RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CR1P17927 2039 aa5.88□□□□□ -1.47
NDE1-202ENST00000396355 CASC2Q6XLA1 102 aa5.87□□□□□ -1.47
NDE1-202ENST00000396355 IGLV1-40P01703 118 aa5.87□□□□□ -1.47
NDE1-202ENST00000396355 IGHV4-30-4P0DP06 118 aa5.87□□□□□ -1.47
NDE1-202ENST00000396355 B9D2Q9BPU9 175 aa5.87□□□□□ -1.47
NDE1-202ENST00000396355 A0A096LNT2 108 aa5.87□□□□□ -1.47
NDE1-202ENST00000396355 LOC100131303A0A0U1RQF7 123 aa5.86□□□□□ -1.47
NDE1-202ENST00000396355 K7EQD1 137 aa5.86□□□□□ -1.47
NDE1-202ENST00000396355 K7EQG2 157 aa5.86□□□□□ -1.47
NDE1-202ENST00000396355 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
NDE1-202ENST00000396355 Q6ZRP5 223 aa5.86□□□□□ -1.47
NDE1-202ENST00000396355 Q6ZRU5 148 aa5.86□□□□□ -1.47
NDE1-202ENST00000396355 LCA10Q71F78 164 aa5.86□□□□□ -1.47
NDE1-202ENST00000396355 CXCL6P80162 114 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 CD164L2Q6UWJ8 174 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 Q6ZQT0 140 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 C7orf65Q6ZTY9 151 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 KLLNB2CW77 178 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 NDUFB1O75438 58 aa5.85□□□□□ -1.47
NDE1-202ENST00000396355 RETNLBQ9BQ08 111 aa5.84□□□□□ -1.47
NDE1-202ENST00000396355 CDC42SE2Q9NRR3 84 aa5.84□□□□□ -1.47
NDE1-202ENST00000396355 A0A096LNI7 61 aa5.84□□□□□ -1.47
NDE1-202ENST00000396355 ETDCA0A1B0GVM5 59 aa5.84□□□□□ -1.47
NDE1-202ENST00000396355 H3BUA1 57 aa5.84□□□□□ -1.47
NDE1-202ENST00000396355 C18orf65Q6ZTR6 163 aa5.83□□□□□ -1.48
NDE1-202ENST00000396355 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
NDE1-202ENST00000396355 H0Y9J4 135 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 BCE1O60756 84 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 REG3AQ06141 175 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 LINC01600Q96MT4 127 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 IGLV5-39A0A0G2JS06 123 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
NDE1-202ENST00000396355 TRBV7-4A0A0J9YYF1 115 aa5.81□□□□□ -1.48
NDE1-202ENST00000396355 C10orf25Q5T742 122 aa5.81□□□□□ -1.48
NDE1-202ENST00000396355 C16orf90A8MZG2 172 aa5.8□□□□□ -1.48
NDE1-202ENST00000396355 C22orf24Q9Y442 160 aa5.8□□□□□ -1.48
NDE1-202ENST00000396355 GYPEP15421 78 aa5.8□□□□□ -1.48
NDE1-202ENST00000396355 PSCAO43653 123 aa5.79□□□□□ -1.48
NDE1-202ENST00000396355 LINC00588Q9Y4M8 146 aa5.79□□□□□ -1.48
NDE1-202ENST00000396355 NBEAL2Q6ZNJ1 2754 aa5.78□□□□□ -1.48
NDE1-202ENST00000396355 UNQ6190/PRO20217Q6UXQ8 127 aa5.78□□□□□ -1.48
NDE1-202ENST00000396355 TENM1Q9UKZ4 2725 aa5.78□□□□□ -1.48
NDE1-202ENST00000396355 DEFB4AO15263 64 aa5.78□□□□□ -1.48
NDE1-202ENST00000396355 CAMK2N2Q96S95 79 aa5.78□□□□□ -1.48
NDE1-202ENST00000396355 H0Y9P7 68 aa5.77□□□□□ -1.49
NDE1-202ENST00000396355 LINC00959A0A1B0GUT2 108 aa5.76□□□□□ -1.49
NDE1-202ENST00000396355 Q1T7F1 81 aa5.76□□□□□ -1.49
NDE1-202ENST00000396355 FAM104AQ969W3 186 aa5.76□□□□□ -1.49
NDE1-202ENST00000396355 EPM2AB3EWF7 344 aa5.76□□□□□ -1.49
NDE1-202ENST00000396355 CHCHD10Q8WYQ3 142 aaPredicted RBP5.76□□□□□ -1.49
NDE1-202ENST00000396355 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
NDE1-202ENST00000396355 Q6YL49 198 aa5.75□□□□□ -1.49
NDE1-202ENST00000396355 Q6ZTC4 211 aa5.75□□□□□ -1.49
NDE1-202ENST00000396355 ST20-AS1Q8NBB2 130 aa5.75□□□□□ -1.49
NDE1-202ENST00000396355 ZNF702PQ9H963 129 aa5.75□□□□□ -1.49
NDE1-202ENST00000396355 MAP6D1Q9H9H5 199 aa5.75□□□□□ -1.49
NDE1-202ENST00000396355 CDK2AP2O75956 126 aa5.75□□□□□ -1.49
NDE1-202ENST00000396355 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
NDE1-202ENST00000396355 ANK3Q12955 4377 aaKnown RBP5.73□□□□□ -1.49
NDE1-202ENST00000396355 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.73□□□□□ -1.49
NDE1-202ENST00000396355 Q5VV11 94 aa5.73□□□□□ -1.49
NDE1-202ENST00000396355 H3BQ85 93 aa5.73□□□□□ -1.49
NDE1-202ENST00000396355 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
NDE1-202ENST00000396355 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
NDE1-202ENST00000396355 C1orf137Q5JT78 98 aa5.72□□□□□ -1.49
NDE1-202ENST00000396355 IGLV5-45A0A087WSX0 123 aa5.72□□□□□ -1.49
NDE1-202ENST00000396355 LINC00313P59037 77 aa5.72□□□□□ -1.49
NDE1-202ENST00000396355 DEFB114Q30KQ6 69 aa5.72□□□□□ -1.49
NDE1-202ENST00000396355 RPL37AP8A6NKH3 93 aa5.72□□□□□ -1.49
NDE1-202ENST00000396355 IGLV8-61A0A075B6I0 122 aa5.71□□□□□ -1.49
NDE1-202ENST00000396355 LOC110117498A0A087WWA1 95 aa5.71□□□□□ -1.5
NDE1-202ENST00000396355 OBSCN-AS1Q96MR7 158 aa5.7□□□□□ -1.5
NDE1-202ENST00000396355 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
NDE1-202ENST00000396355 IGHV3OR16-9A0A0B4J2B5 98 aa5.7□□□□□ -1.5
NDE1-202ENST00000396355 COA5Q86WW8 74 aa5.7□□□□□ -1.5
NDE1-202ENST00000396355 PRR26Q8N8Z3 221 aa5.7□□□□□ -1.5
NDE1-202ENST00000396355 OCR1Q9BZK8 76 aa5.7□□□□□ -1.5
NDE1-202ENST00000396355 DEFB135Q30KP9 77 aa5.69□□□□□ -1.5
NDE1-202ENST00000396355 C4orf3Q8WVX3 66 aa5.69□□□□□ -1.5
NDE1-202ENST00000396355 CYP4F30PQ9H0H9 118 aa5.69□□□□□ -1.5
NDE1-202ENST00000396355 K7EQZ3 153 aa5.69□□□□□ -1.5
NDE1-202ENST00000396355 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
NDE1-202ENST00000396355 Q8IZM0 81 aa5.68□□□□□ -1.5
NDE1-202ENST00000396355 KPRPQ5T749 579 aaPredicted RBP5.68□□□□□ -1.5
NDE1-202ENST00000396355 A0A087WSZ3 146 aa5.67□□□□□ -1.5
NDE1-202ENST00000396355 RPL37AP61513 92 aaKnown RBP5.67□□□□□ -1.5
NDE1-202ENST00000396355 IGKV2D-24A0A075B6R9 120 aa5.67□□□□□ -1.5
NDE1-202ENST00000396355 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
NDE1-202ENST00000396355 VWFP04275 2813 aa5.67□□□□□ -1.5
NDE1-202ENST00000396355 KIAA0087Q14695 138 aa5.67□□□□□ -1.5
NDE1-202ENST00000396355 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
NDE1-202ENST00000396355 WWC2-AS2Q96NR7 200 aa5.66□□□□□ -1.5
NDE1-202ENST00000396355 A0A0G2JQZ4 141 aa5.66□□□□□ -1.5
NDE1-202ENST00000396355 A0A1W2PNN7 141 aa5.66□□□□□ -1.5
NDE1-202ENST00000396355 ADM2Q7Z4H4 148 aa5.66□□□□□ -1.5
NDE1-202ENST00000396355 ODF3L2Q3SX64 289 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms