RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 OBSCN-AS1Q96MR7 158 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 NOP10Q9NPE3 64 aaKnown RBP2.67□□□□□ -1.98
HERC4-204ENST00000395198 K7EIM0 57 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 CTSGP08311 255 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 C10orf99Q6UWK7 81 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 TRBV6-5A0A0K0K1A5 114 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 ODF3BA8MYP8 253 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 LCE2BO14633 110 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 NDUFA3O95167 84 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 Q8N377 158 aa2.67□□□□□ -1.98
HERC4-204ENST00000395198 H3BRN7 92 aa2.66□□□□□ -1.98
HERC4-204ENST00000395198 C14orf132Q9NPU4 83 aa2.66□□□□□ -1.98
HERC4-204ENST00000395198 CHD6Q8TD26 2715 aa2.66□□□□□ -1.98
HERC4-204ENST00000395198 H3BPC8 53 aa2.66□□□□□ -1.98
HERC4-204ENST00000395198 SPINK7P58062 85 aa2.66□□□□□ -1.98
HERC4-204ENST00000395198 LINC01546A6NGU7 62 aa2.65□□□□□ -1.98
HERC4-204ENST00000395198 I3L2K1 104 aa2.65□□□□□ -1.98
HERC4-204ENST00000395198 IGLV10-54A0A075B6I4 117 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 ANGP03950 147 aaKnown RBP2.65□□□□□ -1.99
HERC4-204ENST00000395198 Q86TA4 180 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 IGKV2D-24A0A075B6R9 120 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 CHD9Q3L8U1 2897 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 H3BQ85 93 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 PROP1O75360 226 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 DEFB1P60022 68 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 NREPQ16612 68 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
HERC4-204ENST00000395198 KRTAP15-1Q3LI76 137 aa2.64□□□□□ -1.99
HERC4-204ENST00000395198 CLPSL2Q6UWE3 100 aa2.64□□□□□ -1.99
HERC4-204ENST00000395198 COL6A5A8TX70 2615 aa2.64□□□□□ -1.99
HERC4-204ENST00000395198 IGHV3-64A0A075B6Q5 118 aa2.64□□□□□ -1.99
HERC4-204ENST00000395198 DNAL4O96015 105 aa2.64□□□□□ -1.99
HERC4-204ENST00000395198 KRTAP17-1Q9BYP8 105 aa2.64□□□□□ -1.99
HERC4-204ENST00000395198 TMEM14CQ9P0S9 112 aa2.64□□□□□ -1.99
HERC4-204ENST00000395198 DSPP15924 2871 aaKnown RBP2.63□□□□□ -1.99
HERC4-204ENST00000395198 LINC00158P58513 81 aa2.63□□□□□ -1.99
HERC4-204ENST00000395198 DEFB114Q30KQ6 69 aa2.63□□□□□ -1.99
HERC4-204ENST00000395198 C9orf129Q5T035 196 aaKnown RBP2.63□□□□□ -1.99
HERC4-204ENST00000395198 KLK12Q9UKR0 248 aa2.63□□□□□ -1.99
HERC4-204ENST00000395198 IGIPA6NJ69 53 aa2.63□□□□□ -1.99
HERC4-204ENST00000395198 C9orf47Q6ZRZ4 202 aa2.63□□□□□ -1.99
HERC4-204ENST00000395198 C16orf74Q96GX8 76 aa2.63□□□□□ -1.99
HERC4-204ENST00000395198 MRPL36Q9P0J6 103 aaKnown RBP2.63□□□□□ -1.99
HERC4-204ENST00000395198 NOTCH1P46531 2555 aa2.63□□□□□ -1.99
HERC4-204ENST00000395198 LCE6AA0A183 80 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 MGAQ8IWI9 3026 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 I3L3M4 83 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 CNBPP62633 177 aaKnown RBP2.62□□□□□ -1.99
HERC4-204ENST00000395198 HIGD2AQ9BW72 106 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 LENEPQ9Y5L5 61 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 FRYQ5TBA9 3013 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 DEFB131BA0A096LNP1 70 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 PLNP26678 52 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 ZCCHC13Q8WW36 166 aaKnown RBP2.62□□□□□ -1.99
HERC4-204ENST00000395198 ORMDL1Q9P0S3 153 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 A0A0J9YX75 114 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 Q9BRP9 147 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 WFDC10AQ9H1F0 79 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 TEX15Q9BXT5 2789 aa2.62□□□□□ -1.99
HERC4-204ENST00000395198 LY6G6CO95867 125 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 KPRPQ5T749 579 aaPredicted RBP2.61□□□□□ -1.99
HERC4-204ENST00000395198 SPANXA2-OT1Q8N9U9 137 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 DNAH3Q8TD57 4116 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 SPAG11BQ08648 103 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 SPAG11AQ6PDA7 123 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 ZNF625Q96I27 306 aaPredicted RBP2.61□□□□□ -1.99
HERC4-204ENST00000395198 AMELXQ99217 191 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 LINC01558Q9Y6Z2 57 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
HERC4-204ENST00000395198 GCN1Q92616 2671 aaKnown RBP2.61□□□□□ -1.99
HERC4-204ENST00000395198 PRO0255Q9UI72 69 aa2.6□□□□□ -1.99
HERC4-204ENST00000395198 KRTAP24-1Q3LI83 254 aa2.6□□□□□ -1.99
HERC4-204ENST00000395198 AKAP13Q12802 2813 aa2.6□□□□□ -1.99
HERC4-204ENST00000395198 UNC79Q9P2D8 2635 aa2.6□□□□□ -1.99
HERC4-204ENST00000395198 MAP1AP78559 2803 aaPredicted RBP2.6□□□□□ -1.99
HERC4-204ENST00000395198 TRBV10-1A0A0K0K1A3 114 aa2.6□□□□□ -1.99
HERC4-204ENST00000395198 M0R2N4 97 aa2.6□□□□□ -1.99
HERC4-204ENST00000395198 ELOF1P60002 83 aaKnown RBP2.59□□□□□ -1.99
HERC4-204ENST00000395198 Q6ZTI0 123 aa2.59□□□□□ -1.99
HERC4-204ENST00000395198 Q8N3U1 123 aa2.59□□□□□ -2
HERC4-204ENST00000395198 DMXL1Q9Y485 3027 aa2.59□□□□□ -2
HERC4-204ENST00000395198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.58□□□□□ -2
HERC4-204ENST00000395198 IGKV2-29A2NJV5 120 aaPredicted RBP2.58□□□□□ -2
HERC4-204ENST00000395198 C1orf137Q5JT78 98 aa2.58□□□□□ -2
HERC4-204ENST00000395198 IGSF10Q6WRI0 2623 aa2.58□□□□□ -2
HERC4-204ENST00000395198 LINC00959A0A1B0GUT2 108 aa2.58□□□□□ -2
HERC4-204ENST00000395198 KRTAP3-1Q9BYR8 98 aa2.58□□□□□ -2
HERC4-204ENST00000395198 GFRA4Q9GZZ7 299 aa2.58□□□□□ -2
HERC4-204ENST00000395198 LYSTQ99698 3801 aa2.58□□□□□ -2
HERC4-204ENST00000395198 TRAV12-1A0A0B4J245 112 aa2.58□□□□□ -2
HERC4-204ENST00000395198 A0A1B0GU33 70 aa2.58□□□□□ -2
HERC4-204ENST00000395198 SMIM2Q9BVW6 85 aa2.58□□□□□ -2
HERC4-204ENST00000395198 Q5W150 140 aa2.58□□□□□ -2
HERC4-204ENST00000395198 A0A0J9YWU9 116 aa2.57□□□□□ -2
HERC4-204ENST00000395198 NUPR2A6NF83 97 aa2.57□□□□□ -2
HERC4-204ENST00000395198 LITAFQ99732 161 aa2.57□□□□□ -2
HERC4-204ENST00000395198 ZNF861PO60384 105 aa2.57□□□□□ -2
HERC4-204ENST00000395198 A0A087WTM6 91 aa2.57□□□□□ -2
HERC4-204ENST00000395198 F8VRH5 84 aa2.57□□□□□ -2
HERC4-204ENST00000395198 IGLV7-46A0A075B6I9 117 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms