RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 TNP2Q05952 138 aa12.7□□□□□ -0.38
CXXC4-201ENST00000394767 LITAFQ99732 161 aa12.69□□□□□ -0.38
CXXC4-201ENST00000394767 MXRA5Q9NR99 2828 aa12.68□□□□□ -0.38
CXXC4-201ENST00000394767 Q6JHZ5 121 aa12.67□□□□□ -0.38
CXXC4-201ENST00000394767 LINC00643Q86TS7 51 aa12.66□□□□□ -0.38
CXXC4-201ENST00000394767 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
CXXC4-201ENST00000394767 Q6ZRX8 168 aa12.64□□□□□ -0.39
CXXC4-201ENST00000394767 PDZD2O15018 2839 aa12.63□□□□□ -0.39
CXXC4-201ENST00000394767 BCE1O60756 84 aa12.63□□□□□ -0.39
CXXC4-201ENST00000394767 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
CXXC4-201ENST00000394767 RPL37AP61513 92 aaKnown RBP12.62□□□□□ -0.39
CXXC4-201ENST00000394767 ELOF1P60002 83 aaKnown RBP12.62□□□□□ -0.39
CXXC4-201ENST00000394767 CNBPP62633 177 aaKnown RBP12.62□□□□□ -0.39
CXXC4-201ENST00000394767 C9orf129Q5T035 196 aaKnown RBP12.62□□□□□ -0.39
CXXC4-201ENST00000394767 PLA2G1BP04054 148 aaKnown RBP12.61□□□□□ -0.39
CXXC4-201ENST00000394767 EIF4EBP3O60516 100 aaPredicted RBP12.6□□□□□ -0.39
CXXC4-201ENST00000394767 SDIM1Q6ZPB5 146 aa12.6□□□□□ -0.39
CXXC4-201ENST00000394767 TLX1NBP0CAT3 122 aa12.59□□□□□ -0.39
CXXC4-201ENST00000394767 A0A087WSZ3 146 aa12.59□□□□□ -0.39
CXXC4-201ENST00000394767 TRBV7-6A0A0J9YX20 115 aa12.59□□□□□ -0.39
CXXC4-201ENST00000394767 MOBPQ13875 183 aa12.59□□□□□ -0.39
CXXC4-201ENST00000394767 IGLV6-57P01721 117 aa12.57□□□□□ -0.4
CXXC4-201ENST00000394767 MP68P56378 58 aa12.57□□□□□ -0.4
CXXC4-201ENST00000394767 IGLV1-50A0A075B6I6 118 aa12.57□□□□□ -0.4
CXXC4-201ENST00000394767 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
CXXC4-201ENST00000394767 FAM236AA0A1B0GUQ0 79 aa12.56□□□□□ -0.4
CXXC4-201ENST00000394767 FAM236BA0A1B0GV22 79 aa12.56□□□□□ -0.4
CXXC4-201ENST00000394767 CRYGAP11844 174 aa12.56□□□□□ -0.4
CXXC4-201ENST00000394767 FAM218AQ96MZ4 157 aa12.55□□□□□ -0.4
CXXC4-201ENST00000394767 ST20-AS1Q8NBB2 130 aa12.55□□□□□ -0.4
CXXC4-201ENST00000394767 A0A1W2PNN7 141 aa12.55□□□□□ -0.4
CXXC4-201ENST00000394767 FAM104AQ969W3 186 aa12.54□□□□□ -0.4
CXXC4-201ENST00000394767 STAB2Q8WWQ8 2551 aa12.53□□□□□ -0.4
CXXC4-201ENST00000394767 WFDC13Q8IUB5 93 aa12.52□□□□□ -0.4
CXXC4-201ENST00000394767 KCNQ1DNQ9H478 68 aa12.52□□□□□ -0.41
CXXC4-201ENST00000394767 ATP5EP2Q5VTU8 51 aa12.52□□□□□ -0.41
CXXC4-201ENST00000394767 NBPF19A0A087WUL8 3843 aa12.52□□□□□ -0.41
CXXC4-201ENST00000394767 IGKV4-1P06312 121 aa12.51□□□□□ -0.41
CXXC4-201ENST00000394767 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
CXXC4-201ENST00000394767 OTOGQ6ZRI0 2925 aa12.49□□□□□ -0.41
CXXC4-201ENST00000394767 TYMSOSQ8TAI1 123 aa12.49□□□□□ -0.41
CXXC4-201ENST00000394767 LIMD2Q9BT23 127 aa12.48□□□□□ -0.41
CXXC4-201ENST00000394767 ATOX1O00244 68 aa12.48□□□□□ -0.41
CXXC4-201ENST00000394767 LCE6AA0A183 80 aa12.47□□□□□ -0.41
CXXC4-201ENST00000394767 DEFB116Q30KQ4 102 aa12.46□□□□□ -0.41
CXXC4-201ENST00000394767 SPACA4Q8TDM5 124 aa12.46□□□□□ -0.41
CXXC4-201ENST00000394767 PLA2G2DQ9UNK4 145 aa12.46□□□□□ -0.42
CXXC4-201ENST00000394767 ZNF861PO60384 105 aa12.44□□□□□ -0.42
CXXC4-201ENST00000394767 PSORS1C2Q9UIG4 136 aa12.43□□□□□ -0.42
CXXC4-201ENST00000394767 IGHV6-1A0A0B4J1U7 121 aa12.43□□□□□ -0.42
CXXC4-201ENST00000394767 MT-ATP8P03928 68 aa12.43□□□□□ -0.42
CXXC4-201ENST00000394767 B5MCH6 92 aa12.41□□□□□ -0.42
CXXC4-201ENST00000394767 Q8NBF4 154 aa12.41□□□□□ -0.42
CXXC4-201ENST00000394767 LINC00528Q8N1L1 170 aa12.4□□□□□ -0.42
CXXC4-201ENST00000394767 J3QL48 77 aa12.4□□□□□ -0.43
CXXC4-201ENST00000394767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.4□□□□□ -0.43
CXXC4-201ENST00000394767 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
CXXC4-201ENST00000394767 IGLV7-43P04211 117 aa12.36□□□□□ -0.43
CXXC4-201ENST00000394767 FAM240AA0A1B0GVK7 77 aa12.35□□□□□ -0.43
CXXC4-201ENST00000394767 J3KT08 172 aa12.33□□□□□ -0.44
CXXC4-201ENST00000394767 ZFHX3Q15911 3703 aa12.33□□□□□ -0.44
CXXC4-201ENST00000394767 Q6ZVQ6 151 aa12.32□□□□□ -0.44
CXXC4-201ENST00000394767 LINC00846Q9NV44 126 aa12.32□□□□□ -0.44
CXXC4-201ENST00000394767 ANAPC11Q9NYG5 84 aa12.31□□□□□ -0.44
CXXC4-201ENST00000394767 SMCPP49901 116 aaPredicted RBP12.28□□□□□ -0.44
CXXC4-201ENST00000394767 SPENQ96T58 3664 aaKnown RBP12.28□□□□□ -0.44
CXXC4-201ENST00000394767 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
CXXC4-201ENST00000394767 IGLV5-37A0A075B6J1 123 aa12.28□□□□□ -0.44
CXXC4-201ENST00000394767 TENM1Q9UKZ4 2725 aa12.27□□□□□ -0.45
CXXC4-201ENST00000394767 CHKB-CPT1BH3BT56 60 aa12.26□□□□□ -0.45
CXXC4-201ENST00000394767 LINC01547P58512 204 aaPredicted RBP12.26□□□□□ -0.45
CXXC4-201ENST00000394767 CELSR1Q9NYQ6 3014 aa12.25□□□□□ -0.45
CXXC4-201ENST00000394767 BSNQ9UPA5 3926 aa12.25□□□□□ -0.45
CXXC4-201ENST00000394767 Q6ZR54 194 aa12.25□□□□□ -0.45
CXXC4-201ENST00000394767 FAM30AQ9NZY2 134 aa12.25□□□□□ -0.45
CXXC4-201ENST00000394767 ERC2-IT1O76042 136 aa12.24□□□□□ -0.45
CXXC4-201ENST00000394767 CASC2Q6XLA1 102 aa12.24□□□□□ -0.45
CXXC4-201ENST00000394767 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
CXXC4-201ENST00000394767 IMUPQ9GZP8 106 aa12.23□□□□□ -0.45
CXXC4-201ENST00000394767 C20orf197Q8N268 126 aa12.23□□□□□ -0.45
CXXC4-201ENST00000394767 Q8N377 158 aa12.22□□□□□ -0.45
CXXC4-201ENST00000394767 Q6ZQT0 140 aa12.22□□□□□ -0.45
CXXC4-201ENST00000394767 A0A087WVE0 104 aa12.21□□□□□ -0.45
CXXC4-201ENST00000394767 KRTAP10-2P60368 255 aa12.21□□□□□ -0.45
CXXC4-201ENST00000394767 RETNLBQ9BQ08 111 aa12.21□□□□□ -0.45
CXXC4-201ENST00000394767 PRO0461Q9UI25 63 aa12.21□□□□□ -0.45
CXXC4-201ENST00000394767 Q8N9L7 120 aa12.2□□□□□ -0.46
CXXC4-201ENST00000394767 SSBP3-AS1Q7Z2R9 100 aa12.19□□□□□ -0.46
CXXC4-201ENST00000394767 LINC00304Q8N9R0 145 aa12.19□□□□□ -0.46
CXXC4-201ENST00000394767 SPRR4Q96PI1 79 aa12.19□□□□□ -0.46
CXXC4-201ENST00000394767 PLAC8Q9NZF1 115 aa12.18□□□□□ -0.46
CXXC4-201ENST00000394767 PRR4Q16378 134 aa12.18□□□□□ -0.46
CXXC4-201ENST00000394767 LOC110117498A0A087WWA1 95 aa12.17□□□□□ -0.46
CXXC4-201ENST00000394767 A0A1B0GW54 56 aa12.16□□□□□ -0.46
CXXC4-201ENST00000394767 A0A0G2JQZ4 141 aa12.15□□□□□ -0.46
CXXC4-201ENST00000394767 IGFL1Q6UW32 110 aa12.15□□□□□ -0.47
CXXC4-201ENST00000394767 KRTAP10-1P60331 282 aa12.14□□□□□ -0.47
CXXC4-201ENST00000394767 TRBV7-4A0A0J9YYF1 115 aa12.14□□□□□ -0.47
CXXC4-201ENST00000394767 CSMD2Q7Z408 3487 aa12.12□□□□□ -0.47
CXXC4-201ENST00000394767 HCG22E2RYF7 251 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms