RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 RETNQ9HD89 108 aa6.59□□□□□ -1.35
TRIM39-203ENST00000396547 PDE6GP18545 87 aa6.59□□□□□ -1.36
TRIM39-203ENST00000396547 CAMK2N2Q96S95 79 aa6.58□□□□□ -1.36
TRIM39-203ENST00000396547 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
TRIM39-203ENST00000396547 TRRAPQ9Y4A5 3859 aa6.57□□□□□ -1.36
TRIM39-203ENST00000396547 FAM30AQ9NZY2 134 aa6.57□□□□□ -1.36
TRIM39-203ENST00000396547 TRBV7-4A0A0J9YYF1 115 aa6.57□□□□□ -1.36
TRIM39-203ENST00000396547 C9orf66Q5T8R8 295 aa6.55□□□□□ -1.36
TRIM39-203ENST00000396547 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
TRIM39-203ENST00000396547 FUSP35637 526 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRIM39-203ENST00000396547 PRR4Q16378 134 aa6.55□□□□□ -1.36
TRIM39-203ENST00000396547 A0A0J9YWU9 116 aa6.55□□□□□ -1.36
TRIM39-203ENST00000396547 BCE1O60756 84 aa6.55□□□□□ -1.36
TRIM39-203ENST00000396547 IGHV4-30-4P0DP06 118 aa6.55□□□□□ -1.36
TRIM39-203ENST00000396547 LINC00612Q8N6U2 182 aa6.54□□□□□ -1.36
TRIM39-203ENST00000396547 STAB1Q9NY15 2570 aa6.54□□□□□ -1.36
TRIM39-203ENST00000396547 EPM2AB3EWF7 344 aa6.54□□□□□ -1.36
TRIM39-203ENST00000396547 PRYO14603 147 aa6.53□□□□□ -1.36
TRIM39-203ENST00000396547 NDUFC1O43677 76 aa6.53□□□□□ -1.36
TRIM39-203ENST00000396547 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
TRIM39-203ENST00000396547 KRTAP10-3P60369 221 aa6.53□□□□□ -1.36
TRIM39-203ENST00000396547 LYRM9A8MSI8 78 aa6.53□□□□□ -1.36
TRIM39-203ENST00000396547 IGKV4-1P06312 121 aa6.53□□□□□ -1.36
TRIM39-203ENST00000396547 Q6ZRU5 148 aa6.53□□□□□ -1.36
TRIM39-203ENST00000396547 KPRPQ5T749 579 aaPredicted RBP6.52□□□□□ -1.37
TRIM39-203ENST00000396547 LELP1Q5T871 98 aa6.52□□□□□ -1.37
TRIM39-203ENST00000396547 PKD1L1Q8TDX9 2849 aa6.52□□□□□ -1.37
TRIM39-203ENST00000396547 VPREB1P12018 145 aa6.51□□□□□ -1.37
TRIM39-203ENST00000396547 WFDC10BQ8IUB3 73 aa6.51□□□□□ -1.37
TRIM39-203ENST00000396547 COL6A5A8TX70 2615 aa6.51□□□□□ -1.37
TRIM39-203ENST00000396547 RPL37AP8A6NKH3 93 aa6.51□□□□□ -1.37
TRIM39-203ENST00000396547 SMIM29Q86T20 159 aa6.51□□□□□ -1.37
TRIM39-203ENST00000396547 M0R378 163 aa6.5□□□□□ -1.37
TRIM39-203ENST00000396547 SPART-AS1P0CW21 52 aa6.49□□□□□ -1.37
TRIM39-203ENST00000396547 IGKV2D-24A0A075B6R9 120 aa6.49□□□□□ -1.37
TRIM39-203ENST00000396547 H3BQ85 93 aa6.49□□□□□ -1.37
TRIM39-203ENST00000396547 LINC00528Q8N1L1 170 aa6.49□□□□□ -1.37
TRIM39-203ENST00000396547 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
TRIM39-203ENST00000396547 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
TRIM39-203ENST00000396547 ESRGQ1W209 222 aa6.48□□□□□ -1.37
TRIM39-203ENST00000396547 NKAPP1Q8N9T2 125 aa6.48□□□□□ -1.37
TRIM39-203ENST00000396547 A0A0G2JQZ4 141 aa6.47□□□□□ -1.37
TRIM39-203ENST00000396547 A0A1W2PNN7 141 aa6.47□□□□□ -1.37
TRIM39-203ENST00000396547 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
TRIM39-203ENST00000396547 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
TRIM39-203ENST00000396547 Q6ZRP5 223 aa6.47□□□□□ -1.37
TRIM39-203ENST00000396547 PRR34Q9NV39 138 aa6.47□□□□□ -1.37
TRIM39-203ENST00000396547 PSPHP1O15172 72 aa6.46□□□□□ -1.38
TRIM39-203ENST00000396547 APOC4P55056 127 aa6.46□□□□□ -1.38
TRIM39-203ENST00000396547 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
TRIM39-203ENST00000396547 Q8N377 158 aa6.45□□□□□ -1.38
TRIM39-203ENST00000396547 GVQW2A0A096LPI5 108 aaPredicted RBP6.45□□□□□ -1.38
TRIM39-203ENST00000396547 EGFEM1PQ0D2K5 195 aa6.45□□□□□ -1.38
TRIM39-203ENST00000396547 Q6ZTC4 211 aa6.45□□□□□ -1.38
TRIM39-203ENST00000396547 Q8NAQ8 132 aa6.45□□□□□ -1.38
TRIM39-203ENST00000396547 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
TRIM39-203ENST00000396547 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
TRIM39-203ENST00000396547 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
TRIM39-203ENST00000396547 FAM168BA1KXE4 195 aa6.43□□□□□ -1.38
TRIM39-203ENST00000396547 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
TRIM39-203ENST00000396547 A0A1W2PNM2 257 aa6.42□□□□□ -1.38
TRIM39-203ENST00000396547 C15orf56Q8N910 161 aa6.42□□□□□ -1.38
TRIM39-203ENST00000396547 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
TRIM39-203ENST00000396547 ERC2-IT1O76042 136 aa6.41□□□□□ -1.38
TRIM39-203ENST00000396547 ETDCA0A1B0GVM5 59 aa6.41□□□□□ -1.38
TRIM39-203ENST00000396547 C1orf64Q8NEQ6 169 aa6.41□□□□□ -1.38
TRIM39-203ENST00000396547 K7EQZ3 153 aa6.41□□□□□ -1.38
TRIM39-203ENST00000396547 UBE2BP63146 152 aa6.41□□□□□ -1.38
TRIM39-203ENST00000396547 CD164Q04900 197 aa6.41□□□□□ -1.38
TRIM39-203ENST00000396547 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
TRIM39-203ENST00000396547 FBN3Q75N90 2809 aa6.39□□□□□ -1.39
TRIM39-203ENST00000396547 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
TRIM39-203ENST00000396547 Q9BRP9 147 aa6.37□□□□□ -1.39
TRIM39-203ENST00000396547 NOTCH1P46531 2555 aa6.37□□□□□ -1.39
TRIM39-203ENST00000396547 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.37□□□□□ -1.39
TRIM39-203ENST00000396547 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
TRIM39-203ENST00000396547 DSCR10P59022 87 aa6.36□□□□□ -1.39
TRIM39-203ENST00000396547 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
TRIM39-203ENST00000396547 IGLV5-48A0A075B6I7 105 aa6.35□□□□□ -1.39
TRIM39-203ENST00000396547 RPL37AP61513 92 aaKnown RBP6.35□□□□□ -1.39
TRIM39-203ENST00000396547 Q6ZRX8 168 aa6.34□□□□□ -1.39
TRIM39-203ENST00000396547 Q8NBF4 154 aa6.34□□□□□ -1.39
TRIM39-203ENST00000396547 TENM3Q9P273 2699 aa6.34□□□□□ -1.39
TRIM39-203ENST00000396547 CASC10Q5T4H9 136 aa6.34□□□□□ -1.4
TRIM39-203ENST00000396547 LINC00208Q96KT6 92 aa6.34□□□□□ -1.4
TRIM39-203ENST00000396547 DHRS4-AS1Q9P1J3 65 aa6.34□□□□□ -1.4
TRIM39-203ENST00000396547 A8MUN3 132 aa6.33□□□□□ -1.4
TRIM39-203ENST00000396547 C11orf45Q8TAV5 145 aa6.33□□□□□ -1.4
TRIM39-203ENST00000396547 PSCAO43653 123 aa6.33□□□□□ -1.4
TRIM39-203ENST00000396547 OXLD1Q5BKU9 147 aa6.33□□□□□ -1.4
TRIM39-203ENST00000396547 NBEAL1Q6ZS30 2694 aa6.33□□□□□ -1.4
TRIM39-203ENST00000396547 TRAV22A0A0B4J277 110 aa6.32□□□□□ -1.4
TRIM39-203ENST00000396547 A8MU10 97 aa6.32□□□□□ -1.4
TRIM39-203ENST00000396547 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
TRIM39-203ENST00000396547 PRR15Q8IV56 129 aa6.32□□□□□ -1.4
TRIM39-203ENST00000396547 A0A096LNI7 61 aa6.32□□□□□ -1.4
TRIM39-203ENST00000396547 A0A087WSZ3 146 aa6.31□□□□□ -1.4
TRIM39-203ENST00000396547 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
TRIM39-203ENST00000396547 MGAM2Q2M2H8 2515 aa6.31□□□□□ -1.4
TRIM39-203ENST00000396547 LINC00476Q8WZB0 136 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms