RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 MGAQ8IWI9 3026 aa8.36□□□□□ -1.07
KCNQ3-201ENST00000388996 LINC00476Q8WZB0 136 aa8.36□□□□□ -1.07
KCNQ3-201ENST00000388996 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
KCNQ3-201ENST00000388996 CFAP54Q96N23 3096 aa8.36□□□□□ -1.07
KCNQ3-201ENST00000388996 TYMSOSQ8TAI1 123 aa8.36□□□□□ -1.07
KCNQ3-201ENST00000388996 BCE1O60756 84 aa8.35□□□□□ -1.07
KCNQ3-201ENST00000388996 TRAV22A0A0B4J277 110 aa8.35□□□□□ -1.07
KCNQ3-201ENST00000388996 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
KCNQ3-201ENST00000388996 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
KCNQ3-201ENST00000388996 H3BPC8 53 aa8.33□□□□□ -1.08
KCNQ3-201ENST00000388996 HIVEP1P15822 2718 aa8.33□□□□□ -1.08
KCNQ3-201ENST00000388996 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
KCNQ3-201ENST00000388996 LINC00313P59037 77 aa8.33□□□□□ -1.08
KCNQ3-201ENST00000388996 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
KCNQ3-201ENST00000388996 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
KCNQ3-201ENST00000388996 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
KCNQ3-201ENST00000388996 CHD7Q9P2D1 2997 aa8.31□□□□□ -1.08
KCNQ3-201ENST00000388996 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
KCNQ3-201ENST00000388996 CRYBG3Q68DQ2 2970 aa8.29□□□□□ -1.08
KCNQ3-201ENST00000388996 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
KCNQ3-201ENST00000388996 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
KCNQ3-201ENST00000388996 RPL37AP61513 92 aaKnown RBP8.29□□□□□ -1.08
KCNQ3-201ENST00000388996 TRBV7-4A0A0J9YYF1 115 aa8.29□□□□□ -1.08
KCNQ3-201ENST00000388996 WWC2-AS2Q96NR7 200 aa8.28□□□□□ -1.08
KCNQ3-201ENST00000388996 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
KCNQ3-201ENST00000388996 KLK9Q2XQG4 91 aa8.27□□□□□ -1.09
KCNQ3-201ENST00000388996 A8MWP4 228 aa8.26□□□□□ -1.09
KCNQ3-201ENST00000388996 Q96NJ1 140 aa8.26□□□□□ -1.09
KCNQ3-201ENST00000388996 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
KCNQ3-201ENST00000388996 CSNK1G2-AS1Q8NCQ2 148 aa8.24□□□□□ -1.09
KCNQ3-201ENST00000388996 TM2D3Q9BRN9 247 aa8.24□□□□□ -1.09
KCNQ3-201ENST00000388996 J3QL48 77 aa8.23□□□□□ -1.09
KCNQ3-201ENST00000388996 IGLV8-61A0A075B6I0 122 aa8.23□□□□□ -1.09
KCNQ3-201ENST00000388996 LITAFQ99732 161 aa8.22□□□□□ -1.09
KCNQ3-201ENST00000388996 KCNQ1DNQ9H478 68 aa8.22□□□□□ -1.09
KCNQ3-201ENST00000388996 KRTAP10-11P60412 298 aa8.21□□□□□ -1.09
KCNQ3-201ENST00000388996 C5orf42Q9H799 3197 aa8.21□□□□□ -1.1
KCNQ3-201ENST00000388996 GOLGB1Q14789 3259 aaKnown RBP8.2□□□□□ -1.1
KCNQ3-201ENST00000388996 C8orf87E5RJ46 101 aa8.2□□□□□ -1.1
KCNQ3-201ENST00000388996 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
KCNQ3-201ENST00000388996 LAMA2P24043 3122 aaKnown RBP8.2□□□□□ -1.1
KCNQ3-201ENST00000388996 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
KCNQ3-201ENST00000388996 K7EIL1 84 aa8.19□□□□□ -1.1
KCNQ3-201ENST00000388996 NF1P21359 2839 aa8.18□□□□□ -1.1
KCNQ3-201ENST00000388996 RPS28P62857 69 aaKnown RBP8.18□□□□□ -1.1
KCNQ3-201ENST00000388996 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
KCNQ3-201ENST00000388996 FRYLO94915 3013 aa8.17□□□□□ -1.1
KCNQ3-201ENST00000388996 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
KCNQ3-201ENST00000388996 K7EQZ3 153 aa8.16□□□□□ -1.1
KCNQ3-201ENST00000388996 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
KCNQ3-201ENST00000388996 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
KCNQ3-201ENST00000388996 KALRNO60229 2985 aa8.15□□□□□ -1.11
KCNQ3-201ENST00000388996 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
KCNQ3-201ENST00000388996 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
KCNQ3-201ENST00000388996 PRR34Q9NV39 138 aa8.13□□□□□ -1.11
KCNQ3-201ENST00000388996 IGFL1Q6UW32 110 aa8.13□□□□□ -1.11
KCNQ3-201ENST00000388996 TRIOO75962 3097 aa8.12□□□□□ -1.11
KCNQ3-201ENST00000388996 NIPBLQ6KC79 2804 aaeCLIP8.12□□□□□ -1.11
KCNQ3-201ENST00000388996 LINC01600Q96MT4 127 aa8.12□□□□□ -1.11
KCNQ3-201ENST00000388996 A0A096LNT2 108 aa8.11□□□□□ -1.11
KCNQ3-201ENST00000388996 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
KCNQ3-201ENST00000388996 COA5Q86WW8 74 aa8.11□□□□□ -1.11
KCNQ3-201ENST00000388996 C19orf73Q9NVV2 129 aa8.11□□□□□ -1.11
KCNQ3-201ENST00000388996 PRR15Q8IV56 129 aa8.11□□□□□ -1.11
KCNQ3-201ENST00000388996 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
KCNQ3-201ENST00000388996 ZNF861PO60384 105 aa8.1□□□□□ -1.11
KCNQ3-201ENST00000388996 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
KCNQ3-201ENST00000388996 GIG44P09565 113 aaPredicted RBP8.1□□□□□ -1.11
KCNQ3-201ENST00000388996 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
KCNQ3-201ENST00000388996 DSCR10P59022 87 aa8.09□□□□□ -1.11
KCNQ3-201ENST00000388996 TENM3Q9P273 2699 aa8.09□□□□□ -1.11
KCNQ3-201ENST00000388996 C8orf17Q9NRJ1 99 aa8.08□□□□□ -1.12
KCNQ3-201ENST00000388996 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
KCNQ3-201ENST00000388996 A0A087WTM6 91 aa8.07□□□□□ -1.12
KCNQ3-201ENST00000388996 C9orf92A6NGG3 77 aa8.07□□□□□ -1.12
KCNQ3-201ENST00000388996 PDZD2O15018 2839 aa8.06□□□□□ -1.12
KCNQ3-201ENST00000388996 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
KCNQ3-201ENST00000388996 PCNTO95613 3336 aa8.05□□□□□ -1.12
KCNQ3-201ENST00000388996 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
KCNQ3-201ENST00000388996 SSBP3-AS1Q7Z2R9 100 aa8.04□□□□□ -1.12
KCNQ3-201ENST00000388996 ASH1LQ9NR48 2969 aaKnown RBP8.02□□□□□ -1.12
KCNQ3-201ENST00000388996 UQCR11O14957 56 aa8.02□□□□□ -1.13
KCNQ3-201ENST00000388996 SRRM2Q9UQ35 2752 aaKnown RBP8.02□□□□□ -1.13
KCNQ3-201ENST00000388996 CNBPP62633 177 aaKnown RBP8.02□□□□□ -1.13
KCNQ3-201ENST00000388996 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
KCNQ3-201ENST00000388996 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
KCNQ3-201ENST00000388996 KRTAP10-3P60369 221 aa8□□□□□ -1.13
KCNQ3-201ENST00000388996 IGLV7-43P04211 117 aa8□□□□□ -1.13
KCNQ3-201ENST00000388996 APLNQ9ULZ1 77 aa7.99□□□□□ -1.13
KCNQ3-201ENST00000388996 Q8N377 158 aa7.99□□□□□ -1.13
KCNQ3-201ENST00000388996 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
KCNQ3-201ENST00000388996 SPRR4Q96PI1 79 aa7.99□□□□□ -1.13
KCNQ3-201ENST00000388996 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
KCNQ3-201ENST00000388996 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
KCNQ3-201ENST00000388996 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
KCNQ3-201ENST00000388996 A0A1W2PNN7 141 aa7.98□□□□□ -1.13
KCNQ3-201ENST00000388996 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
KCNQ3-201ENST00000388996 SMR3BP02814 79 aaPredicted RBP7.98□□□□□ -1.13
KCNQ3-201ENST00000388996 ZANQ9Y493 2812 aa7.98□□□□□ -1.13
KCNQ3-201ENST00000388996 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms