RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 GVQW2A0A096LPI5 108 aaPredicted RBP6.48□□□□□ -1.37
COL6A3-204ENST00000392003 PSPHP1O15172 72 aa6.47□□□□□ -1.37
COL6A3-204ENST00000392003 HIGD2BQ4VC39 106 aa6.47□□□□□ -1.37
COL6A3-204ENST00000392003 PKD1L1Q8TDX9 2849 aa6.47□□□□□ -1.37
COL6A3-204ENST00000392003 OBSCN-AS1Q96MR7 158 aa6.46□□□□□ -1.38
COL6A3-204ENST00000392003 LINC00167Q96N53 147 aa6.46□□□□□ -1.38
COL6A3-204ENST00000392003 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
COL6A3-204ENST00000392003 LINC00575Q6W349 94 aa6.45□□□□□ -1.38
COL6A3-204ENST00000392003 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
COL6A3-204ENST00000392003 ESRGQ1W209 222 aa6.45□□□□□ -1.38
COL6A3-204ENST00000392003 NBEAL1Q6ZS30 2694 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 IGKV2D-24A0A075B6R9 120 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 KLKP1Q107X0 134 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 TRAV10A0A0B4J240 114 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 Q8NDZ9 215 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 M0R378 163 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 KTN1-AS1Q86SY8 53 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 LAMTOR3Q9UHA4 124 aa6.44□□□□□ -1.38
COL6A3-204ENST00000392003 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
COL6A3-204ENST00000392003 H3BQ85 93 aa6.43□□□□□ -1.38
COL6A3-204ENST00000392003 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
COL6A3-204ENST00000392003 LINC01556Q5JQF7 62 aa6.42□□□□□ -1.38
COL6A3-204ENST00000392003 K7EIL1 84 aa6.41□□□□□ -1.38
COL6A3-204ENST00000392003 COX7BP24311 80 aa6.41□□□□□ -1.38
COL6A3-204ENST00000392003 TENM3Q9P273 2699 aa6.4□□□□□ -1.39
COL6A3-204ENST00000392003 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.39
COL6A3-204ENST00000392003 Q6ZQY7 126 aa6.4□□□□□ -1.39
COL6A3-204ENST00000392003 Q6ZRP5 223 aa6.4□□□□□ -1.39
COL6A3-204ENST00000392003 LINC00588Q9Y4M8 146 aa6.4□□□□□ -1.39
COL6A3-204ENST00000392003 TRAV7A0A075B6U4 112 aa6.39□□□□□ -1.39
COL6A3-204ENST00000392003 SYCNQ0VAF6 134 aa6.39□□□□□ -1.39
COL6A3-204ENST00000392003 C15orf56Q8N910 161 aa6.39□□□□□ -1.39
COL6A3-204ENST00000392003 MDFIQ99750 246 aa6.39□□□□□ -1.39
COL6A3-204ENST00000392003 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
COL6A3-204ENST00000392003 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
COL6A3-204ENST00000392003 VPREB1P12018 145 aa6.38□□□□□ -1.39
COL6A3-204ENST00000392003 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
COL6A3-204ENST00000392003 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
COL6A3-204ENST00000392003 PDE6GP18545 87 aa6.37□□□□□ -1.39
COL6A3-204ENST00000392003 ATP5EP2Q5VTU8 51 aa6.37□□□□□ -1.39
COL6A3-204ENST00000392003 NKAPP1Q8N9T2 125 aa6.37□□□□□ -1.39
COL6A3-204ENST00000392003 DNAH10OSP0CZ25 163 aa6.36□□□□□ -1.39
COL6A3-204ENST00000392003 HAMPP81172 84 aa6.36□□□□□ -1.39
COL6A3-204ENST00000392003 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
COL6A3-204ENST00000392003 ELOF1P60002 83 aaKnown RBP6.35□□□□□ -1.39
COL6A3-204ENST00000392003 LOC110117498A0A087WWA1 95 aa6.34□□□□□ -1.39
COL6A3-204ENST00000392003 Q6ZQT0 140 aa6.34□□□□□ -1.39
COL6A3-204ENST00000392003 A8MUN3 132 aa6.33□□□□□ -1.4
COL6A3-204ENST00000392003 TRAV22A0A0B4J277 110 aa6.32□□□□□ -1.4
COL6A3-204ENST00000392003 STAB2Q8WWQ8 2551 aa6.32□□□□□ -1.4
COL6A3-204ENST00000392003 TRBV7-4A0A0J9YYF1 115 aa6.31□□□□□ -1.4
COL6A3-204ENST00000392003 NDUFC1O43677 76 aa6.31□□□□□ -1.4
COL6A3-204ENST00000392003 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
COL6A3-204ENST00000392003 ATP5EP56381 51 aaPredicted RBP6.31□□□□□ -1.4
COL6A3-204ENST00000392003 C16orf90A8MZG2 172 aa6.3□□□□□ -1.4
COL6A3-204ENST00000392003 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
COL6A3-204ENST00000392003 Q6ZVQ6 151 aa6.3□□□□□ -1.4
COL6A3-204ENST00000392003 PSCAO43653 123 aa6.29□□□□□ -1.4
COL6A3-204ENST00000392003 TMEM254Q8TBM7 123 aa6.29□□□□□ -1.4
COL6A3-204ENST00000392003 TLX1NBP0CAT3 122 aa6.29□□□□□ -1.4
COL6A3-204ENST00000392003 C7orf33Q8WU49 177 aa6.29□□□□□ -1.4
COL6A3-204ENST00000392003 Q1T7F1 81 aa6.27□□□□□ -1.41
COL6A3-204ENST00000392003 SCXQ7RTU7 201 aa6.27□□□□□ -1.41
COL6A3-204ENST00000392003 KCNQ1DNQ9H478 68 aa6.27□□□□□ -1.41
COL6A3-204ENST00000392003 ETDCA0A1B0GVM5 59 aa6.27□□□□□ -1.41
COL6A3-204ENST00000392003 SERTAD4-AS1Q5TG53 156 aa6.27□□□□□ -1.41
COL6A3-204ENST00000392003 PLA2G2DQ9UNK4 145 aa6.27□□□□□ -1.41
COL6A3-204ENST00000392003 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
COL6A3-204ENST00000392003 M0R2N4 97 aa6.26□□□□□ -1.41
COL6A3-204ENST00000392003 DEFB105AQ8NG35 78 aa6.26□□□□□ -1.41
COL6A3-204ENST00000392003 B9D2Q9BPU9 175 aa6.26□□□□□ -1.41
COL6A3-204ENST00000392003 DHRS4-AS1Q9P1J3 65 aa6.26□□□□□ -1.41
COL6A3-204ENST00000392003 PRYO14603 147 aa6.25□□□□□ -1.41
COL6A3-204ENST00000392003 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
COL6A3-204ENST00000392003 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
COL6A3-204ENST00000392003 A6NN06 94 aa6.25□□□□□ -1.41
COL6A3-204ENST00000392003 BCE1O60756 84 aa6.25□□□□□ -1.41
COL6A3-204ENST00000392003 PRR4Q16378 134 aa6.25□□□□□ -1.41
COL6A3-204ENST00000392003 CASC10Q5T4H9 136 aa6.25□□□□□ -1.41
COL6A3-204ENST00000392003 UBE2BP63146 152 aa6.24□□□□□ -1.41
COL6A3-204ENST00000392003 C1orf64Q8NEQ6 169 aa6.24□□□□□ -1.41
COL6A3-204ENST00000392003 HIGD2AQ9BW72 106 aa6.24□□□□□ -1.41
COL6A3-204ENST00000392003 NREPQ16612 68 aa6.24□□□□□ -1.41
COL6A3-204ENST00000392003 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
COL6A3-204ENST00000392003 CXCL6P80162 114 aa6.23□□□□□ -1.41
COL6A3-204ENST00000392003 Q5VV11 94 aa6.23□□□□□ -1.41
COL6A3-204ENST00000392003 IGLV5-37A0A075B6J1 123 aa6.23□□□□□ -1.41
COL6A3-204ENST00000392003 LCA10Q71F78 164 aa6.22□□□□□ -1.41
COL6A3-204ENST00000392003 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
COL6A3-204ENST00000392003 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
COL6A3-204ENST00000392003 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
COL6A3-204ENST00000392003 Q6ZRX8 168 aa6.22□□□□□ -1.41
COL6A3-204ENST00000392003 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.42
COL6A3-204ENST00000392003 NDUFS5O43920 106 aa6.21□□□□□ -1.42
COL6A3-204ENST00000392003 PHF5AQ7RTV0 110 aaKnown RBP6.2□□□□□ -1.42
COL6A3-204ENST00000392003 Q8N377 158 aa6.2□□□□□ -1.42
COL6A3-204ENST00000392003 NUPR2A6NF83 97 aa6.19□□□□□ -1.42
COL6A3-204ENST00000392003 C7orf65Q6ZTY9 151 aa6.19□□□□□ -1.42
COL6A3-204ENST00000392003 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms