RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 PPYP01298 95 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 HIST1H1DP16402 221 aaKnown RBP2.92□□□□□ -1.94
AP3S1-202ENST00000395548 XAF1Q6GPH4 301 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 ZNF818PQ6ZRF7 136 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 TMEM136Q6ZRR5 245 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 C8orf59Q8N0T1 100 aaPredicted RBP2.92□□□□□ -1.94
AP3S1-202ENST00000395548 ATOH7Q8N100 152 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 TSKUQ8WUA8 353 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 CIB3Q96Q77 187 aaPredicted RBP2.92□□□□□ -1.94
AP3S1-202ENST00000395548 SLC50A1Q9BRV3 221 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 ZFP30Q9Y2G7 519 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 TMEM262E9PQX1 116 aa2.91□□□□□ -1.94
AP3S1-202ENST00000395548 EDF1O60869 148 aaKnown RBP2.91□□□□□ -1.94
AP3S1-202ENST00000395548 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
AP3S1-202ENST00000395548 PYYP10082 97 aa2.91□□□□□ -1.94
AP3S1-202ENST00000395548 MGST1P10620 155 aaKnown RBP2.91□□□□□ -1.94
AP3S1-202ENST00000395548 TEX261Q6UWH6 196 aa2.91□□□□□ -1.94
AP3S1-202ENST00000395548 Q8N9L7 120 aa2.91□□□□□ -1.94
AP3S1-202ENST00000395548 M0R2P5 195 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 FXYD4P59646 89 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 PKIAP61925 76 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 CLLU1Q5K131 121 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 KCNRGQ8N5I3 272 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 LINC00304Q8N9R0 145 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 TPRKBQ9Y3C4 175 aa2.9□□□□□ -1.95
AP3S1-202ENST00000395548 TMEM218A2RU14 115 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 IFITM5A6NNB3 132 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 C17orf112F2Z3M2 114 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 NMBP08949 121 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 TMEM258P61165 79 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 Q6ZQT0 140 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 GTF2H5Q6ZYL4 71 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 COPS9Q8WXC6 57 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 CLEC2BQ92478 149 aa2.89□□□□□ -1.95
AP3S1-202ENST00000395548 TRBV20-1A0A075B6N2 111 aa2.88□□□□□ -1.95
AP3S1-202ENST00000395548 SPANXN5Q5MJ07 72 aa2.88□□□□□ -1.95
AP3S1-202ENST00000395548 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
AP3S1-202ENST00000395548 TRGV9Q99603 122 aa2.88□□□□□ -1.95
AP3S1-202ENST00000395548 IGLV4-60A0A075B6I1 120 aa2.87□□□□□ -1.95
AP3S1-202ENST00000395548 FNDC10F2Z333 226 aa2.87□□□□□ -1.95
AP3S1-202ENST00000395548 M0R143 59 aa2.87□□□□□ -1.95
AP3S1-202ENST00000395548 SPANXDQ9BXN6 97 aa2.87□□□□□ -1.95
AP3S1-202ENST00000395548 C14orf132Q9NPU4 83 aa2.87□□□□□ -1.95
AP3S1-202ENST00000395548 LSM2Q9Y333 95 aaKnown RBP2.87□□□□□ -1.95
AP3S1-202ENST00000395548 R4GN34 69 aa2.87□□□□□ -1.95
AP3S1-202ENST00000395548 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 COLCA2A8K830 154 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 HMSDA8MTL9 139 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 CCDC179H3BU77 68 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 TRACP01848 142 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 PMP2P02689 132 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 CD3DP04234 171 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 CKS2P33552 79 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 LINC01545Q5VT33 79 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 HYLS1Q96M11 299 aa2.86□□□□□ -1.95
AP3S1-202ENST00000395548 H3BRN7 92 aa2.85□□□□□ -1.95
AP3S1-202ENST00000395548 HINT1P49773 126 aaPredicted RBP2.85□□□□□ -1.95
AP3S1-202ENST00000395548 CFAP126Q5VTH2 177 aa2.85□□□□□ -1.95
AP3S1-202ENST00000395548 Q6ZUT4 128 aa2.85□□□□□ -1.95
AP3S1-202ENST00000395548 SNX29P2Q8IUI4 249 aa2.85□□□□□ -1.95
AP3S1-202ENST00000395548 RAB37Q96AX2 223 aa2.85□□□□□ -1.95
AP3S1-202ENST00000395548 NAA60Q9H7X0 242 aa2.85□□□□□ -1.95
AP3S1-202ENST00000395548 CEBPZOSA8MTT3 80 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 CCL25O15444 150 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 BAALC-AS2P0C853 105 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 ROMO1P60602 79 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 ZNF345Q14585 488 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 PYDC2Q56P42 97 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 NMSQ5H8A3 153 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 DEFB107AQ8IZN7 70 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 LINC00269Q8N2A0 174 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 OR2T35Q8NGX2 323 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 NDUFB11Q9NX14 153 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 CACFD1Q9UGQ2 172 aa2.84□□□□□ -1.95
AP3S1-202ENST00000395548 IGKV2D-26A0A0A0MRZ7 120 aa2.83□□□□□ -1.96
AP3S1-202ENST00000395548 A0A1W2PNN7 141 aa2.83□□□□□ -1.96
AP3S1-202ENST00000395548 G3V3Q6 166 aa2.83□□□□□ -1.96
AP3S1-202ENST00000395548 HSD52Q0P140 79 aa2.83□□□□□ -1.96
AP3S1-202ENST00000395548 PCOTHQ58A44 107 aa2.83□□□□□ -1.96
AP3S1-202ENST00000395548 C9orf116Q5BN46 136 aaPredicted RBP2.83□□□□□ -1.96
AP3S1-202ENST00000395548 CLPSL2Q6UWE3 100 aa2.83□□□□□ -1.96
AP3S1-202ENST00000395548 UBE2D4Q9Y2X8 147 aa2.83□□□□□ -1.96
AP3S1-202ENST00000395548 HYPMO75409 117 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 HRES1P13985 223 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 MRPL54Q6P161 138 aaKnown RBP2.82□□□□□ -1.96
AP3S1-202ENST00000395548 SPAG11AQ6PDA7 123 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 CMTM2Q8TAZ6 248 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 C20orf166-AS1Q96NR2 134 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 SEC11CQ9BY50 192 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 ATG5Q9H1Y0 275 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 NDUFA12Q9UI09 145 aa2.82□□□□□ -1.96
AP3S1-202ENST00000395548 TMSB15BA0A087X1C1 80 aa2.81□□□□□ -1.96
AP3S1-202ENST00000395548 TRBV6-8A0A0A6YYG3 113 aa2.81□□□□□ -1.96
AP3S1-202ENST00000395548 IGHV1-24A0A0C4DH33 117 aa2.81□□□□□ -1.96
AP3S1-202ENST00000395548 TMEM254Q8TBM7 123 aa2.81□□□□□ -1.96
AP3S1-202ENST00000395548 AGPAT4-IT1Q9H0P7 198 aa2.81□□□□□ -1.96
AP3S1-202ENST00000395548 GVQW2A0A096LPI5 108 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms