST00000396548 LINC00336Q6ZUF6 198 aa7.95□□□□□ -1.14
TRIM39-204ENST00000396548 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
TRIM39-204ENST00000396548 Q6ZSA8 131 aa7.95□□□□□ -1.14
TRIM39-204ENST00000396548 B5MCH6 92 aa7.94□□□□□ -1.14
TRIM39-204ENST00000396548 SLC25A20O43772 301 aa7.94□□□□□ -1.14
TRIM39-204ENST00000396548 MT-ATP8P03928 68 aa7.94□□□□□ -1.14
TRIM39-204ENST00000396548 COX7BP24311 80 aa7.94□□□□□ -1.14
TRIM39-204ENST00000396548 KRTAP10-1P60331 282 aa7.93□□□□□ -1.14
TRIM39-204ENST00000396548 FAM30AQ9NZY2 134 aa7.93□□□□□ -1.14
TRIM39-204ENST00000396548 REG3GQ6UW15 175 aa7.92□□□□□ -1.14
TRIM39-204ENST00000396548 H3BT86 120 aa7.92□□□□□ -1.14
TRIM39-204ENST00000396548 ANKRD29Q8N6D5 301 aa7.92□□□□□ -1.14
TRIM39-204ENST00000396548 hADV29S1A0JD25 119 aa7.91□□□□□ -1.14
TRIM39-204ENST00000396548 Q6ZRX8 168 aa7.91□□□□□ -1.14
TRIM39-204ENST00000396548 Q9BRP9 147 aa7.91□□□□□ -1.14
TRIM39-204ENST00000396548 INAFM2P0DMQ5 153 aa7.89□□□□□ -1.15
TRIM39-204ENST00000396548 XGP55808 180 aa7.89□□□□□ -1.15
TRIM39-204ENST00000396548 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
TRIM39-204ENST00000396548 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
TRIM39-204ENST00000396548 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
TRIM39-204ENST00000396548 BAALC-AS2P0C853 105 aa7.88□□□□□ -1.15
TRIM39-204ENST00000396548 KRTAP13-1Q8IUC0 172 aa7.87□□□□□ -1.15
TRIM39-204ENST00000396548 DNAL4O96015 105 aa7.87□□□□□ -1.15
TRIM39-204ENST00000396548 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
TRIM39-204ENST00000396548 ETDCA0A1B0GVM5 59 aa7.86□□□□□ -1.15
TRIM39-204ENST00000396548 H0Y9J4 135 aa7.86□□□□□ -1.15
TRIM39-204ENST00000396548 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
TRIM39-204ENST00000396548 CIRBP-AS1Q8TBR5 109 aa7.86□□□□□ -1.15
TRIM39-204ENST00000396548 SMCR5Q8TEV8 140 aa7.86□□□□□ -1.15
TRIM39-204ENST00000396548 UBE2BP63146 152 aa7.86□□□□□ -1.15
TRIM39-204ENST00000396548 ORMDL1Q9P0S3 153 aa7.86□□□□□ -1.15
TRIM39-204ENST00000396548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.85□□□□□ -1.15
TRIM39-204ENST00000396548 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
TRIM39-204ENST00000396548 SMIM20Q8N5G0 67 aa7.85□□□□□ -1.15
TRIM39-204ENST00000396548 LINC01547P58512 204 aaPredicted RBP7.85□□□□□ -1.15
TRIM39-204ENST00000396548 Q6ZQY7 126 aa7.85□□□□□ -1.15
TRIM39-204ENST00000396548 OBSCN-AS1Q96MR7 158 aa7.85□□□□□ -1.15
TRIM39-204ENST00000396548 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
TRIM39-204ENST00000396548 ERC2-IT1O76042 136 aa7.84□□□□□ -1.15
TRIM39-204ENST00000396548 SCXQ7RTU7 201 aa7.84□□□□□ -1.15
TRIM39-204ENST00000396548 BCE1O60756 84 aa7.83□□□□□ -1.16
TRIM39-204ENST00000396548 SNCGO76070 127 aa7.83□□□□□ -1.16
TRIM39-204ENST00000396548 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
TRIM39-204ENST00000396548 TMEM256-PLSCR3K7ERE1 68 aa7.82□□□□□ -1.16
TRIM39-204ENST00000396548 PRLHP81277 87 aa7.82□□□□□ -1.16
TRIM39-204ENST00000396548 PSORS1C2Q9UIG4 136 aa7.82□□□□□ -1.16
TRIM39-204ENST00000396548 TEX49A0A1B0GTD5 131 aa7.81□□□□□ -1.16
TRIM39-204ENST00000396548 IGLV5-48A0A075B6I7 105 aa7.81□□□□□ -1.16
TRIM39-204ENST00000396548 H3BQ85 93 aa7.8□□□□□ -1.16
TRIM39-204ENST00000396548 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
TRIM39-204ENST00000396548 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
TRIM39-204ENST00000396548 Q8N377 158 aa7.79□□□□□ -1.16
TRIM39-204ENST00000396548 ST20-AS1Q8NBB2 130 aa7.79□□□□□ -1.16
TRIM39-204ENST00000396548 CCDC179H3BU77 68 aa7.79□□□□□ -1.16
TRIM39-204ENST00000396548 HAMPP81172 84 aa7.77□□□□□ -1.16
TRIM39-204ENST00000396548 UBE2AP49459 152 aa7.75□□□□□ -1.17
TRIM39-204ENST00000396548 C1orf137Q5JT78 98 aa7.74□□□□□ -1.17
TRIM39-204ENST00000396548 SMIM29Q86T20 159 aa7.74□□□□□ -1.17
TRIM39-204ENST00000396548 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
TRIM39-204ENST00000396548 GHRHP01286 108 aa7.74□□□□□ -1.17
TRIM39-204ENST00000396548 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
TRIM39-204ENST00000396548 SPRR1BP22528 89 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms