RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
HLA-DMA-202ENST00000395303 SMCR5Q8TEV8 140 aa7.84□□□□□ -1.15
HLA-DMA-202ENST00000395303 SPRR4Q96PI1 79 aa7.84□□□□□ -1.15
HLA-DMA-202ENST00000395303 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
HLA-DMA-202ENST00000395303 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
HLA-DMA-202ENST00000395303 PCP2Q8IVA1 136 aa7.83□□□□□ -1.16
HLA-DMA-202ENST00000395303 LPAP08519 4548 aa7.82□□□□□ -1.16
HLA-DMA-202ENST00000395303 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
HLA-DMA-202ENST00000395303 Q6ZRX8 168 aa7.82□□□□□ -1.16
HLA-DMA-202ENST00000395303 Q6ZVH6 145 aa7.82□□□□□ -1.16
HLA-DMA-202ENST00000395303 CBY1Q9Y3M2 126 aa7.82□□□□□ -1.16
HLA-DMA-202ENST00000395303 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
HLA-DMA-202ENST00000395303 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
HLA-DMA-202ENST00000395303 IFITM1P13164 125 aa7.81□□□□□ -1.16
HLA-DMA-202ENST00000395303 LINC00518Q8N0U6 118 aa7.8□□□□□ -1.16
HLA-DMA-202ENST00000395303 Q9BRP9 147 aa7.8□□□□□ -1.16
HLA-DMA-202ENST00000395303 ZNF73O43830 326 aaPredicted RBP7.79□□□□□ -1.16
HLA-DMA-202ENST00000395303 CTAG1AP78358 180 aa7.79□□□□□ -1.16
HLA-DMA-202ENST00000395303 LINC00483Q53H64 154 aa7.79□□□□□ -1.16
HLA-DMA-202ENST00000395303 COPS9Q8WXC6 57 aa7.79□□□□□ -1.16
HLA-DMA-202ENST00000395303 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
HLA-DMA-202ENST00000395303 C3orf22Q8N5N4 141 aa7.78□□□□□ -1.16
HLA-DMA-202ENST00000395303 HSBP1L1C9JCN9 74 aa7.77□□□□□ -1.17
HLA-DMA-202ENST00000395303 JOSD1Q15040 202 aaPredicted RBP7.77□□□□□ -1.17
HLA-DMA-202ENST00000395303 LINC00304Q8N9R0 145 aa7.76□□□□□ -1.17
HLA-DMA-202ENST00000395303 OR13C6PQ8NH95 151 aa7.76□□□□□ -1.17
HLA-DMA-202ENST00000395303 MUSTN1Q8IVN3 82 aa7.75□□□□□ -1.17
HLA-DMA-202ENST00000395303 TSPAN13O95857 204 aa7.74□□□□□ -1.17
HLA-DMA-202ENST00000395303 HINT1P49773 126 aaPredicted RBP7.74□□□□□ -1.17
HLA-DMA-202ENST00000395303 SCGB1D1O95968 90 aa7.73□□□□□ -1.17
HLA-DMA-202ENST00000395303 ELOF1P60002 83 aaKnown RBP7.72□□□□□ -1.17
HLA-DMA-202ENST00000395303 GAGE2AQ6NT46 116 aa7.72□□□□□ -1.17
HLA-DMA-202ENST00000395303 TRBV7-6A0A0J9YX20 115 aa7.71□□□□□ -1.18
HLA-DMA-202ENST00000395303 SPAG11AQ6PDA7 123 aa7.71□□□□□ -1.18
HLA-DMA-202ENST00000395303 COX8AP10176 69 aa7.7□□□□□ -1.18
HLA-DMA-202ENST00000395303 C6orf99Q4VX62 202 aa7.7□□□□□ -1.18
HLA-DMA-202ENST00000395303 DHRS4-AS1Q9P1J3 65 aa7.7□□□□□ -1.18
HLA-DMA-202ENST00000395303 DLEU1O43261 78 aa7.69□□□□□ -1.18
HLA-DMA-202ENST00000395303 SPRR1BP22528 89 aa7.69□□□□□ -1.18
HLA-DMA-202ENST00000395303 PRR4Q16378 134 aa7.69□□□□□ -1.18
HLA-DMA-202ENST00000395303 TRAV13-2A0A0B4J235 113 aa7.68□□□□□ -1.18
HLA-DMA-202ENST00000395303 COX7BP24311 80 aa7.68□□□□□ -1.18
HLA-DMA-202ENST00000395303 SSBP3-AS1Q7Z2R9 100 aa7.68□□□□□ -1.18
HLA-DMA-202ENST00000395303 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
HLA-DMA-202ENST00000395303 A6NDN8 102 aa7.67□□□□□ -1.18
HLA-DMA-202ENST00000395303 ST20-AS1Q8NBB2 130 aa7.67□□□□□ -1.18
HLA-DMA-202ENST00000395303 Q8NBF4 154 aa7.67□□□□□ -1.18
HLA-DMA-202ENST00000395303 A4D1N5 150 aa7.65□□□□□ -1.18
HLA-DMA-202ENST00000395303 MUC2Q02817 5179 aa7.64□□□□□ -1.19
HLA-DMA-202ENST00000395303 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
HLA-DMA-202ENST00000395303 SPINK1P00995 79 aa7.64□□□□□ -1.19
HLA-DMA-202ENST00000395303 RPS29P62273 56 aaKnown RBP7.64□□□□□ -1.19
HLA-DMA-202ENST00000395303 MOBPQ13875 183 aa7.64□□□□□ -1.19
HLA-DMA-202ENST00000395303 SMIM11BQ8TCY0 68 aa7.64□□□□□ -1.19
HLA-DMA-202ENST00000395303 HIGD1BQ9P298 99 aa7.64□□□□□ -1.19
HLA-DMA-202ENST00000395303 SPATA45Q537H7 98 aa7.63□□□□□ -1.19
HLA-DMA-202ENST00000395303 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
HLA-DMA-202ENST00000395303 SLC25A34Q6PIV7 304 aa7.62□□□□□ -1.19
HLA-DMA-202ENST00000395303 HIST1H4GQ99525 98 aa7.62□□□□□ -1.19
HLA-DMA-202ENST00000395303 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
HLA-DMA-202ENST00000395303 VAMP8Q9BV40 100 aa7.62□□□□□ -1.19
HLA-DMA-202ENST00000395303 PAM16Q9Y3D7 125 aa7.62□□□□□ -1.19
HLA-DMA-202ENST00000395303 C14orf144Q96I85 54 aa7.61□□□□□ -1.19
HLA-DMA-202ENST00000395303 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
HLA-DMA-202ENST00000395303 LINC01547P58512 204 aaPredicted RBP7.6□□□□□ -1.19
HLA-DMA-202ENST00000395303 TEX49A0A1B0GTD5 131 aa7.59□□□□□ -1.19
HLA-DMA-202ENST00000395303 C9orf153Q5TBE3 101 aa7.59□□□□□ -1.19
HLA-DMA-202ENST00000395303 C2orf91Q6ZV80 131 aa7.59□□□□□ -1.19
HLA-DMA-202ENST00000395303 NHP2Q9NX24 153 aaKnown RBP7.59□□□□□ -1.19
HLA-DMA-202ENST00000395303 LAMTOR3Q9UHA4 124 aa7.59□□□□□ -1.19
HLA-DMA-202ENST00000395303 TAL2Q16559 108 aa7.58□□□□□ -1.2
HLA-DMA-202ENST00000395303 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
HLA-DMA-202ENST00000395303 PYY3Q5JQD4 70 aa7.58□□□□□ -1.2
HLA-DMA-202ENST00000395303 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
HLA-DMA-202ENST00000395303 IGLV7-46A0A075B6I9 117 aa7.57□□□□□ -1.2
HLA-DMA-202ENST00000395303 VAMP3Q15836 100 aa7.57□□□□□ -1.2
HLA-DMA-202ENST00000395303 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
HLA-DMA-202ENST00000395303 SMIM29Q86T20 159 aa7.56□□□□□ -1.2
HLA-DMA-202ENST00000395303 Q8N377 158 aa7.56□□□□□ -1.2
HLA-DMA-202ENST00000395303 CFC1BP0CG36 223 aa7.55□□□□□ -1.2
HLA-DMA-202ENST00000395303 CFC1P0CG37 223 aa7.55□□□□□ -1.2
HLA-DMA-202ENST00000395303 C12orf57Q99622 126 aa7.55□□□□□ -1.2
HLA-DMA-202ENST00000395303 A0A0B4J2C4 111 aa7.54□□□□□ -1.2
HLA-DMA-202ENST00000395303 SLC25A20O43772 301 aa7.54□□□□□ -1.2
HLA-DMA-202ENST00000395303 DEFB105AQ8NG35 78 aa7.54□□□□□ -1.2
HLA-DMA-202ENST00000395303 Q1RN00 199 aa7.53□□□□□ -1.2
HLA-DMA-202ENST00000395303 CEND1Q8N111 149 aa7.53□□□□□ -1.2
HLA-DMA-202ENST00000395303 TMA7Q9Y2S6 64 aaKnown RBP7.53□□□□□ -1.2
HLA-DMA-202ENST00000395303 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
HLA-DMA-202ENST00000395303 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
HLA-DMA-202ENST00000395303 CD164Q04900 197 aa7.52□□□□□ -1.21
HLA-DMA-202ENST00000395303 BVES-AS1Q5T3Y7 98 aa7.52□□□□□ -1.21
HLA-DMA-202ENST00000395303 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
HLA-DMA-202ENST00000395303 PRO1933Q9H354 126 aa7.51□□□□□ -1.21
HLA-DMA-202ENST00000395303 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
HLA-DMA-202ENST00000395303 Q6ZQY7 126 aa7.49□□□□□ -1.21
HLA-DMA-202ENST00000395303 RAB37Q96AX2 223 aa7.49□□□□□ -1.21
HLA-DMA-202ENST00000395303 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
HLA-DMA-202ENST00000395303 A6NJY4 79 aa7.48□□□□□ -1.21
HLA-DMA-202ENST00000395303 FXYD2P54710 66 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms