RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.99□□□□□ -1.13
CXCL12-205ENST00000395794 C3orf22Q8N5N4 141 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BHQ93079 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BNQ99877 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BMQ99879 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 NDUFC2O95298 119 aa7.98□□□□□ -1.13
CXCL12-205ENST00000395794 SPAG11AQ6PDA7 123 aa7.98□□□□□ -1.13
CXCL12-205ENST00000395794 A0A0J9YXY3 114 aa7.97□□□□□ -1.13
CXCL12-205ENST00000395794 KRTAP4-16G5E9R7 235 aaPredicted RBP7.97□□□□□ -1.13
CXCL12-205ENST00000395794 B5MCH6 92 aa7.96□□□□□ -1.14
CXCL12-205ENST00000395794 NPC2P61916 151 aa7.96□□□□□ -1.14
CXCL12-205ENST00000395794 PET117Q6UWS5 81 aa7.96□□□□□ -1.14
CXCL12-205ENST00000395794 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
CXCL12-205ENST00000395794 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.14
CXCL12-205ENST00000395794 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
CXCL12-205ENST00000395794 JOSD1Q15040 202 aaPredicted RBP7.95□□□□□ -1.14
CXCL12-205ENST00000395794 KRTAP4-9Q9BYQ8 210 aa7.95□□□□□ -1.14
CXCL12-205ENST00000395794 TRAV23DV6A0A075B6W5 121 aa7.94□□□□□ -1.14
CXCL12-205ENST00000395794 IGLV6-57P01721 117 aa7.94□□□□□ -1.14
CXCL12-205ENST00000395794 ADAMTSL4-AS1Q5T5F5 129 aa7.94□□□□□ -1.14
CXCL12-205ENST00000395794 LINC01545Q5VT33 79 aa7.94□□□□□ -1.14
CXCL12-205ENST00000395794 GAGE2AQ6NT46 116 aa7.94□□□□□ -1.14
CXCL12-205ENST00000395794 HINT1P49773 126 aaPredicted RBP7.93□□□□□ -1.14
CXCL12-205ENST00000395794 Q6ZRX8 168 aa7.93□□□□□ -1.14
CXCL12-205ENST00000395794 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
CXCL12-205ENST00000395794 LINC00483Q53H64 154 aa7.92□□□□□ -1.14
CXCL12-205ENST00000395794 SOSTDC1Q6X4U4 206 aa7.92□□□□□ -1.14
CXCL12-205ENST00000395794 Q8NBF4 154 aa7.92□□□□□ -1.14
CXCL12-205ENST00000395794 ZNF815PA8K554 130 aa7.91□□□□□ -1.14
CXCL12-205ENST00000395794 ZNF73O43830 326 aaPredicted RBP7.91□□□□□ -1.14
CXCL12-205ENST00000395794 TIMM17BO60830 172 aa7.91□□□□□ -1.14
CXCL12-205ENST00000395794 KRTDAPP60985 99 aa7.91□□□□□ -1.14
CXCL12-205ENST00000395794 CDIP1Q9H305 208 aa7.91□□□□□ -1.14
CXCL12-205ENST00000395794 C20orf202A1L168 122 aa7.9□□□□□ -1.14
CXCL12-205ENST00000395794 ERC2-IT1O76042 136 aa7.9□□□□□ -1.14
CXCL12-205ENST00000395794 C3orf79P0CE67 100 aa7.9□□□□□ -1.14
CXCL12-205ENST00000395794 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
CXCL12-205ENST00000395794 LINC00308Q8TCZ7 52 aa7.9□□□□□ -1.14
CXCL12-205ENST00000395794 SPANXCQ9NY87 97 aa7.9□□□□□ -1.14
CXCL12-205ENST00000395794 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
CXCL12-205ENST00000395794 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
CXCL12-205ENST00000395794 SPINK1P00995 79 aa7.89□□□□□ -1.15
CXCL12-205ENST00000395794 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
CXCL12-205ENST00000395794 Q9BRP9 147 aa7.89□□□□□ -1.15
CXCL12-205ENST00000395794 MOBPQ13875 183 aa7.88□□□□□ -1.15
CXCL12-205ENST00000395794 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
CXCL12-205ENST00000395794 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
CXCL12-205ENST00000395794 SSBP3-AS1Q7Z2R9 100 aa7.87□□□□□ -1.15
CXCL12-205ENST00000395794 LITAFQ99732 161 aa7.87□□□□□ -1.15
CXCL12-205ENST00000395794 AKR1D1P51857 326 aa7.86□□□□□ -1.15
CXCL12-205ENST00000395794 SCGB1D4Q6XE38 83 aa7.86□□□□□ -1.15
CXCL12-205ENST00000395794 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
CXCL12-205ENST00000395794 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
CXCL12-205ENST00000395794 COPS9Q8WXC6 57 aa7.86□□□□□ -1.15
CXCL12-205ENST00000395794 SPANXDQ9BXN6 97 aa7.86□□□□□ -1.15
CXCL12-205ENST00000395794 C5orf52A6NGY3 159 aa7.85□□□□□ -1.15
CXCL12-205ENST00000395794 C9orf153Q5TBE3 101 aa7.84□□□□□ -1.15
CXCL12-205ENST00000395794 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
CXCL12-205ENST00000395794 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
CXCL12-205ENST00000395794 MUC2Q02817 5179 aa7.83□□□□□ -1.16
CXCL12-205ENST00000395794 SLC25A34Q6PIV7 304 aa7.82□□□□□ -1.16
CXCL12-205ENST00000395794 RPS29P62273 56 aaKnown RBP7.81□□□□□ -1.16
CXCL12-205ENST00000395794 ST20-AS1Q8NBB2 130 aa7.81□□□□□ -1.16
CXCL12-205ENST00000395794 KRTAP4-2Q9BYR5 136 aa7.81□□□□□ -1.16
CXCL12-205ENST00000395794 IFITM1P13164 125 aa7.8□□□□□ -1.16
CXCL12-205ENST00000395794 COX7BP24311 80 aa7.8□□□□□ -1.16
CXCL12-205ENST00000395794 Q6ZVH6 145 aa7.8□□□□□ -1.16
CXCL12-205ENST00000395794 ATOH7Q8N100 152 aa7.8□□□□□ -1.16
CXCL12-205ENST00000395794 SLC25A20O43772 301 aa7.79□□□□□ -1.16
CXCL12-205ENST00000395794 GHRHP01286 108 aa7.79□□□□□ -1.16
CXCL12-205ENST00000395794 SNRPEP62304 92 aaKnown RBP7.79□□□□□ -1.16
CXCL12-205ENST00000395794 C6orf99Q4VX62 202 aa7.79□□□□□ -1.16
CXCL12-205ENST00000395794 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
CXCL12-205ENST00000395794 A6NDN8 102 aa7.77□□□□□ -1.17
CXCL12-205ENST00000395794 S100A2P29034 98 aa7.77□□□□□ -1.17
CXCL12-205ENST00000395794 ELOF1P60002 83 aaKnown RBP7.77□□□□□ -1.17
CXCL12-205ENST00000395794 LAMTOR3Q9UHA4 124 aa7.77□□□□□ -1.17
CXCL12-205ENST00000395794 TAL2Q16559 108 aa7.76□□□□□ -1.17
CXCL12-205ENST00000395794 Q8N377 158 aa7.76□□□□□ -1.17
CXCL12-205ENST00000395794 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
CXCL12-205ENST00000395794 SPRR1BP22528 89 aa7.75□□□□□ -1.17
CXCL12-205ENST00000395794 PCP2Q8IVA1 136 aa7.75□□□□□ -1.17
CXCL12-205ENST00000395794 MUSTN1Q8IVN3 82 aa7.75□□□□□ -1.17
CXCL12-205ENST00000395794 HSBP1L1C9JCN9 74 aa7.74□□□□□ -1.17
CXCL12-205ENST00000395794 KRTAP13-3Q3SY46 172 aa7.74□□□□□ -1.17
CXCL12-205ENST00000395794 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
CXCL12-205ENST00000395794 A0A1B0GWB2 263 aa7.73□□□□□ -1.17
CXCL12-205ENST00000395794 S100A6P06703 90 aa7.73□□□□□ -1.17
CXCL12-205ENST00000395794 S100A1P23297 94 aa7.73□□□□□ -1.17
CXCL12-205ENST00000395794 TRAV13-2A0A0B4J235 113 aa7.72□□□□□ -1.17
CXCL12-205ENST00000395794 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
CXCL12-205ENST00000395794 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
CXCL12-205ENST00000395794 LIMD2Q9BT23 127 aa7.72□□□□□ -1.17
CXCL12-205ENST00000395794 A4D1N5 150 aa7.71□□□□□ -1.18
CXCL12-205ENST00000395794 HIST1H2BLQ99880 126 aa7.71□□□□□ -1.18
CXCL12-205ENST00000395794 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
CXCL12-205ENST00000395794 NHP2Q9NX24 153 aaKnown RBP7.7□□□□□ -1.18
CXCL12-205ENST00000395794 Q1RN00 199 aa7.69□□□□□ -1.18
CXCL12-205ENST00000395794 PRO1933Q9H354 126 aa7.69□□□□□ -1.18
CXCL12-205ENST00000395794 MUC17Q685J3 4493 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms